Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_19s0015g00510.t01
CDS Infomation	cds chromosome:12X:19:8585325:8587296:-1 gene:VIT_19s0015g00510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6I555]
Sequence	ATGTCAACCTTGTCACTCTCCTTCCTTGTGATTCTCTTATATGTCTCTACTGCATACTCT GCACGTCTCCTACCGCTAGAATCAGAAGCAACAACATGGAGCTCAAGAGGAGGAAGTTTG AGAACGCAGCTTGATGAAGTATCATGTAGAACTGGGAACCCCATTGATGATTGCTGGAGG TGTGACCCTGACTGGGAAACCAACAGAAAGATGCTAGCAGACTGTGGTGTAGGGTTCGGG CGCAATGCCATTGGCGGTCGAGATGGTGAGCTTTACGTTGTCACTGATTCAGGCAACGAC GACCCTGCCAACCCAATCCCAGGCACACTCAGACATGCTGTCATCCAATACGTGCCGCTG TGGATAGTGTTTGATCATGACATGGTCATCAACCTGAAGGAAGAGCTCATCATGAACTCT TACAAGACAATAGATGGGAGGGGATTCAACATCCAAATAGCCAATGGGGCCTGCATAACC ATACAAAACGTGAGCAACATCATCATACATGGTGTCTACATACATGGTTGTGTGCCAACT GGGAACGCCATCGTGAGGGACAGGCCGGATCATTATGGGATGAGAGGGATGTCAGATGGG GATGGGATATCGATATTTGGAGGAACGGATATATGGATTGATCATTGTACCCTAGCTGAT TGCTACGACGGACTCATTGATGCAGTGTATGGATCTAAATCAATAACCATCTCAAACAAC TACATGTTGAATCACAATGAAGCCATGCTCATGGGGCATAGTGATGACTTCCTTGCTGAC AAGAATATGCAGGTCACAATTGCCTTCAATTACTTTGGGGAAGGCCTAGTTCAAAGAATG CCCAGGTGCAGACATGGGTATTTCCATATTGTAAATAATGTATACACTGATTGGGAAATG TATGCAATTGGTGGAAGTGCCAATCCAACAATCAACAGCCAAGGAAATGTCTTCATTGCA AGGGATGACAATTCTACCAAGGAGGTGACCAAACGTGAAAGCCTCTTGGGATATGAAGAG TGGAAGGACTGGAATTGGAGATCAGATGGAGATTTGATGTTGAATGGTGCTTACTTTAGA GCTTCTGGAGAAGAAGCACCTGCAAGTTACTCAAAAGCATCGAGCATGGTAGCAAGACCA GCTTCACTTTTAACATATATCACTGCATCTGCTGGAGTTCTCAATTGTAAGATAGGCTAT GCATGCTAA

Peptide Sequence

PEP ID	VIT_19s0015g00510.t01
PEP Infomation	pep chromosome:12X:19:8585325:8587296:-1 gene:VIT_19s0015g00510 transcript:VIT_19s0015g00510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6I555]
Sequence	MSTLSLSFLVILLYVSTAYSARLLPLESEATTWSSRGGSLRTQLDEVSCRTGNPIDDCWR CDPDWETNRKMLADCGVGFGRNAIGGRDGELYVVTDSGNDDPANPIPGTLRHAVIQYVPL WIVFDHDMVINLKEELIMNSYKTIDGRGFNIQIANGACITIQNVSNIIIHGVYIHGCVPT GNAIVRDRPDHYGMRGMSDGDGISIFGGTDIWIDHCTLADCYDGLIDAVYGSKSITISNN YMLNHNEAMLMGHSDDFLADKNMQVTIAFNYFGEGLVQRMPRCRHGYFHIVNNVYTDWEM YAIGGSANPTINSQGNVFIARDDNSTKEVTKRESLLGYEEWKDWNWRSDGDLMLNGAYFR ASGEEAPASYSKASSMVARPASLLTYITASAGVLNCKIGYAC

Transcript Sequence

Transcript ID	VIT_19s0015g00510.t01
Transcript Infomation	cdna chromosome:12X:19:8585325:8587296:-1 gene:VIT_19s0015g00510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6I555]
Sequence	ATGTCAACCTTGTCACTCTCCTTCCTTGTGATTCTCTTATATGTCTCTACTGCATACTCT GCACGTCTCCTACCGCTAGAATCAGAAGCAACAACATGGAGCTCAAGAGGAGGAAGTTTG AGAACGCAGCTTGATGAAGTATCATGTAGAACTGGGAACCCCATTGATGATTGCTGGAGG TGTGACCCTGACTGGGAAACCAACAGAAAGATGCTAGCAGACTGTGGTGTAGGGTTCGGG CGCAATGCCATTGGCGGTCGAGATGGTGAGCTTTACGTTGTCACTGATTCAGGCAACGAC GACCCTGCCAACCCAATCCCAGGCACACTCAGACATGCTGTCATCCAATACGTGCCGCTG TGGATAGTGTTTGATCATGACATGGTCATCAACCTGAAGGAAGAGCTCATCATGAACTCT TACAAGACAATAGATGGGAGGGGATTCAACATCCAAATAGCCAATGGGGCCTGCATAACC ATACAAAACGTGAGCAACATCATCATACATGGTGTCTACATACATGGTTGTGTGCCAACT GGGAACGCCATCGTGAGGGACAGGCCGGATCATTATGGGATGAGAGGGATGTCAGATGGG GATGGGATATCGATATTTGGAGGAACGGATATATGGATTGATCATTGTACCCTAGCTGAT TGCTACGACGGACTCATTGATGCAGTGTATGGATCTAAATCAATAACCATCTCAAACAAC TACATGTTGAATCACAATGAAGCCATGCTCATGGGGCATAGTGATGACTTCCTTGCTGAC AAGAATATGCAGGTCACAATTGCCTTCAATTACTTTGGGGAAGGCCTAGTTCAAAGAATG CCCAGGTGCAGACATGGGTATTTCCATATTGTAAATAATGTATACACTGATTGGGAAATG TATGCAATTGGTGGAAGTGCCAATCCAACAATCAACAGCCAAGGAAATGTCTTCATTGCA AGGGATGACAATTCTACCAAGGAGGTGACCAAACGTGAAAGCCTCTTGGGATATGAAGAG TGGAAGGACTGGAATTGGAGATCAGATGGAGATTTGATGTTGAATGGTGCTTACTTTAGA GCTTCTGGAGAAGAAGCACCTGCAAGTTACTCAAAAGCATCGAGCATGGTAGCAAGACCA GCTTCACTTTTAACATATATCACTGCATCTGCTGGAGTTCTCAATTGTAAGATAGGCTAT GCATGCTAAAATCCAGCCCAAGAAGATATCCAGTTTCATTTTTTTTCTTCCTTTCTTTTT TTTGGTGTAAACTAGAATTATAAATTAAAAAAAAAAAATCAATTGTGTTTAAGTAAATGT CTAAAATTCATTCAATTTTGTTATGTGTGAAGAAAAGGAAAAAAAAA