Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0085g00650.t01
CDS Infomation

cds chromosome:12X:19:23086959:23089970:1 gene:VIT_19s0085g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGACTGAGCTTCAGAGTGAGTCGTTTGATTACCGGACGGAGCTTCTGTCGCCAGCG
CTGCCCGGAGAGAACGGGAGTGCGATGAGGGTGCCGTCGTGGCGAATCAATTTTGAGGAG
TTTCAGGTTGCGGAGAAACAGAAGGATTCCAATTTTGGTGTGGCGAAGCTTGTGAAGACG
ATAAGAAAGCAGAAGAAGCTCGCAGACTATTACAAGAAGCAGGGGAAGCTACTGGAAGGG
TTCAATGAAGTGGACGCCTTCACTGAATTGGGCGTCTTGCCTGGGAGTTTAACCGAGGAT
GAAATGAAGCAGCTTGCAAACAATGAGAGGCTGGCAATTCAGGCATCCAACATAGCAAAC
ATGGTTCTCTTCATAGCAAAAGTGTATGCTTCGGTTGAGAGCAGGTCACTGGCGGTGATA
GCATCCACCCTTGACTCTCTCTTGGATCTTTTATCCGGCTTTATTTTGTGGTTTACTGCT
TCTGCTATGAGAAAACCAAACCAATATCAATATCCTATTGGGAAGAAGAGGATGCAACCT
GTGGGAATCGTTGTTTTTGCATCGGTGATGGCTACTCTTGGATTACAAATATTGTTTGAA
TCTGGTCGGGAACTTATTATAAAGGCTCAACCTGACAGGGATCCTGTGAAAGAACGATGG
ATGATTGGGATAATGGTCTCAGTTACAGTGATAAAATTTGCACTCATGACATATTGTCGC
AGATTCAAGAACGAAATTATTAGGGCATATGCTCAAGATCATTTCTTTGATGTCATTACC
AACTCAATAGGTTTGGTAACTGCAGTCCTAGCCATTCACTTCTTCTGGTGGATTGATCCT
CTTGGGGCCATCCTCATAGCTCTGTATACTATGGCTACTTGGGCTAAGACGGTTATGGAG
AACGTGTGGTCATTGATTGGGCGAACAGCACCGCCGGAGTTCTTAGCAAAGCTAACATAT
CTAATATGGAACTATCACGAGGAGATCAAACATATTGACACTGTCAGGGCGTATAACTTT
GGCTCCCAATACTTTGTGGAGGTTGATATAGTTGTGCCAGAGGACATGTCTCTAACTCAA
GCGCACAACATCGGAGAGGCACTCCAAGAGAAGCTTGAGCAACTTCCGGAGGTGGAAAGA
GCCTTTGTTCATATAGACTTTGAATACACTCATAAGCCTGAGCACATGCCCAAAAAGTGT
TGA

Peptide Sequence

PEP ID

VIT_19s0085g00650.t01
PEP Infomation

pep chromosome:12X:19:23086959:23089970:1 gene:VIT_19s0085g00650 transcript:VIT_19s0085g00650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQTELQSESFDYRTELLSPALPGENGSAMRVPSWRINFEEFQVAEKQKDSNFGVAKLVKT
IRKQKKLADYYKKQGKLLEGFNEVDAFTELGVLPGSLTEDEMKQLANNERLAIQASNIAN
MVLFIAKVYASVESRSLAVIASTLDSLLDLLSGFILWFTASAMRKPNQYQYPIGKKRMQP
VGIVVFASVMATLGLQILFESGRELIIKAQPDRDPVKERWMIGIMVSVTVIKFALMTYCR
RFKNEIIRAYAQDHFFDVITNSIGLVTAVLAIHFFWWIDPLGAILIALYTMATWAKTVME
NVWSLIGRTAPPEFLAKLTYLIWNYHEEIKHIDTVRAYNFGSQYFVEVDIVVPEDMSLTQ
AHNIGEALQEKLEQLPEVERAFVHIDFEYTHKPEHMPKKC

Transcript Sequence

Transcript ID

VIT_19s0085g00650.t01
Transcript Infomation

cdna chromosome:12X:19:23086959:23089970:1 gene:VIT_19s0085g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGGCGTCCGATCATCAAAACCAACATTCCCCATGCTTCCTTGATTCAATGAAGCTTCA
TTGGATCCACCCATCATTTTTTTTGGTCTATATAAGGACCAGAAGGTGTAGCTGTCCCTC
TTCCAAGAAAGGAAAAGGAAAAGTATGCAGACTGAGCTTCAGAGTGAGTCGTTTGATTAC
CGGACGGAGCTTCTGTCGCCAGCGCTGCCCGGAGAGAACGGGAGTGCGATGAGGGTGCCG
TCGTGGCGAATCAATTTTGAGGAGTTTCAGGTTGCGGAGAAACAGAAGGATTCCAATTTT
GGTGTGGCGAAGCTTGTGAAGACGATAAGAAAGCAGAAGAAGCTCGCAGACTATTACAAG
AAGCAGGGGAAGCTACTGGAAGGGTTCAATGAAGTGGACGCCTTCACTGAATTGGGCGTC
TTGCCTGGGAGTTTAACCGAGGATGAAATGAAGCAGCTTGCAAACAATGAGAGGCTGGCA
ATTCAGGCATCCAACATAGCAAACATGGTTCTCTTCATAGCAAAAGTGTATGCTTCGGTT
GAGAGCAGGTCACTGGCGGTGATAGCATCCACCCTTGACTCTCTCTTGGATCTTTTATCC
GGCTTTATTTTGTGGTTTACTGCTTCTGCTATGAGAAAACCAAACCAATATCAATATCCT
ATTGGGAAGAAGAGGATGCAACCTGTGGGAATCGTTGTTTTTGCATCGGTGATGGCTACT
CTTGGATTACAAATATTGTTTGAATCTGGTCGGGAACTTATTATAAAGGCTCAACCTGAC
AGGGATCCTGTGAAAGAACGATGGATGATTGGGATAATGGTCTCAGTTACAGTGATAAAA
TTTGCACTCATGACATATTGTCGCAGATTCAAGAACGAAATTATTAGGGCATATGCTCAA
GATCATTTCTTTGATGTCATTACCAACTCAATAGGTTTGGTAACTGCAGTCCTAGCCATT
CACTTCTTCTGGTGGATTGATCCTCTTGGGGCCATCCTCATAGCTCTGTATACTATGGCT
ACTTGGGCTAAGACGGTTATGGAGAACGTGTGGTCATTGATTGGGCGAACAGCACCGCCG
GAGTTCTTAGCAAAGCTAACATATCTAATATGGAACTATCACGAGGAGATCAAACATATT
GACACTGTCAGGGCGTATAACTTTGGCTCCCAATACTTTGTGGAGGTTGATATAGTTGTG
CCAGAGGACATGTCTCTAACTCAAGCGCACAACATCGGAGAGGCACTCCAAGAGAAGCTT
GAGCAACTTCCGGAGGTGGAAAGAGCCTTTGTTCATATAGACTTTGAATACACTCATAAG
CCTGAGCACATGCCCAAAAAGTGTTGATCAGGAAGGCTTTGAATCTATTAGGGTTTGATT
ATTTGTTGAGGCCCATAAAAGGAATGTGTAGTAGTTTGCTATTTGCCTTGTGTAAGGGAT
TGATAATCCATTAGGTCTTAGGGTTTTATATTTGTGAGTGAAGAAATGATTCAGAGACAT
TTTGTTTTCGATGTCCAAATTACTTTTCTGATTTTTGTAACCCTAACCCTAAACCAAATA
AAATGTGGGT