Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0085g00020.t01
CDS Infomation

cds chromosome:12X:19:22290826:22301656:-1 gene:VIT_19s0085g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAATGATGGGAAAGGAGAGAGGGATGGGGAAGAAGAAGAAGAGGCAGAAGATTATC
CTGCCGCCGGATCTCCCACCAGAGATTCCCGAGGATGAAGTCGAAGTTTCCGATGAGGAT
TTGCAGTTTTTCGATGAGAATCGAGACTACGCCGGCTTCGTTTCCACTTTGGACACTCAT
TCGATCACTAGGCATGTTTCACGTGTTGCCAATGTGAAAGAAGATGCTTTGGAGGCTTTA
TATGAGAGGCGGTTGAAGAAGAAGGCGGCAGAGAAACAGAAAGAGGAGAGTGCGCTTCAA
GTTGATCCTGTAGATGCCCTTCCTGTCAAAACCTTAGATGGAGAACTATACTACAGGACA
GCACCAAAGAAACCAAAAGATTCTGAAAATGCAGCTGATAAATATGAAGCAGATGGGGAG
GATGGAAATGAAGGTGTAGATAAAAGTATAGTGAAGCTGACAAAAGCAGAACGGAGGGCA
AAGCTTAAGAAGAGTAAGAAAGAAGCAAAGAAACAAGGGAAGGAACTTGATAAAACAGAG
GATGTGCAACAAACACCACAAGCTGCTGCGTTGGCTGAGGTAAAACAAGATCTCACAGCT
GAAGAAACATTTGAAAGTAAGAAGCGCAAACTAGCAGAGTTGGGAATGGCACTGCTTGCA
GATCCAGAAGCTAATATTAAAACCTTAAAAGAGATGTTGCAAATCTCTAAAGATGATGAT
CAGGCTATTGTCAAGCTTGCGCTGCTGTCTTTGTTGGCTGTTTTCAAAGACATTATTCCT
GGCTACCGTATCAGGCTTCCTACTGAAAAGGAGCTGGAGATGACTGTATCAAAGGAAGTT
AAAAAGAAGCGGTACTATGAATCCACACTTTTATCTACATACAAGGCATATCTGCAGAAG
TTGATGGCATTGGAACGGCAGGCCTCATTTCAGCATATTGTTTATCGCTGTATCTGTACT
TTGCTAGATGCAGTTCCCCACTTCAACTTCCGTGAGAGCTTGTTAGCTGCAGTTATAAAA
AACATAGGCTCCTCCGATGATGTAGTAAGGAAACTTTGTTGTGCTACTGTTAAATCACTT
TTTACCAACGATGGGAAACATGGAGGTGAAGCTACTGTGGAGGCTGTTCAATTGATTGCA
GATCATGTGAAAGCTCATGATTGCCAATTGCACCCTGATTCCATTGAGGTTTTCATGTAT
TTGACGTTTGATGAAGATCTTGGGAGGCCTGAAAACCCAAATGAGGATAATAAAGTCAAA
AGCAAGAAAAATAAGAAGCGAAAGAACCGTGAGGAGTCAGGTGAGCTGCAAGAGAGAGAC
AAAAAGAAAAATAGGCAAGAATTGGTCACAAAGATGAGAGAAGAGGTCAATGCCGACTTT
AGGGCTGCTTCTTTTGCCCCAGATGTTAAGGAGCGGAGAATGATGCAGTCGGAGGCACTT
TCTGCTGTATTTGAGACATACTTCCGCATCTTGAAGCATAGTATGCGGCAAATTTCAGTC
AGATCTGAAGAGAATGGGAGTTCATTACCTGGTGCATCTGGGAATCATCCCCTACTTGTT
CCATGTTTGATAGGATTAGGAAAATTCTCTCACCTGATTGACTTAGATTTTATGGGCGAT
CTCATGAACTGTCTGAGAAAGCTTGCCTGTGGCAGCAGCAACTCTGATGGTTCCTGCAAT
AAACTTTTGACTGTATCTGAACGTCTTCGATGCTGCATTGTTGCCTTCAAAGTGATGAGG
AACAATCTTGAGGCCTTGAATGTTGATTTACAGGAATTCTTCATCCAGCTTTACAATCTT
AGTATTGAGTACAGGCCCGGAAGAGATCAGGGTGAGGTGTTAGCCGAAGCACTGAAGATC
ATGCTGTGTGATGATAGACAGCATGACATGCAAAAGGCTGCTGCTTTTATAAAACGATTG
GCTACATTCTCGTTATGCTTTGGGTCTGCGGAGTCCATGGCTGCCTTGGTTACTTTAAAG
CATCTTCTTCAGAAGAATGTTAAGTGCCGGCATCTGTTGGAAAATGATGCAGGAGGTTGT
TCAGTTTTGGGTTCCATCGTGAAATATCAGCCATACGCCTCTGACCCAAGCCAAAGTGGT
GCACTCGCCTCAGTCCTTTGGGAACTCAATCTTCTATCCAAGCACTACCACCCAGCTGTT
TCAACAATGGCTTCAAACGTCTCAGGCATGAGCACTGGTCACAACCAAGTCTATCTTGCC
ACGGTTTCTCCTCAACAAGCCTTTGCAGACTTATCACTTGAACACGAGTCATTCATCAAT
CCAAAGAACATCGTCATGAAATCAAATCATAAGAGAAAACGAGGAAGCGGGTCATCTGGA
GCAGCTAGCATCAACCCAACCCCAGATGCCGCTACTCCAATCGATGAAGATGGGTTGAGG
AAGAAACTTTCAGAGCATTTCACAATTCTGCACGACATCAAGGAGAACGAGAGATTAAGG
GGTGAGTTAGATCGTGTAACACTATCCCTGCAGGTATACGAAGAACATAAGAATCGAAAG
AAGAGAAAACATGCCTCAAAACCCAAGAAAAATGCAGAAAAAACTGCCAGTTGA

Peptide Sequence

PEP ID

VIT_19s0085g00020.t01
PEP Infomation

pep chromosome:12X:19:22290826:22301656:-1 gene:VIT_19s0085g00020 transcript:VIT_19s0085g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGMMGKERGMGKKKKRQKIILPPDLPPEIPEDEVEVSDEDLQFFDENRDYAGFVSTLDTH
SITRHVSRVANVKEDALEALYERRLKKKAAEKQKEESALQVDPVDALPVKTLDGELYYRT
APKKPKDSENAADKYEADGEDGNEGVDKSIVKLTKAERRAKLKKSKKEAKKQGKELDKTE
DVQQTPQAAALAEVKQDLTAEETFESKKRKLAELGMALLADPEANIKTLKEMLQISKDDD
QAIVKLALLSLLAVFKDIIPGYRIRLPTEKELEMTVSKEVKKKRYYESTLLSTYKAYLQK
LMALERQASFQHIVYRCICTLLDAVPHFNFRESLLAAVIKNIGSSDDVVRKLCCATVKSL
FTNDGKHGGEATVEAVQLIADHVKAHDCQLHPDSIEVFMYLTFDEDLGRPENPNEDNKVK
SKKNKKRKNREESGELQERDKKKNRQELVTKMREEVNADFRAASFAPDVKERRMMQSEAL
SAVFETYFRILKHSMRQISVRSEENGSSLPGASGNHPLLVPCLIGLGKFSHLIDLDFMGD
LMNCLRKLACGSSNSDGSCNKLLTVSERLRCCIVAFKVMRNNLEALNVDLQEFFIQLYNL
SIEYRPGRDQGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESMAALVTLK
HLLQKNVKCRHLLENDAGGCSVLGSIVKYQPYASDPSQSGALASVLWELNLLSKHYHPAV
STMASNVSGMSTGHNQVYLATVSPQQAFADLSLEHESFINPKNIVMKSNHKRKRGSGSSG
AASINPTPDAATPIDEDGLRKKLSEHFTILHDIKENERLRGELDRVTLSLQVYEEHKNRK
KRKHASKPKKNAEKTAS

Transcript Sequence

Transcript ID

VIT_19s0085g00020.t01
Transcript Infomation

cdna chromosome:12X:19:22290826:22301656:-1 gene:VIT_19s0085g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCAAGCTCATCAGTTCTCTCCATCTCAGAATCTTCTTCTCGATTTTTCTCGAAGCTTC
CATCTAGATTTCTTTCATGGGAATGATGGGAAAGGAGAGAGGGATGGGGAAGAAGAAGAA
GAGGCAGAAGATTATCCTGCCGCCGGATCTCCCACCAGAGATTCCCGAGGATGAAGTCGA
AGTTTCCGATGAGGATTTGCAGTTTTTCGATGAGAATCGAGACTACGCCGGCTTCGTTTC
CACTTTGGACACTCATTCGATCACTAGGCATGTTTCACGTGTTGCCAATGTGAAAGAAGA
TGCTTTGGAGGCTTTATATGAGAGGCGGTTGAAGAAGAAGGCGGCAGAGAAACAGAAAGA
GGAGAGTGCGCTTCAAGTTGATCCTGTAGATGCCCTTCCTGTCAAAACCTTAGATGGAGA
ACTATACTACAGGACAGCACCAAAGAAACCAAAAGATTCTGAAAATGCAGCTGATAAATA
TGAAGCAGATGGGGAGGATGGAAATGAAGGTGTAGATAAAAGTATAGTGAAGCTGACAAA
AGCAGAACGGAGGGCAAAGCTTAAGAAGAGTAAGAAAGAAGCAAAGAAACAAGGGAAGGA
ACTTGATAAAACAGAGGATGTGCAACAAACACCACAAGCTGCTGCGTTGGCTGAGGTAAA
ACAAGATCTCACAGCTGAAGAAACATTTGAAAGTAAGAAGCGCAAACTAGCAGAGTTGGG
AATGGCACTGCTTGCAGATCCAGAAGCTAATATTAAAACCTTAAAAGAGATGTTGCAAAT
CTCTAAAGATGATGATCAGGCTATTGTCAAGCTTGCGCTGCTGTCTTTGTTGGCTGTTTT
CAAAGACATTATTCCTGGCTACCGTATCAGGCTTCCTACTGAAAAGGAGCTGGAGATGAC
TGTATCAAAGGAAGTTAAAAAGAAGCGGTACTATGAATCCACACTTTTATCTACATACAA
GGCATATCTGCAGAAGTTGATGGCATTGGAACGGCAGGCCTCATTTCAGCATATTGTTTA
TCGCTGTATCTGTACTTTGCTAGATGCAGTTCCCCACTTCAACTTCCGTGAGAGCTTGTT
AGCTGCAGTTATAAAAAACATAGGCTCCTCCGATGATGTAGTAAGGAAACTTTGTTGTGC
TACTGTTAAATCACTTTTTACCAACGATGGGAAACATGGAGGTGAAGCTACTGTGGAGGC
TGTTCAATTGATTGCAGATCATGTGAAAGCTCATGATTGCCAATTGCACCCTGATTCCAT
TGAGGTTTTCATGTATTTGACGTTTGATGAAGATCTTGGGAGGCCTGAAAACCCAAATGA
GGATAATAAAGTCAAAAGCAAGAAAAATAAGAAGCGAAAGAACCGTGAGGAGTCAGGTGA
GCTGCAAGAGAGAGACAAAAAGAAAAATAGGCAAGAATTGGTCACAAAGATGAGAGAAGA
GGTCAATGCCGACTTTAGGGCTGCTTCTTTTGCCCCAGATGTTAAGGAGCGGAGAATGAT
GCAGTCGGAGGCACTTTCTGCTGTATTTGAGACATACTTCCGCATCTTGAAGCATAGTAT
GCGGCAAATTTCAGTCAGATCTGAAGAGAATGGGAGTTCATTACCTGGTGCATCTGGGAA
TCATCCCCTACTTGTTCCATGTTTGATAGGATTAGGAAAATTCTCTCACCTGATTGACTT
AGATTTTATGGGCGATCTCATGAACTGTCTGAGAAAGCTTGCCTGTGGCAGCAGCAACTC
TGATGGTTCCTGCAATAAACTTTTGACTGTATCTGAACGTCTTCGATGCTGCATTGTTGC
CTTCAAAGTGATGAGGAACAATCTTGAGGCCTTGAATGTTGATTTACAGGAATTCTTCAT
CCAGCTTTACAATCTTAGTATTGAGTACAGGCCCGGAAGAGATCAGGGTGAGGTGTTAGC
CGAAGCACTGAAGATCATGCTGTGTGATGATAGACAGCATGACATGCAAAAGGCTGCTGC
TTTTATAAAACGATTGGCTACATTCTCGTTATGCTTTGGGTCTGCGGAGTCCATGGCTGC
CTTGGTTACTTTAAAGCATCTTCTTCAGAAGAATGTTAAGTGCCGGCATCTGTTGGAAAA
TGATGCAGGAGGTTGTTCAGTTTTGGGTTCCATCGTGAAATATCAGCCATACGCCTCTGA
CCCAAGCCAAAGTGGTGCACTCGCCTCAGTCCTTTGGGAACTCAATCTTCTATCCAAGCA
CTACCACCCAGCTGTTTCAACAATGGCTTCAAACGTCTCAGGCATGAGCACTGGTCACAA
CCAAGTCTATCTTGCCACGGTTTCTCCTCAACAAGCCTTTGCAGACTTATCACTTGAACA
CGAGTCATTCATCAATCCAAAGAACATCGTCATGAAATCAAATCATAAGAGAAAACGAGG
AAGCGGGTCATCTGGAGCAGCTAGCATCAACCCAACCCCAGATGCCGCTACTCCAATCGA
TGAAGATGGGTTGAGGAAGAAACTTTCAGAGCATTTCACAATTCTGCACGACATCAAGGA
GAACGAGAGATTAAGGGGTGAGTTAGATCGTGTAACACTATCCCTGCAGGTATACGAAGA
ACATAAGAATCGAAAGAAGAGAAAACATGCCTCAAAACCCAAGAAAAATGCAGAAAAAAC
TGCCAGTTGATGAAGTGATGTTTTCAGCTCAAGAAAATTTTGAAGGCTTAAAGGGTAGAT
TGATTCTTGTGTAATCTTTGCAGTTTGTATCGTTCTTTCCCAATTTTGAGTAGGGCAATT
TTGGGTCAAAATTTATGGGAGTGGAAAAGGCTATTTACAGGTTGGTAAACAGTCCATATT
GGCATGAAAGGAGGAGATGAGTTATCATTGTTTTGATTTAACAAATTTATTGTTTTCTTG
AAAGGGCAAAA