Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0015g00170.t01
CDS Infomation

cds chromosome:12X:19:8137561:8146862:-1 gene:VIT_19s0015g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATTTGGGCGATCTCAACAAGGTATGGGAAGTGAAGCCCCTGAAAAAGGCTGGAGAA
GATGAAGCGAGGAAGATTCTGGAGAGGGTAGCCAAACATGTCCAACCCATTATGCGGAAA
CACAAATGGAGAGTCAAGCTTCTCTCTGAATTCTGCCCAAACAATCCGGCTCTTCTAGGG
TTGAATGTAGGGGGTGGCATTCATGTGAAGTTGAGACTTCGGAGGCCCAACAGAGATTGG
GATTTCTTCCCATTCGATCAAATTCTTGATACCATGCTTCATGAGCTTTGCCACAATGTC
CATGGTCCTCATAATGCAGATTTCTACAAGCTTTGGGATGAAATCAGAAAGGAGTGTGAG
GAGCTGATGGCAAAGGGCATAACTGGAACAGGGGAGGGGTTTGATCTTCCTGGGAGGCGT
TTGGGTGGTTTCTCTCGTCAACCTCCTGTTTCATCTCTACGCCAAACTGCACTTGCTGCT
GCAGAAAAGAGAGCCCGTCTAGGATCTCTAGTGCCATCTGGTCCTAAACGCCTTGGAGGT
GATAGCAGTATCATGGATGCACTTAGTCCAATACAAGCTGCTGCAATGGCTGCAGAAAGG
AGATTACAGGATGATATCTGGTGTGGCTCCCAGAGTTGTGAAGCTTCAGAGGGTGGTGAA
AGTAGCTCTGATCTCTCTGACAGGCATGTACATAGGGAGCAAAGTGCTGGAATGTCAAGT
CATGGTAGTGGTAGAGGTGCACTTGATTTGGATGTGACATCTCGAAAAAGAAGTCATGAA
ACTGGATCAAGTTTTGTGGATCTATCCAAGTGTGCTTCAGCCTCTGGGTCTGTGCTTGGC
CACAATGCAACTCACAATACTGAGGAATCGATTATGTGGGAGTGTGGAATTTGCACTTTG
TTGAATCCACCATTAGCTCCTATATGCAAGGTTTGCAGCACTGAGAAGCCAAAAGATGTT
GGTATCAAGTACAAAGTCTGGTCATGTAAATTCTGTACTCTGGAAAACAACGTAGAGTTA
GACAAATGTGGTGCATGCGGACAGTGGAGATATTCTCATGGCCCACCAGTGTCAACTCGT
GCACCCAATCTTGGCACTTGA

Peptide Sequence

PEP ID

VIT_19s0015g00170.t01
PEP Infomation

pep chromosome:12X:19:8137561:8146862:-1 gene:VIT_19s0015g00170 transcript:VIT_19s0015g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNLGDLNKVWEVKPLKKAGEDEARKILERVAKHVQPIMRKHKWRVKLLSEFCPNNPALLG
LNVGGGIHVKLRLRRPNRDWDFFPFDQILDTMLHELCHNVHGPHNADFYKLWDEIRKECE
ELMAKGITGTGEGFDLPGRRLGGFSRQPPVSSLRQTALAAAEKRARLGSLVPSGPKRLGG
DSSIMDALSPIQAAAMAAERRLQDDIWCGSQSCEASEGGESSSDLSDRHVHREQSAGMSS
HGSGRGALDLDVTSRKRSHETGSSFVDLSKCASASGSVLGHNATHNTEESIMWECGICTL
LNPPLAPICKVCSTEKPKDVGIKYKVWSCKFCTLENNVELDKCGACGQWRYSHGPPVSTR
APNLGT

Transcript Sequence

Transcript ID

VIT_19s0015g00170.t01
Transcript Infomation

cdna chromosome:12X:19:8137561:8146862:-1 gene:VIT_19s0015g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTGGAGTTTCACGCCTTGTGGTTTTCAAAACGCCGATGGCAGTGAAAATCTGAACCCA
CGAGTCAATTGCTAGGGTTTTTCGTTTACTGCTCAGATTGATAAGCTAGAGTTTTGGATT
ACTGAAACATGAATTTGGGCGATCTCAACAAGGTATGGGAAGTGAAGCCCCTGAAAAAGG
CTGGAGAAGATGAAGCGAGGAAGATTCTGGAGAGGGTAGCCAAACATGTCCAACCCATTA
TGCGGAAACACAAATGGAGAGTCAAGCTTCTCTCTGAATTCTGCCCAAACAATCCGGCTC
TTCTAGGGTTGAATGTAGGGGGTGGCATTCATGTGAAGTTGAGACTTCGGAGGCCCAACA
GAGATTGGGATTTCTTCCCATTCGATCAAATTCTTGATACCATGCTTCATGAGCTTTGCC
ACAATGTCCATGGTCCTCATAATGCAGATTTCTACAAGCTTTGGGATGAAATCAGAAAGG
AGTGTGAGGAGCTGATGGCAAAGGGCATAACTGGAACAGGGGAGGGGTTTGATCTTCCTG
GGAGGCGTTTGGGTGGTTTCTCTCGTCAACCTCCTGTTTCATCTCTACGCCAAACTGCAC
TTGCTGCTGCAGAAAAGAGAGCCCGTCTAGGATCTCTAGTGCCATCTGGTCCTAAACGCC
TTGGAGGTGATAGCAGTATCATGGATGCACTTAGTCCAATACAAGCTGCTGCAATGGCTG
CAGAAAGGAGATTACAGGATGATATCTGGTGTGGCTCCCAGAGTTGTGAAGCTTCAGAGG
GTGGTGAAAGTAGCTCTGATCTCTCTGACAGGCATGTACATAGGGAGCAAAGTGCTGGAA
TGTCAAGTCATGGTAGTGGTAGAGGTGCACTTGATTTGGATGTGACATCTCGAAAAAGAA
GTCATGAAACTGGATCAAGTTTTGTGGATCTATCCAAGTGTGCTTCAGCCTCTGGGTCTG
TGCTTGGCCACAATGCAACTCACAATACTGAGGAATCGATTATGTGGGAGTGTGGAATTT
GCACTTTGTTGAATCCACCATTAGCTCCTATATGCAAGGTTTGCAGCACTGAGAAGCCAA
AAGATGTTGGTATCAAGTACAAAGTCTGGTCATGTAAATTCTGTACTCTGGAAAACAACG
TAGAGTTAGACAAATGTGGTGCATGCGGACAGTGGAGATATTCTCATGGCCCACCAGTGT
CAACTCGTGCACCCAATCTTGGCACTTGAGAGGTACCCCTCAAAATGGTCCATAAACTCT
CTGCACATATATATGGCTACTATGATCCTGTCATTTTTTGGAGATATTTACCTTTATAGT
TTGGTTAGAATGGTTCTCATATCATGTTTTGG