Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0027g00450.t01
CDS Infomation

cds chromosome:12X:19:19293615:19296054:1 gene:VIT_19s0027g00450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAATCCTGGTGAATGCAATGTCTCCAATTACAAGCCCATCTCCAGAAAATGCGAGA
AAGGTTTGTGGATTCTTTTCCCAGGTTCCTAATCTCCATACCCTTTCACTGAACAAGGGT
TTTTCTAGGGTTTTGGCATCTACCCAGATCACCATTTCTCCTAAGGACAATGTTTTCACA
CTCCCCAATTGGAGGTCTGGAAAGAACGACCCAAGAACTAGAGACCTCAGGCTCAATGAT
GCTTTTTTGTATTTGGAGTATATGATAGGGAAGGGACACAAGCCCGATGGAGGACAAGCT
ACTCAGCTCATGTATGAGCTCTGCAAATCAAATAAGATGAGGAAAGCAACTAAGGTGATG
GAGTTGATGATCGGTTCAGGTACCACTCCAGATCCTGCTTCTTGTACCTTCTTGGTGAAT
AATCTGTGTAAAAGAGGGAATGTTGGGTATGCAATGCAATTAGTTGAAAAAATGGAGGAA
TATGGATATCCAACCAATACTGTTACCTATAATTCTCTTGTTAGGGGGCTTTGTATGCAT
GGAAACTTGAGTCAGAGCTTGCAAATTTTGGATAAATTTATGAAGAAGGGGTTGGTTCCA
AACGTGTTCACATACTCATTCTTGCTTGAAGCTGCGTATAAGGAGAGAGGGGCTGATGAA
GCCATAAGGCTCTTGGATGAGATAGTTGCTAAGGGTGGGAAGCCTAATCTGGTTAGCTAC
AATGTTTTGTTAACTGGATTGTGCAAGGAAGGCAGAACAGAAGAGGCAATGCAGTTCTTT
AGGGATTTGCCATCTAAGGGGTTCAGTCCGAATGTTGTGAGCTATAATATTTTGTTAAGG
AGTTTGTGCTACGAGGGGCGATGGGAAAAGGCAAAGGAGCTTCTGGCTGAGATGGATGGC
GGGGAACGTTCCCCATCCATAGTTACATTCAACATATTGATTGGTTCGCTTGCCCTTCAT
GGACAAACTGATCAGGCTCTTGAGGTTTTAGATGATATGTCGAGGGCACGGTTCAAGGCC
ACTGCTGCAAGCTACAACCCAATAATTGCTCGTCTTTGCAAAGAGGGGAAGGTGGATCTT
GTGGTTAAGTGTCTTGACCAAATGATGTATCGACGCTGTAATCCTAATGAGGGTACATAC
AATGCAATTGCTGTGCTTTGTGAGGAGGGAAAGGTGCAAGAGGCATTTTCTATAATTCAG
AGCTTAGGTAATAAACAAAATTCCTCCACGCACGACTTCTACAAAGGTGTTATCTCAAGC
TTGTGTCGCAAAGGGAACACATACCCAGCATTTCAGCTTTTGTATGAAATGACAAAGTAT
GGATTTGTTCCAGACTCCTACACTTATTCATCTCTGATCAGAGGTTTGTGTTCAGAAGGA
ATGCTGGATGAAGCCATGGAGATATTCAGTATAATGGAAGAAAATTACTGCAGGCCTGAT
GTTGACAATTTTAATGCGCTAATACTTGGGTTATGCAAATGTCGAAAAACAGATTTGTCA
TTGATGGTTTTTGAGATGATGGTCAAGAAGGGCTATATGCCTAATGAAACAACTTATACC
ATCATCGTGGAAGGGATTGCCCACCAAGAAGAAATGGAGCTGGCAGCAGCTGTTCTAAAA
GAGTTGTATCTAAGACAAGCTGTGGGCAGAAGTACCTTAGAAAGGCTTGTTATGCAATAT
GACCTTGAGGGATTACCAATTTAA

Peptide Sequence

PEP ID

VIT_19s0027g00450.t01
PEP Infomation

pep chromosome:12X:19:19293615:19296054:1 gene:VIT_19s0027g00450 transcript:VIT_19s0027g00450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT
LPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVM
ELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMH
GNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSY
NVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDG
GERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDL
VVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISS
LCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPD
VDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLK
ELYLRQAVGRSTLERLVMQYDLEGLPI

Transcript Sequence

Transcript ID

VIT_19s0027g00450.t01
Transcript Infomation

cdna chromosome:12X:19:19293615:19296054:1 gene:VIT_19s0027g00450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTGGTGAGGAGCCACAATAACTTCCCTGCCAACCAAACACTCCACCACTGCTTGCAGGA
TGTGGGAAATTCAGCACCAACTCCAACCCCTCTTCTTCACAACAATTTATTTTCACAAGT
AACAACTCAAGCCTTCTTGGTGTTCTTCATTTATTTGTTTTTCCTTCATTCGATTTGATT
TTAAAGGGAAAAAAAGTAGAACCGTTTGTATAGTTCGTGGCTTCAATAACTGTACAGTTG
TCTCCAGCCATGGCAATCCTGGTGAATGCAATGTCTCCAATTACAAGCCCATCTCCAGAA
AATGCGAGAAAGGTTTGTGGATTCTTTTCCCAGGTTCCTAATCTCCATACCCTTTCACTG
AACAAGGGTTTTTCTAGGGTTTTGGCATCTACCCAGATCACCATTTCTCCTAAGGACAAT
GTTTTCACACTCCCCAATTGGAGGTCTGGAAAGAACGACCCAAGAACTAGAGACCTCAGG
CTCAATGATGCTTTTTTGTATTTGGAGTATATGATAGGGAAGGGACACAAGCCCGATGGA
GGACAAGCTACTCAGCTCATGTATGAGCTCTGCAAATCAAATAAGATGAGGAAAGCAACT
AAGGTGATGGAGTTGATGATCGGTTCAGGTACCACTCCAGATCCTGCTTCTTGTACCTTC
TTGGTGAATAATCTGTGTAAAAGAGGGAATGTTGGGTATGCAATGCAATTAGTTGAAAAA
ATGGAGGAATATGGATATCCAACCAATACTGTTACCTATAATTCTCTTGTTAGGGGGCTT
TGTATGCATGGAAACTTGAGTCAGAGCTTGCAAATTTTGGATAAATTTATGAAGAAGGGG
TTGGTTCCAAACGTGTTCACATACTCATTCTTGCTTGAAGCTGCGTATAAGGAGAGAGGG
GCTGATGAAGCCATAAGGCTCTTGGATGAGATAGTTGCTAAGGGTGGGAAGCCTAATCTG
GTTAGCTACAATGTTTTGTTAACTGGATTGTGCAAGGAAGGCAGAACAGAAGAGGCAATG
CAGTTCTTTAGGGATTTGCCATCTAAGGGGTTCAGTCCGAATGTTGTGAGCTATAATATT
TTGTTAAGGAGTTTGTGCTACGAGGGGCGATGGGAAAAGGCAAAGGAGCTTCTGGCTGAG
ATGGATGGCGGGGAACGTTCCCCATCCATAGTTACATTCAACATATTGATTGGTTCGCTT
GCCCTTCATGGACAAACTGATCAGGCTCTTGAGGTTTTAGATGATATGTCGAGGGCACGG
TTCAAGGCCACTGCTGCAAGCTACAACCCAATAATTGCTCGTCTTTGCAAAGAGGGGAAG
GTGGATCTTGTGGTTAAGTGTCTTGACCAAATGATGTATCGACGCTGTAATCCTAATGAG
GGTACATACAATGCAATTGCTGTGCTTTGTGAGGAGGGAAAGGTGCAAGAGGCATTTTCT
ATAATTCAGAGCTTAGGTAATAAACAAAATTCCTCCACGCACGACTTCTACAAAGGTGTT
ATCTCAAGCTTGTGTCGCAAAGGGAACACATACCCAGCATTTCAGCTTTTGTATGAAATG
ACAAAGTATGGATTTGTTCCAGACTCCTACACTTATTCATCTCTGATCAGAGGTTTGTGT
TCAGAAGGAATGCTGGATGAAGCCATGGAGATATTCAGTATAATGGAAGAAAATTACTGC
AGGCCTGATGTTGACAATTTTAATGCGCTAATACTTGGGTTATGCAAATGTCGAAAAACA
GATTTGTCATTGATGGTTTTTGAGATGATGGTCAAGAAGGGCTATATGCCTAATGAAACA
ACTTATACCATCATCGTGGAAGGGATTGCCCACCAAGAAGAAATGGAGCTGGCAGCAGCT
GTTCTAAAAGAGTTGTATCTAAGACAAGCTGTGGGCAGAAGTACCTTAGAAAGGCTTGTT
ATGCAATATGACCTTGAGGGATTACCAATTTAAGAAGTTCAAAAAAAAATCCCTGAATAC
AGAGAGGACCAAACAAGACCATAGATTGGTGTCCGATGCAAATTAGGTTCAACAGATTGT
GGGATCAGGAGCAGTAATGAATCTTTGATATGTATATTGACAGATGAAACATTTGATACG
GTATTTGAAGTTTTAGCAAGTTGGAAAGCGGCAAGTTCAACCATGAAATTGATCGGTATG
CAGTATCTTTTTCTTTTTTTTTTCCAGCTTCTATCTGTGATTTTCAATTGGAACTTCTAA
TCGTGTAAAGGAGTTGTATCTGTCAATCTTTCATTTAATCTAATGGGGGATTTAGCGACT
TTTGATCGGTCAAGTCCTTCCTTCCTCAAATATCATTTTTGTAAGAATCAGTTCCCTTTT
ACCTACCTCTTCTTATTGTATTAACTGCTTGTTGCCCACATTGTCCATTAATTGGTCTTG
TCATAATATGAAATGGCAAATCCTTAGGTGAGGATTGTAT