Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0015g02500.t01
CDS Infomation

cds chromosome:12X:19:12495707:12499992:-1 gene:VIT_19s0015g02500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTGACGAAGCAAATTCAAGACCCATCAGCTTATCTGATGATATTGTGCAGCGAGTT
CTACCCTTCCATTATCATTCCATTAAGAAATATGGTAAAAATTGTTTTATATGGATGGGC
CCAAAACCAGTGGTCAACATTATGGAGCCTGAGCTGATAAGGGATGTTCTCTTAAAGCAT
AATGCCTTTCAAAAACCACCTGTGCACCCGCTTGGCAAGCTGCTGGCTACTGGTGTTATT
GCACTAGAAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTA
GAAAAGTTGAAGCACATGGTACCCGCATTCCAATTGAGTTGTAGTGAAATGGTAAATAAA
TGGGAGAAGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAA
AATTTGGCGGGAGATGTGATTTCTAGAACTGCATTTGGTAGTAGCTATGAGGAAGGAAGA
AGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCCAGGTTTCGCAGTCAATA
TATATTCCGGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATGAGGCAAATTAGC
AATGAAGTCAATGCATTGTTAAAAGGTATCATTGAGAGAAGAGAGAAGGCAATGAAGGTT
GGTGAAACTGCTAATGATGATTTATTAGGTCTACTGATGGAATCCAACTACAAAGAAATG
CAAGAACATGGTGAAAGGAAGAATGTTGGAATGAGCAACAAGGATGTCATCGAGGAGTGT
AAGCTATTCTACTTCGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACAATGGTT
CTATTAAGCAAGCATTCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAAGTTTTT
GGCAATAAAAAACCAGATGGTGATGGTTTAAATCACCTTAAAATTGTTACAATGATTTTT
CATGAGGTCCTTAGGTTATATCCACCAGCATCCATGCTTATTCGATCTGTTTATGCTGAC
ACCGAAGTGGGAGGAATGTATTTACCAGACGGAGTGCAGGTCTCATTGCCAATCCTCCTA
CTTCATCATGACCATGAAATTTGGGGAGACGACGCAAAAGATTTCAACCCGGAGAGATTT
TCTGAAGGAGTTTCAAAGGCAACAAAGGGCCAATTTGCCTTTTTTCCATTTGGTTATGGT
CCTCGGGTGTGCATTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATG
ATCTTACAACGTTTCTCATTTGAACTTTCCCCATCTTATGCTCATGCGCCTATTAGTGTT
ATAACTATACAACCCCAATATGACTTCAAATGCTCTATGACCTCTGATTTCTCCCTAAGA
AAACTCATAAAAGAGTATCTCGAAAAATCATCTACAACCACAAGGACATATCTCTTGCCA
CCTTTGCTTTGA

Peptide Sequence

PEP ID

VIT_19s0015g02500.t01
PEP Infomation

pep chromosome:12X:19:12495707:12499992:-1 gene:VIT_19s0015g02500 transcript:VIT_19s0015g02500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIDEANSRPISLSDDIVQRVLPFHYHSIKKYGKNCFIWMGPKPVVNIMEPELIRDVLLKH
NAFQKPPVHPLGKLLATGVIALEGEQWTKRRKIINPAFHLEKLKHMVPAFQLSCSEMVNK
WEKKLSKDGSCELDIWPDLENLAGDVISRTAFGSSYEEGRRIFQLQKEQAHLAVQVSQSI
YIPGWRFVPTKTNKRMRQISNEVNALLKGIIERREKAMKVGETANDDLLGLLMESNYKEM
QEHGERKNVGMSNKDVIEECKLFYFAGQETTSVLLLWTMVLLSKHSNWQARAREEVLQVF
GNKKPDGDGLNHLKIVTMIFHEVLRLYPPASMLIRSVYADTEVGGMYLPDGVQVSLPILL
LHHDHEIWGDDAKDFNPERFSEGVSKATKGQFAFFPFGYGPRVCIGQNFAMMEAKMALAM
ILQRFSFELSPSYAHAPISVITIQPQYDFKCSMTSDFSLRKLIKEYLEKSSTTTRTYLLP
PLL

Transcript Sequence

Transcript ID

VIT_19s0015g02500.t01
Transcript Infomation

cdna chromosome:12X:19:12495707:12499992:-1 gene:VIT_19s0015g02500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCTCTACTGTGAAGTGATTCACAAATCGCTCCTGGAAGTCTCTTCCAAACCGGAAATGA
AGCTCAGTTCAGTTGCAATTTCCTTTGCTTTTATTACTCTCCTAATATATGCATGGAGAT
TATTGAATTCGGTGTGGTTGAAACCAAAGAAGATAGAGAGGTACCTTAGGCAACAAGGTC
TGATTGGAAATTCCTACAGATTGTTACATGGGGATTTTAGAGAGATGTCAAGGATGATTG
ACGAAGCAAATTCAAGACCCATCAGCTTATCTGATGATATTGTGCAGCGAGTTCTACCCT
TCCATTATCATTCCATTAAGAAATATGGTAAAAATTGTTTTATATGGATGGGCCCAAAAC
CAGTGGTCAACATTATGGAGCCTGAGCTGATAAGGGATGTTCTCTTAAAGCATAATGCCT
TTCAAAAACCACCTGTGCACCCGCTTGGCAAGCTGCTGGCTACTGGTGTTATTGCACTAG
AAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGT
TGAAGCACATGGTACCCGCATTCCAATTGAGTTGTAGTGAAATGGTAAATAAATGGGAGA
AGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAAAATTTGG
CGGGAGATGTGATTTCTAGAACTGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATAT
TCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCCAGGTTTCGCAGTCAATATATATTC
CGGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATGAGGCAAATTAGCAATGAAG
TCAATGCATTGTTAAAAGGTATCATTGAGAGAAGAGAGAAGGCAATGAAGGTTGGTGAAA
CTGCTAATGATGATTTATTAGGTCTACTGATGGAATCCAACTACAAAGAAATGCAAGAAC
ATGGTGAAAGGAAGAATGTTGGAATGAGCAACAAGGATGTCATCGAGGAGTGTAAGCTAT
TCTACTTCGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACAATGGTTCTATTAA
GCAAGCATTCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAAGTTTTTGGCAATA
AAAAACCAGATGGTGATGGTTTAAATCACCTTAAAATTGTTACAATGATTTTTCATGAGG
TCCTTAGGTTATATCCACCAGCATCCATGCTTATTCGATCTGTTTATGCTGACACCGAAG
TGGGAGGAATGTATTTACCAGACGGAGTGCAGGTCTCATTGCCAATCCTCCTACTTCATC
ATGACCATGAAATTTGGGGAGACGACGCAAAAGATTTCAACCCGGAGAGATTTTCTGAAG
GAGTTTCAAAGGCAACAAAGGGCCAATTTGCCTTTTTTCCATTTGGTTATGGTCCTCGGG
TGTGCATTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTAC
AACGTTTCTCATTTGAACTTTCCCCATCTTATGCTCATGCGCCTATTAGTGTTATAACTA
TACAACCCCAATATGACTTCAAATGCTCTATGACCTCTGATTTCTCCCTAAGAAAACTCA
TAAAAGAGTATCTCGAAAAATCATCTACAACCACAAGGACATATCTCTTGCCACCTTTGC
TTTGA