Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0027g00310.t01
CDS Infomation

cds chromosome:12X:19:18993320:19006513:-1 gene:VIT_19s0027g00310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAGTTGTGGTATTCCCCCCAAGTTGAGGTCGTATGGACCACCACTGTTTGGGTTT
TGTAAGAAGGGGGATGCGAATAGAGCATATGAGGTCGATGCCCACATGGTGGAATCCGGT
GTGGTTGCTGAAGAACCTGAGCTCTGTGCTCTGCTTGGGCTTAGTGTGGAGTCGCGGTGG
GTGGACCAGGTGTATGAGATGATGCACCGCTTGCGAGCATCCGTGAGGCAGGTCTCAGAA
TCAACTGCTGAGGTTGTTGAACGATGGTTCAATTCCGAAGATGCTGCAGGAGTTGGGGAG
GAGAATTGGGACGTGGGGAAGGTGAGGGAAGGGGTTGTCAAAGGGGGAGGGGGCTGGCAT
GGGCAAGGGTGGCTGGGGAAAGGGAAATGGAAGGTGGGGAGGACTGAGATGGATGAGGCG
GGTGTGTGTCAGTCGTGTGGCGAGAAGCTTGTTGGCATTGATATTGATCCAAGGGAGACT
GAGAACTTTGCTAGCTCTTTGACCAAGTTGGCTTGCCAAAGAGAAGTTAAGGCAGATTTT
GTCCAGTTTCAGGAGTGGCTTCAGTGGCATGGTCCATTTGATGCAGTGGTAGATGGTGCC
AATGTGAGCCTGATCAATCAAAAGAGCTTCAGCTTTTTCGAGCTTAACTCTGTTGTAAAT
TGCTTACGTCAAATAAGTCCATCAAAGCAATTACCACTTGTTATCTTGCATAGAAGTCGT
GTAACTGGTGGTCCTGCTCAGAATCCCAATAACGAGAAGTTGATACAGAGTTGGAAAAAA
TCTGGTGCACTTTATGCTACGCCTGCTGGTTCAAATGATGATTGGTACTGGTTATATGCT
GCTGTTAATGGTAACTGCTTGCTAGTGACAAATGATGAGATGCGAGATCATTTGTTCCAG
CTGCTTGGAACTAGCTTTTTTCCTAGATGGAAGGAAAAGCATCAGGTTAGGCTGACGATG
ACTAGGCGTGGCCCTGTTCTCCATATGCCACCTCCATATTCAATTGTTATCCAGGAGTCA
GAACAGGGTAGTTGGCATGTACCAACTGTCATAGGCGACGACCTTGAGACCCCGAGACAG
TGGCTATGTGCCACCAGAACTAGGAAAAACCATCGGCATCCTCAGCATTTAGAGTGA

Peptide Sequence

PEP ID

VIT_19s0027g00310.t01
PEP Infomation

pep chromosome:12X:19:18993320:19006513:-1 gene:VIT_19s0027g00310 transcript:VIT_19s0027g00310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSCGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALLGLSVESRW
VDQVYEMMHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGVVKGGGGWH
GQGWLGKGKWKVGRTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTKLACQREVKADF
VQFQEWLQWHGPFDAVVDGANVSLINQKSFSFFELNSVVNCLRQISPSKQLPLVILHRSR
VTGGPAQNPNNEKLIQSWKKSGALYATPAGSNDDWYWLYAAVNGNCLLVTNDEMRDHLFQ
LLGTSFFPRWKEKHQVRLTMTRRGPVLHMPPPYSIVIQESEQGSWHVPTVIGDDLETPRQ
WLCATRTRKNHRHPQHLE

Transcript Sequence

Transcript ID

VIT_19s0027g00310.t01
Transcript Infomation

cdna chromosome:12X:19:18993320:19006513:-1 gene:VIT_19s0027g00310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAAAACAATGTCCAACAAAGCCAGGAAGAAGGCCAGACGAGAATCGCCTGAAGGAGTGC
TCAGATTTAAACTAGATATGTGTTCGAAGCGCGGTGATGTTGTGGAAGCTCTTCGCCTTT
ATGATGAGGCTAGGAGTCTAGGGGTTCCGCTTAGCCAGCACAATTACAATGTTTTATTGT
ATTTGTGCTCTTGTTCGGGGTCGAATGGGGATGAGAATGTGGTGAATTTGGCGTTGAAGA
GAGGTTTTGAGATTTTTAAGCAAATGGGTGTTGATGGAATTGAGCCTAACGAGGCTACAT
TTACTAGTGCGGCGAGGTTGGCCTGTGCGATGGAGGACCCAGAAATGGCGTTTAATTTGG
TGAAGCAGATGAAGAGTTGTGGTATTCCCCCCAAGTTGAGGTCGTATGGACCACCACTGT
TTGGGTTTTGTAAGAAGGGGGATGCGAATAGAGCATATGAGGTCGATGCCCACATGGTGG
AATCCGGTGTGGTTGCTGAAGAACCTGAGCTCTGTGCTCTGCTTGGGCTTAGTGTGGAGT
CGCGGTGGGTGGACCAGGTGTATGAGATGATGCACCGCTTGCGAGCATCCGTGAGGCAGG
TCTCAGAATCAACTGCTGAGGTTGTTGAACGATGGTTCAATTCCGAAGATGCTGCAGGAG
TTGGGGAGGAGAATTGGGACGTGGGGAAGGTGAGGGAAGGGGTTGTCAAAGGGGGAGGGG
GCTGGCATGGGCAAGGGTGGCTGGGGAAAGGGAAATGGAAGGTGGGGAGGACTGAGATGG
ATGAGGCGGGTGTGTGTCAGTCGTGTGGCGAGAAGCTTGTTGGCATTGATATTGATCCAA
GGGAGACTGAGAACTTTGCTAGCTCTTTGACCAAGTTGGCTTGCCAAAGAGAAGTTAAGG
CAGATTTTGTCCAGTTTCAGGAGTGGCTTCAGTGGCATGGTCCATTTGATGCAGTGGTAG
ATGGTGCCAATGTGAGCCTGATCAATCAAAAGAGCTTCAGCTTTTTCGAGCTTAACTCTG
TTGTAAATTGCTTACGTCAAATAAGTCCATCAAAGCAATTACCACTTGTTATCTTGCATA
GAAGTCGTGTAACTGGTGGTCCTGCTCAGAATCCCAATAACGAGAAGTTGATACAGAGTT
GGAAAAAATCTGGTGCACTTTATGCTACGCCTGCTGGTTCAAATGATGATTGGTACTGGT
TATATGCTGCTGTTAATGGTAACTGCTTGCTAGTGACAAATGATGAGATGCGAGATCATT
TGTTCCAGCTGCTTGGAACTAGCTTTTTTCCTAGATGGAAGGAAAAGCATCAGGTTAGGC
TGACGATGACTAGGCGTGGCCCTGTTCTCCATATGCCACCTCCATATTCAATTGTTATCC
AGGAGTCAGAACAGGGTAGTTGGCATGTACCAACTGTCATAGGCGACGACCTTGAGACCC
CGAGACAGTGGCTATGTGCCACCAGAACTAGGAAAAACCATCGGCATCCTCAGCATTTAG
AGTGAAGTCTGAAAAATGTGCATAAGCCAACTCTA