Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0027g00780.t01
CDS Infomation

cds chromosome:12X:19:20058599:20062922:1 gene:VIT_19s0027g00780 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6H4T6]
Sequence

ATGGCATTAGTTTCACGTCAAAGCAAAAAGTGGGGCCCAGGCTGTAGAGCTTTTAGCACT
CAGGCTGCAACAACTGCAAGTGCTTCACAGCCTCCACCACCTCCTCCACCTCCAGAGAAA
ACCCATTTTGGTGGCCTGAAAGATGAGGACCGCATCTTCACCAATCTTTATGGGTTGCAT
GACCCATTTCTTAAAGGTGCCATGAAAAGGGGCGACTGGTACAGGACCAAAGACATAGTA
CTCAAGGGTTCTGATTGGATTGTAAATGAAATGAAGAAATCTGGTCTCCGTGGACGTGGT
GGTGCCGGTTTTCCATCTGGCCTCAAATGGTCCTTCATGCCAAAAGTATCTGATGGCCGT
CCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCTGGAACATGTAAAGACAGAGAA
ATAATGCGGCATGATCCACACAAACTATTAGAGGGCTGCTTGATTGCTGGGGTTGGAATG
AGGGCTACTACCGCTTACATCTACATAAGGGGTGAATATGTGAATGAACGTAAAAACCTT
GAAAGGGCCAGGAAAGAAGCTTATGAAGCTGGATTACTGGGCAAGAATGCATGTGGATCT
GGTTATGATTTTGATGTCCATATCCATTATGGTGCTGGTGCTTATATTTGTGGTGAGGAA
ACAGCACTTTTGGAGAGTCTTGAAGGGAAACAAGGGAAGCCGAGATTGAAGCCTCCCTTC
CCAGCTAATGCAGGATTATATGGTTGTCCCACCACTGTTACAAATGTGGAAACTGTGGCT
GTTTCACCCACCATCTTAAGGCGTGGACCAGAGTGGTTTGCTGGTTTTGGAAGGAAGAAC
AATGCTGGGACAAAATTGTATTGTGTTTCAGGTCATGTGAACAAACCTTGCACTGTTGAA
GAGGAGATGAGTATACCATTAAAGGAACTGATAGAGAGGCACTGTGGAGGTGTTAGAGGT
GGATGGGACAATTTACTTGCAGTAATACCTGGGGGTTCATCCGTTCCTCTCCTTCCCAAG
CACATATGTGATGATGTCCTGATGGATTATGATGCACTCAAGGCTGTCCAGTCGGGGTTG
GGGACTGCAGCTGTGATCGTGATGGATAAGTCTACTGATGTCGTGGATGCAATTGCAAGG
CTGTCTTACTTTTACAAGCATGAGAGCTGTGGACAGTGTACACCATGCAGGGAGGGAACA
GGTTGGCTATTGATGATGATGGAAAGATTGAAAGTTGGGAATGCAAACTTGGAGGAGATT
GACATGCTTCAGGAAGTGACAAAGCAGATTGAAGGGCACACAATCTGTGCATTGGGTGAT
GCAGCTGCTTGGCCTGTTCAGGGTCTTATCAGGCATTTTAGACCAGAACTTGAGAGAAGG
ATCAGGGAGCGTGCGGAGAGGGAGTTGCTGGAAGTGGCCGCTGCTTAA

Peptide Sequence

PEP ID

VIT_19s0027g00780.t01
PEP Infomation

pep chromosome:12X:19:20058599:20062922:1 gene:VIT_19s0027g00780 transcript:VIT_19s0027g00780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6H4T6]
Sequence

MALVSRQSKKWGPGCRAFSTQAATTASASQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLH
DPFLKGAMKRGDWYRTKDIVLKGSDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGR
PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATTAYIYIRGEYVNERKNL
ERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF
PANAGLYGCPTTVTNVETVAVSPTILRRGPEWFAGFGRKNNAGTKLYCVSGHVNKPCTVE
EEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL
GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLLMMMERLKVGNANLEEI
DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLEVAAA

Transcript Sequence

Transcript ID

VIT_19s0027g00780.t01
Transcript Infomation

cdna chromosome:12X:19:20058599:20062922:1 gene:VIT_19s0027g00780 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6H4T6]
Sequence

GGCACCCATCAGGGGCATTCTTACTCTGCAAAGAATGGCATTAGTTTCACGTCAAAGCAA
AAAGTGGGGCCCAGGCTGTAGAGCTTTTAGCACTCAGGCTGCAACAACTGCAAGTGCTTC
ACAGCCTCCACCACCTCCTCCACCTCCAGAGAAAACCCATTTTGGTGGCCTGAAAGATGA
GGACCGCATCTTCACCAATCTTTATGGGTTGCATGACCCATTTCTTAAAGGTGCCATGAA
AAGGGGCGACTGGTACAGGACCAAAGACATAGTACTCAAGGGTTCTGATTGGATTGTAAA
TGAAATGAAGAAATCTGGTCTCCGTGGACGTGGTGGTGCCGGTTTTCCATCTGGCCTCAA
ATGGTCCTTCATGCCAAAAGTATCTGATGGCCGTCCTTCCTATCTTGTTGTCAATGCTGA
TGAAAGTGAACCTGGAACATGTAAAGACAGAGAAATAATGCGGCATGATCCACACAAACT
ATTAGAGGGCTGCTTGATTGCTGGGGTTGGAATGAGGGCTACTACCGCTTACATCTACAT
AAGGGGTGAATATGTGAATGAACGTAAAAACCTTGAAAGGGCCAGGAAAGAAGCTTATGA
AGCTGGATTACTGGGCAAGAATGCATGTGGATCTGGTTATGATTTTGATGTCCATATCCA
TTATGGTGCTGGTGCTTATATTTGTGGTGAGGAAACAGCACTTTTGGAGAGTCTTGAAGG
GAAACAAGGGAAGCCGAGATTGAAGCCTCCCTTCCCAGCTAATGCAGGATTATATGGTTG
TCCCACCACTGTTACAAATGTGGAAACTGTGGCTGTTTCACCCACCATCTTAAGGCGTGG
ACCAGAGTGGTTTGCTGGTTTTGGAAGGAAGAACAATGCTGGGACAAAATTGTATTGTGT
TTCAGGTCATGTGAACAAACCTTGCACTGTTGAAGAGGAGATGAGTATACCATTAAAGGA
ACTGATAGAGAGGCACTGTGGAGGTGTTAGAGGTGGATGGGACAATTTACTTGCAGTAAT
ACCTGGGGGTTCATCCGTTCCTCTCCTTCCCAAGCACATATGTGATGATGTCCTGATGGA
TTATGATGCACTCAAGGCTGTCCAGTCGGGGTTGGGGACTGCAGCTGTGATCGTGATGGA
TAAGTCTACTGATGTCGTGGATGCAATTGCAAGGCTGTCTTACTTTTACAAGCATGAGAG
CTGTGGACAGTGTACACCATGCAGGGAGGGAACAGGTTGGCTATTGATGATGATGGAAAG
ATTGAAAGTTGGGAATGCAAACTTGGAGGAGATTGACATGCTTCAGGAAGTGACAAAGCA
GATTGAAGGGCACACAATCTGTGCATTGGGTGATGCAGCTGCTTGGCCTGTTCAGGGTCT
TATCAGGCATTTTAGACCAGAACTTGAGAGAAGGATCAGGGAGCGTGCGGAGAGGGAGTT
GCTGGAAGTGGCCGCTGCTTAAGTATTTTATGCAGGGAAACACCGGAACTGGTGGGTAAT
GTGGAATAAAATGAAGAACAACAAATGTTAGGAGCGGAAGGCAACTCCAGGCATCTGGCT
GTCGAATTGGTATTTCGTTTATTTCCTCCCCTGTATAACCTCTGTGACTCACTCTTGGAG
TGATTAGCACTACTCCATAATGTTGCAAATCGGGGATAATTTGAGTTATTTCTTCTGTTT
GTGATTATACCACCATTGAAACTTGCCTTTCGACTCATTTTGAGGAACTTTGCTCTAGTA
ATTTGTTTTTCTTTATGTGAAATGCTGATCATGTTTCTGTTTTATCAATAAAACATAGTT
GTATGTT