Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0015g00780.t01
CDS Infomation

cds chromosome:12X:19:8915468:8922437:-1 gene:VIT_19s0015g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATAGGAGTCCAGCGCTAGACATGCCTGATGTCCCAAAAGGGCAGCTTCCTCCACAC
ATCGAGCTCCAGAGAACTCGCGTTCTCTGCAATTTCGATGCTCCTACTCATACAGAGAAT
GTTCAATATTCTGGTGCTTATTCATCCATGGGAGTTGATAATAGTTTGCGGATGGATCAA
TTCTGCAATAATTTTAGAGTTGAAGTGATTCGGCTTTCAGAGGATGACATGGAGTTTGAT
ATGATTGGTATTGATCCTTCGATTGCTAATGCATTTCGTAGGATCCTCATAGCAGAGCTT
CCCACAATGGCTATCGAAAAGGTTCTCATTGCAAATAATACATCAATTGTCCAAGATGAA
GTGCTTGCCCACAGATTGGGTCTCATTCCAATCAATGCTGACCCAAGGCTGTTTGATGAT
TTGTCAGAAAATGATACTCCTAATGAAAAGAACACCATTGTTTTTAACCTTCACGTTCGT
TGTGAGCGAGGCGGGCCCCGACTTACAGTAAAATCAAATGAATTAAAGTGGTTGCCACAT
GGTAGTGAGTTTCCATTGGCTACAGAAAATACAACTTCAAGTTCAACCTCAAAACCAAAA
ACCTATACCTCATTTAGCTGCAGCCAGGATTCCTTGCCAGAATTTTCTGACAAATCCATC
GGTCCAAAGCATCCAGACATTATTATTGCTAAACTTGGCCCTGGCCAGGAAATTGAACTT
GAAGCACATGCGGTTAAAGGGATGGGTAAAACTCATGCGAAGTGGTCGCCAGTGGCCACT
GCTTGGTATAGGATGCTTCCTGAGGTTGTGTTGTTACAAGAAATTGAAGATGAGAAGGCA
GAAGAACTTGTCAAGAAATGTCCAGTTAATGTATTTGATATTGAAGATATTGCCAAAGGT
AAAAAAAAGGCCACTGTAGCCCGACCACGAGCTTGTACACTATGTAGAGAATGCATCAGA
GGGGATGATTGGGATAAGCATGTGGCGATACGACGTGTCAAGAATCACTTCATATTTACC
ATTGAATCAACTGGGGCATTACCTCCAGAAGTACTATTTAATGAAGCTGTGAAGGTCTTG
GAAGACAAATGCGAACGAGTGATTACTGAGCTCTCATAA

Peptide Sequence

PEP ID

VIT_19s0015g00780.t01
PEP Infomation

pep chromosome:12X:19:8915468:8922437:-1 gene:VIT_19s0015g00780 transcript:VIT_19s0015g00780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ
FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE
VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPH
GSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIEL
EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKG
KKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVL
EDKCERVITELS

Transcript Sequence

Transcript ID

VIT_19s0015g00780.t01
Transcript Infomation

cdna chromosome:12X:19:8915468:8922437:-1 gene:VIT_19s0015g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATAAAGTCTAAAACCCTTTTATCTCCATCTCTCTATTCTAACTCCAAAACCCTAACCCTG
ACCACATTAGTTGATCAATCCAGAGCTTTTTAAACCCTACCATAAAATCCAAAACCCTTT
CATCTCCCTCTCGGATTCAAACTCCAAAAATCCTAATCCTGACCACATCGACTGATCCAT
CAAGAGAAGCCATGCATAGGAGTCCAGCGCTAGACATGCCTGATGTCCCAAAAGGGCAGC
TTCCTCCACACATCGAGCTCCAGAGAACTCGCGTTCTCTGCAATTTCGATGCTCCTACTC
ATACAGAGAATGTTCAATATTCTGGTGCTTATTCATCCATGGGAGTTGATAATAGTTTGC
GGATGGATCAATTCTGCAATAATTTTAGAGTTGAAGTGATTCGGCTTTCAGAGGATGACA
TGGAGTTTGATATGATTGGTATTGATCCTTCGATTGCTAATGCATTTCGTAGGATCCTCA
TAGCAGAGCTTCCCACAATGGCTATCGAAAAGGTTCTCATTGCAAATAATACATCAATTG
TCCAAGATGAAGTGCTTGCCCACAGATTGGGTCTCATTCCAATCAATGCTGACCCAAGGC
TGTTTGATGATTTGTCAGAAAATGATACTCCTAATGAAAAGAACACCATTGTTTTTAACC
TTCACGTTCGTTGTGAGCGAGGCGGGCCCCGACTTACAGTAAAATCAAATGAATTAAAGT
GGTTGCCACATGGTAGTGAGTTTCCATTGGCTACAGAAAATACAACTTCAAGTTCAACCT
CAAAACCAAAAACCTATACCTCATTTAGCTGCAGCCAGGATTCCTTGCCAGAATTTTCTG
ACAAATCCATCGGTCCAAAGCATCCAGACATTATTATTGCTAAACTTGGCCCTGGCCAGG
AAATTGAACTTGAAGCACATGCGGTTAAAGGGATGGGTAAAACTCATGCGAAGTGGTCGC
CAGTGGCCACTGCTTGGTATAGGATGCTTCCTGAGGTTGTGTTGTTACAAGAAATTGAAG
ATGAGAAGGCAGAAGAACTTGTCAAGAAATGTCCAGTTAATGTATTTGATATTGAAGATA
TTGCCAAAGGTAAAAAAAAGGCCACTGTAGCCCGACCACGAGCTTGTACACTATGTAGAG
AATGCATCAGAGGGGATGATTGGGATAAGCATGTGGCGATACGACGTGTCAAGAATCACT
TCATATTTACCATTGAATCAACTGGGGCATTACCTCCAGAAGTACTATTTAATGAAGCTG
TGAAGGTCTTGGAAGACAAATGCGAACGAGTGATTACTGAGCTCTCATAAAACTTTGCTC
TTGGGATGCCTAGAAGAGAGATTGATGTGGAAAAGAAAAACAGAAAGGAAAAGGTTTGTG
CTCTGCTTCAAATCAGAATATTGGGAAAAATCAGCTTCACGATTGTCGGGATAAGGTCAT
CATTAATTCAGCAAAAAGGAAAAGGACGAAAGGAACCTGATTATTATTTAGAGTTGCCAG
GAAATCGTGTTTTGCATGAGTAGTTCCTGGTGTACTTTTAACTTGTCTTGGTCCTGATTG
GAAGCCCCAAGTTATTTTTTTCTTGTGCAAGATGTAAAACAGCTTATTTATTGTCTGCAT
ATGGCTCACATATTTTCTGTGCAAGATGAGATATTATGGAGTATGACAGTCTCCATGTTT
TGTTATGTTTCAATTATAGATAATGTATTTGTGCCTGGTGTTCTCTCC