Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0027g00380.t01
CDS Infomation

cds chromosome:12X:19:19094294:19106279:-1 gene:VIT_19s0027g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAGTCCTGTTTCACGGGTTGCTGTAGTTGGAAGTGGAATTTCAGGAGCTGTGTGT
GCCTCACTGCTTGCTAGAAATGGGGTGTCAGTGACTCTTTTCGAGTCTGCTAGAGGACCT
GGTGGTCGAATGTCTTATCGAAAAGAAATTACTGAAGATGGGAAGGAGCTGGTATTTGAC
CATGGTGCTCCTCTTTTTACTGTGAGCAACCCTGATGTTTTGGGTATTGTTAGAGAGTGG
GAAGCAAGAGGTCTTGTTGCTGAGTGGAAAGAGAATTTTGCGTCTTTTGATTGTATCTCC
AGGAAATTCATTGACTTTGAAAAGGAAGGATTAAGCGAGAAATATGTGGGTGTCCCAGTC
ATGAATTCTATTTGTAGAGCATTATGCCATGAACCTGGAGTGGAAAGTAAGTTTGGTGTG
GGTGTTGGGAGCTTGGAGTGGTTTGATGAAAAGAACTTATGGTCGTTGACTGGTTTGGAT
GGACAAAATCTTGGCAATTTTGAGGGAGTGGTTGCATCAGACAAAAATATATTTTCTAAA
AGGTTTACAGATGTAACAGGACGACCACCGCCTCTTGATTTGAATTTGATTCCAGAGTTG
GCAGCAAAATTGCAAGAAGTTCCTGTTTGTTCGTGTTTTGTTCTCATGCTGGCATTTACA
AAGCCTCTGTCTTCTATATCTGTGAAAGGCTTCTCATTTAAGAATTCTGAAATTCTGAGC
TGGGCCTTCTGTGACAGCAGCAAGCCAGGGCATCCTGCTACTAGTGAACGTTGGGTATTG
CATTCAACAATGGAGTATGCAAGGGGCGTTGTTGCTCAAATTGGATTACAGAAGCCATCA
AGTTCAACATTAGCAAAAGTGGCTGAAGAGCTATTTGAAGAGTTTCAGAGGACAGGACTT
ACAATATCTCAGCCATTTTTCAAAAAGGCTCACAGATGGGGAAGTGCTTTTCCAGCTGCA
AGCATAGCCAGGGAGGAGAAATGCCTCTGGGATAGGAAGAAGAGAGTAGCCATTTGTGGA
GACTTTTGTGTTAGCCCAACTGTTGAGGGTGCTATACTTAGTGGCATGGCTGCATCCTCA
AAGCTCACAGAATTCCTTAGTTGCTTATAA

Peptide Sequence

PEP ID

VIT_19s0027g00380.t01
PEP Infomation

pep chromosome:12X:19:19094294:19106279:-1 gene:VIT_19s0027g00380 transcript:VIT_19s0027g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASPVSRVAVVGSGISGAVCASLLARNGVSVTLFESARGPGGRMSYRKEITEDGKELVFD
HGAPLFTVSNPDVLGIVREWEARGLVAEWKENFASFDCISRKFIDFEKEGLSEKYVGVPV
MNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQNLGNFEGVVASDKNIFSK
RFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPLSSISVKGFSFKNSEILS
WAFCDSSKPGHPATSERWVLHSTMEYARGVVAQIGLQKPSSSTLAKVAEELFEEFQRTGL
TISQPFFKKAHRWGSAFPAASIAREEKCLWDRKKRVAICGDFCVSPTVEGAILSGMAASS
KLTEFLSCL

Transcript Sequence

Transcript ID

VIT_19s0027g00380.t01
Transcript Infomation

cdna chromosome:12X:19:19094294:19106279:-1 gene:VIT_19s0027g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGTGATCCAGCAAGAACAGGGCTGAAGAAGAGAGAGCAAAGCAGGGATAATCACAATGG
CTAGTCCTGTTTCACGGGTTGCTGTAGTTGGAAGTGGAATTTCAGGAGCTGTGTGTGCCT
CACTGCTTGCTAGAAATGGGGTGTCAGTGACTCTTTTCGAGTCTGCTAGAGGACCTGGTG
GTCGAATGTCTTATCGAAAAGAAATTACTGAAGATGGGAAGGAGCTGGTATTTGACCATG
GTGCTCCTCTTTTTACTGTGAGCAACCCTGATGTTTTGGGTATTGTTAGAGAGTGGGAAG
CAAGAGGTCTTGTTGCTGAGTGGAAAGAGAATTTTGCGTCTTTTGATTGTATCTCCAGGA
AATTCATTGACTTTGAAAAGGAAGGATTAAGCGAGAAATATGTGGGTGTCCCAGTCATGA
ATTCTATTTGTAGAGCATTATGCCATGAACCTGGAGTGGAAAGTAAGTTTGGTGTGGGTG
TTGGGAGCTTGGAGTGGTTTGATGAAAAGAACTTATGGTCGTTGACTGGTTTGGATGGAC
AAAATCTTGGCAATTTTGAGGGAGTGGTTGCATCAGACAAAAATATATTTTCTAAAAGGT
TTACAGATGTAACAGGACGACCACCGCCTCTTGATTTGAATTTGATTCCAGAGTTGGCAG
CAAAATTGCAAGAAGTTCCTGTTTGTTCGTGTTTTGTTCTCATGCTGGCATTTACAAAGC
CTCTGTCTTCTATATCTGTGAAAGGCTTCTCATTTAAGAATTCTGAAATTCTGAGCTGGG
CCTTCTGTGACAGCAGCAAGCCAGGGCATCCTGCTACTAGTGAACGTTGGGTATTGCATT
CAACAATGGAGTATGCAAGGGGCGTTGTTGCTCAAATTGGATTACAGAAGCCATCAAGTT
CAACATTAGCAAAAGTGGCTGAAGAGCTATTTGAAGAGTTTCAGAGGACAGGACTTACAA
TATCTCAGCCATTTTTCAAAAAGGCTCACAGATGGGGAAGTGCTTTTCCAGCTGCAAGCA
TAGCCAGGGAGGAGAAATGCCTCTGGGATAGGAAGAAGAGAGTAGCCATTTGTGGAGACT
TTTGTGTTAGCCCAACTGTTGAGGGTGCTATACTTAGTGGCATGGCTGCATCCTCAAAGC
TCACAGAATTCCTTAGTTGCTTATAATGATAAAATGATCAGGATCTATAATTTGGATTAG
CTTTGCTAAAATGATGATTATAGAGTTGATAGACTACTGCCATTGGTTTAAATTTTATGA
ATTGTGTATCGATGTGAACTAAACCCGAATTAATGCACTAATCATTCTGTAATAACACT