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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0015g01900.t01
CDS Infomation

cds chromosome:12X:19:10691570:10693958:1 gene:VIT_19s0015g01900 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:D7UAV2]
Sequence

ATGGCTGCCTTAGCAACTGCTGAAGTTTGTGATTCAAATGCAGCACATCTGACGAGCGGT
GATTTGCGTGTTTTGCAACCAATCTTCCAGAGTTATGGGCAGTGTCGAGCTTTCTCAGGC
CCCATTGTCACACTTAAGGTATTTGAGGACAATGTGTTGGTAAGGGCGCTTCTTGAAACC
AGAGGTGAAGGAAGAGTCCTAGTTATAGATGGTGGAGGAAGCATGAGATGTGCCTTGGTG
GGAGGGAATATAGGACAGTTGGCACAAAATATGGGATGGGCTGGAATTGTGGTGAATGGC
TGCATTAGAGATGTAGATGAGATTAAGGATTGTGATATTGGAGTTAGAGCCTTGGGGGCT
CATCCCATGAAATCAAACAAAAAAGGCATCGGTGAGAAGCATGTCCCTGTTTACATAGCA
GGTGCCTTAATTCGTGATGGGGAATGGTTATACGCAGACAGCGACGGTATTCTAGTCTCA
AAATTTGAGCTCTCTCTTTGA

Peptide Sequence

PEP ID

VIT_19s0015g01900.t01
PEP Infomation

pep chromosome:12X:19:10691570:10693958:1 gene:VIT_19s0015g01900 transcript:VIT_19s0015g01900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:D7UAV2]
Sequence

MAALATAEVCDSNAAHLTSGDLRVLQPIFQSYGQCRAFSGPIVTLKVFEDNVLVRALLET
RGEGRVLVIDGGGSMRCALVGGNIGQLAQNMGWAGIVVNGCIRDVDEIKDCDIGVRALGA
HPMKSNKKGIGEKHVPVYIAGALIRDGEWLYADSDGILVSKFELSL

Transcript Sequence

Transcript ID

VIT_19s0015g01900.t01
Transcript Infomation

cdna chromosome:12X:19:10691570:10693958:1 gene:VIT_19s0015g01900 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:D7UAV2]
Sequence

TAAAACTTCTTTCTGTTCATCATTCTCCACTGGATAACAAATGGCTGCCTTAGCAACTGC
TGAAGTTTGTGATTCAAATGCAGCACATCTGACGAGCGGTGATTTGCGTGTTTTGCAACC
AATCTTCCAGAGTTATGGGCAGTGTCGAGCTTTCTCAGGCCCCATTGTCACACTTAAGGT
ATTTGAGGACAATGTGTTGGTAAGGGCGCTTCTTGAAACCAGAGGTGAAGGAAGAGTCCT
AGTTATAGATGGTGGAGGAAGCATGAGATGTGCCTTGGTGGGAGGGAATATAGGACAGTT
GGCACAAAATATGGGATGGGCTGGAATTGTGGTGAATGGCTGCATTAGAGATGTAGATGA
GATTAAGGATTGTGATATTGGAGTTAGAGCCTTGGGGGCTCATCCCATGAAATCAAACAA
AAAAGGCATCGGTGAGAAGCATGTCCCTGTTTACATAGCAGGTGCCTTAATTCGTGATGG
GGAATGGTTATACGCAGACAGCGACGGTATTCTAGTCTCAAAATTTGAGCTCTCTCTTTG
AACCAGCGGTTTCGACTCCCCCACTTAAGTGTTTGATAATATGAAATTGGGTTCTAAATT
ATCACTTCATCATTCCCTGATAGCCTATCAGACTATGCATATCAGATTACTTTCATGCTC
AACATGTAATAAACCAGAAAGTTCTTGTCCTGCTGTTAGCTATTGCAGATTCAACATTAC
TCGCAGCTCCAAACTAATTGTAACAGAGGGTCTCTCTTGATGTTTTAATAAACTTGTGTT
TTTCCC