Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0027g00600.t01
CDS Infomation

cds chromosome:12X:19:19652434:19660706:1 gene:VIT_19s0027g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGGTAATAGCCTGCCATCTCTGGGTCGTGTGAAACTCTGCGATCTGATTGCTTGT
GAAGGCCTTCCTTCTGATTCTTATAAGTTATCTGTGTCCACTTTGTCACAATCACTAGCT
CAGTATTCTGCTGCTATCATTCAATTTCCTTCAAGTGATGGAGCCCTTCTAAGGTCTGGT
TTGGATTCTGCTCACCTCTACTTCCATCAAAGAGCATCTTACCCAGCTGCAGATATGATC
CATAACAATGAATCTCGTGAGTGGTGCAAGACCTCTGGTTATTATGCAGATCCGCAACAG
TGGCAAGAAACCTATGATTTCAGACCAGGCTTAACTCCTCCAGAATCAAATAGTGGTTTG
GAATTCCCTCCAGCTGGTTTGCCAGATATATTTTCTCTGCTTGGCAAAGCAGCTCGGGAT
ATTCTGGATGCTATCAGCTTCTATTTGAACTTGCGTAGCTCGCCTTTTACTGAAATACTC
GATAATGTTCCCTTGAGAAGTCGTGAAATATCATCTTCTGTACTGTCTGTTTGCTGTTAT
GGAAGGCCATCCTTTCAGGGACCACAACATCATAATTTAACTACCCAAGAGGATGGCCAA
TTAGTTATGTTTTCTGATCATGAGCACCAAGTTGATAAAAGCCTGATAACACTTGTCAAG
TCAGATAAAGCAGGCTTACATGTAAGAGACTTTCATGGTCGTTGGGTTCTTGTGGATGGG
GATCTTGGTCCCCAAGAAGCCATTGTTTATCCTGGACTTGCACTCTACCAGGCAACTGCT
GGCTATGTTGGCCCTGCACTACACCGAACAGAGATTAGTAATATGCAGGGTAATATGTAT
GGACGATGCTCTCTAGCTTTCAAACTCATGCCCAAATCCATGACCAGTCTCAATTGTTCG
GAGATGAGGGCAGCTGGTCATGGGGTTGAAGCTCAGTTTCAGCTTCCAGTACCAGTGGAT
GACTTTATGCAGAGATCCCACCCCACTGAGCAACTTTTTAACAGAAACAATTTCCCAAGT
TTCAATTTTCCTACAGCCCAAGATGGATCTATGAAGCCCTTGATGAGGAGGAGGAAGAAT
AATTCTAGATGCAAACCTCTCCCACCTTCCAAGAGGTTACGACTAGAGGCACAAAGAGTT
CTCAAGGAGAGAGTTCAAGATATTGCAGATAAGAAGGGCATCAAGTTGAGGTTCTGTAAT
CTGAAGGAATGTGAGAGTCACATCCATACACTTGACAGTCCTTGTGCCAATACAAGAATG
GAGATCGGGTGGCCACCAGGGGTTCCATTTGTTCATCCTCATGATCTACCAAACAAGGCA
AAGATTGGTTTTCTTGAAGCATATGAACCTGGTTGGACAGCCACTCATGATATGGAGTTA
AGTCTAATAGAACCTGGACAGGCCAGTCAACACTCGGCTAACTGTAACTGTAACTCTCCT
GTTCAAGTTCTATATACACATGAGAACACATTCTTTTGGACCAAACTTTTGTTCTGTGAT
TAA

Peptide Sequence

PEP ID

VIT_19s0027g00600.t01
PEP Infomation

pep chromosome:12X:19:19652434:19660706:1 gene:VIT_19s0027g00600 transcript:VIT_19s0027g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGNSLPSLGRVKLCDLIACEGLPSDSYKLSVSTLSQSLAQYSAAIIQFPSSDGALLRSG
LDSAHLYFHQRASYPAADMIHNNESREWCKTSGYYADPQQWQETYDFRPGLTPPESNSGL
EFPPAGLPDIFSLLGKAARDILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCY
GRPSFQGPQHHNLTTQEDGQLVMFSDHEHQVDKSLITLVKSDKAGLHVRDFHGRWVLVDG
DLGPQEAIVYPGLALYQATAGYVGPALHRTEISNMQGNMYGRCSLAFKLMPKSMTSLNCS
EMRAAGHGVEAQFQLPVPVDDFMQRSHPTEQLFNRNNFPSFNFPTAQDGSMKPLMRRRKN
NSRCKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCNLKECESHIHTLDSPCANTRM
EIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTATHDMELSLIEPGQASQHSANCNCNSP
VQVLYTHENTFFWTKLLFCD

Transcript Sequence

Transcript ID

VIT_19s0027g00600.t01
Transcript Infomation

cdna chromosome:12X:19:19652434:19660706:1 gene:VIT_19s0027g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAATGGTTCGGGTAAGGTGCTTTGTAGAGTTTTTGGAAATTTCTTGTGAAGAGATTT
CAGGGTTTATTATTTTATTTTATAAATTTTTTAAGACATATTTTGGGATGTTTTACACTC
AATCAGCCTCTGTTTTCTTTATTTTTCTGGAGGTAGATCTTTCCATCATAGTCCTAAACC
TCTTTTTAAGATTAAAGCTTGACCTAAACACCCGAAAGCCTATAGTATTTGCAATCCTCA
AAATTGTTTATCCAAAATACAGGTTTTGTTTCATAAGGTTTTTGAAATTAGTTCTCAAAA
TCAAGACAGTATATATAATCTATTATACTCTCAAATAGTTGTCACTTGAAAGGGTTCCAT
GGCAGGTAATAGCCTGCCATCTCTGGGTCGTGTGAAACTCTGCGATCTGATTGCTTGTGA
AGGCCTTCCTTCTGATTCTTATAAGTTATCTGTGTCCACTTTGTCACAATCACTAGCTCA
GTATTCTGCTGCTATCATTCAATTTCCTTCAAGTGATGGAGCCCTTCTAAGGTCTGGTTT
GGATTCTGCTCACCTCTACTTCCATCAAAGAGCATCTTACCCAGCTGCAGATATGATCCA
TAACAATGAATCTCGTGAGTGGTGCAAGACCTCTGGTTATTATGCAGATCCGCAACAGTG
GCAAGAAACCTATGATTTCAGACCAGGCTTAACTCCTCCAGAATCAAATAGTGGTTTGGA
ATTCCCTCCAGCTGGTTTGCCAGATATATTTTCTCTGCTTGGCAAAGCAGCTCGGGATAT
TCTGGATGCTATCAGCTTCTATTTGAACTTGCGTAGCTCGCCTTTTACTGAAATACTCGA
TAATGTTCCCTTGAGAAGTCGTGAAATATCATCTTCTGTACTGTCTGTTTGCTGTTATGG
AAGGCCATCCTTTCAGGGACCACAACATCATAATTTAACTACCCAAGAGGATGGCCAATT
AGTTATGTTTTCTGATCATGAGCACCAAGTTGATAAAAGCCTGATAACACTTGTCAAGTC
AGATAAAGCAGGCTTACATGTAAGAGACTTTCATGGTCGTTGGGTTCTTGTGGATGGGGA
TCTTGGTCCCCAAGAAGCCATTGTTTATCCTGGACTTGCACTCTACCAGGCAACTGCTGG
CTATGTTGGCCCTGCACTACACCGAACAGAGATTAGTAATATGCAGGGTAATATGTATGG
ACGATGCTCTCTAGCTTTCAAACTCATGCCCAAATCCATGACCAGTCTCAATTGTTCGGA
GATGAGGGCAGCTGGTCATGGGGTTGAAGCTCAGTTTCAGCTTCCAGTACCAGTGGATGA
CTTTATGCAGAGATCCCACCCCACTGAGCAACTTTTTAACAGAAACAATTTCCCAAGTTT
CAATTTTCCTACAGCCCAAGATGGATCTATGAAGCCCTTGATGAGGAGGAGGAAGAATAA
TTCTAGATGCAAACCTCTCCCACCTTCCAAGAGGTTACGACTAGAGGCACAAAGAGTTCT
CAAGGAGAGAGTTCAAGATATTGCAGATAAGAAGGGCATCAAGTTGAGGTTCTGTAATCT
GAAGGAATGTGAGAGTCACATCCATACACTTGACAGTCCTTGTGCCAATACAAGAATGGA
GATCGGGTGGCCACCAGGGGTTCCATTTGTTCATCCTCATGATCTACCAAACAAGGCAAA
GATTGGTTTTCTTGAAGCATATGAACCTGGTTGGACAGCCACTCATGATATGGAGTTAAG
TCTAATAGAACCTGGACAGGCCAGTCAACACTCGGCTAACTGTAACTGTAACTCTCCTGT
TCAAGTTCTATATACACATGAGAACACATTCTTTTGGACCAAACTTTTGTTCTGTGATTA
A