Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0014g04530.t01
CDS Infomation

cds chromosome:12X:19:4850912:4855191:-1 gene:VIT_19s0014g04530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCTCTTACAACAGTTGCAGTTATCTTCTCTTATGTATTATCCCTCTTAAGAATC
TCCGTGGCAGTAGACACCATAATTGTAAATCAAAACATTACAGATGGTGAGACCATCACT
TCAGCTGGTGGGAGCTTTGAACTGGGTTTCTTCAGTCCAGGTAATTCCAAGAACCGATAC
TTGGGGATATGGTACAAGAAAGTGGCTACTGGGACAGTGGTATGGGTTGCCAATAGAGAA
AGTCCACTAACTGATTCATCGGGAGTTTTAAAGGTCACTGAGCAGGGAATTCTTGTTCTG
GTCAACGATACTAATGGAATTCTTTGGAATTCTAGTTCATCACGTTCTGCACAGGATCCA
AACGCTCAGCTTTTGGAATCTGGAAATCTTGTTATGAGAAATGGCAATGATAGTGACCCG
GAAAACTTCCTATGGCAGAGTTTTGATTATCCATGCGATACTCTTCTACCAGGCATGAAG
TTTGGATGGAACAGAGTAACAGGCCTGGATCGGTACCTGTCATCTTGGAAGAGTACGGAT
GACCCTTCTAAAGGTAATTTTACTTATGGGATTGATCTAAGTGGATTTCCACAACCATTT
TTGAGGAATGGTTTAGCTGTAAAGTTTCGTGCTGGACCATGGAATGGTGTTCGATTTGGT
GGAATACCACAATTAACAAACAACTCACTTTTTACGTCTGATTATGTTTCTAATGAAAAG
GAGATATATTCTATTTATTATCTTGTTAACAGCTCTGTTTTTGTGAGGCGTGTGTTAACT
CCTGATGGTTATTCACGAAGGTTCACATGGACTGATAAAAAAAATGAATGGACTCTTTAC
GCAACTGCACAGAGCGATGACTGTGACAATTATGCAATATGTGGAGTATATGGAATCTGT
AAGATTGATGAATCTCCAAAATGTGAGTGCATGAAGGGATTTAGGCCAAAGTTCCAAAGC
AATTGGGACATGGCAGACTGGTCAAATGGATGCATTCGAAGCACTCCGCTGGATTGTCAG
AAGGGTGATGGATTTGTAAAGTACTCTGGTGTGAAACTGCCAGACACGCGGAACTCCTGG
TTTAATGAAAGCATGAACCTTAAGGAATGTGCTTCCCTGTGCTTGAGGAACTGCTCTTGC
ACTGCTTATGCAAATTCGGACATCAGAGGAGGAGGAAGTGGATGCTTGCTCTGGTTTGGT
GACTTGATTGATATCAGAGACTTCACTCACAATGGGCAAGAGTTTTATGTAAGGATGGCT
GCATCAGAATTAGAAGCTTCTTCAAGCATAAAAAGCAGCTCCAAGAAGAAGAAAAAGCAT
GTCATTATCATCTCTATATCAACTACAGGAATAGTTCTTTTAAGTCTAGTCCTGACCTTG
TATGTGCTCAAGAAAAGGAAGAAGCAACTAAAGAGAAAAGGATACATGGATCATAATTCA
AGAGATGAAAATAATGAAGGCCAAGCGCATTTAGAGTTACCATTATTTGACTTGGATACA
TTATTGAATGCCACCAATAACTTTTCTAGTTACAATAAGCTTGGAGAGGGTGGTTTTGGA
CCTGTCTATAAGGGAATATTGCAAGAGGGACAAGAAATTGCAGTGAAGATGATGTCAAAC
ACTTCTAGACAAGGATTAAAAGAGTTCAAAAATGAAGTTGAATCCATTGCAAAACTTCAA
CACCGAAATCTTGTAAAGCTTCTTGGATGCTGCATTCATGGCAGAGAAAGAATGTTGATC
TACGAATACATGCCCAACAAAAGCTTGGACTTTTTCATTTTTGATCAAATGCAAAGCGTG
GCACTAGATTGGTCTAAGCGCTTCCTCATTATCAATGGGATTGCTCGAGGTCTTCTTTAT
CTTCATCAAGATTCTAGACTCAGAATAATCCATAGAGACCTTAAAGCAGAAAACATTTTA
CTAGATAATGAAATGAGCCCCAAAATTTCAGACTTTGGAATAGCAAGATGTTTTGGAGGA
AATGAAACTGAAGCAAACACAACAAGAGTGGCTGGAACATTAGGTTATATGTCTCCAGAG
TATGCAAGTGAAGGATTGTATTCCACAAAATCCGATGTTTTTAGCTTTGGTGTTTTAGTT
CTAGAGATTGTAAGTGGGAAGAGAAATAGAGGATTTAACCACCCAGATCACGACCTTAAT
CTTCTTGGGCATGCGTGGACACTCTTTATGGAAGATAGGTCTTCAGAATTTATTGATGCA
TCAATGGGCAACTCTTGCATCCTATCTGAAGTGCTACGTTCAATCAATTTGGGTCTGCTA
TGTGTGCAACGTTTCCCAGATGATCGACCAAGCATGCATTCTGTGGCTCTGATGTTGGGT
AGTGAGGGTGCACTACCTCAACCCAAAGAGCCTTGTTTCTTCATTGATAGGAATATGATG
GAAGCAAATTCTCCCTCTGGTATTCAATCCACCATCACACTGTTGGAAGCTCGATAG

Peptide Sequence

PEP ID

VIT_19s0014g04530.t01
PEP Infomation

pep chromosome:12X:19:4850912:4855191:-1 gene:VIT_19s0014g04530 transcript:VIT_19s0014g04530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSLTTVAVIFSYVLSLLRISVAVDTIIVNQNITDGETITSAGGSFELGFFSPGNSKNRY
LGIWYKKVATGTVVWVANRESPLTDSSGVLKVTEQGILVLVNDTNGILWNSSSSRSAQDP
NAQLLESGNLVMRNGNDSDPENFLWQSFDYPCDTLLPGMKFGWNRVTGLDRYLSSWKSTD
DPSKGNFTYGIDLSGFPQPFLRNGLAVKFRAGPWNGVRFGGIPQLTNNSLFTSDYVSNEK
EIYSIYYLVNSSVFVRRVLTPDGYSRRFTWTDKKNEWTLYATAQSDDCDNYAICGVYGIC
KIDESPKCECMKGFRPKFQSNWDMADWSNGCIRSTPLDCQKGDGFVKYSGVKLPDTRNSW
FNESMNLKECASLCLRNCSCTAYANSDIRGGGSGCLLWFGDLIDIRDFTHNGQEFYVRMA
ASELEASSSIKSSSKKKKKHVIIISISTTGIVLLSLVLTLYVLKKRKKQLKRKGYMDHNS
RDENNEGQAHLELPLFDLDTLLNATNNFSSYNKLGEGGFGPVYKGILQEGQEIAVKMMSN
TSRQGLKEFKNEVESIAKLQHRNLVKLLGCCIHGRERMLIYEYMPNKSLDFFIFDQMQSV
ALDWSKRFLIINGIARGLLYLHQDSRLRIIHRDLKAENILLDNEMSPKISDFGIARCFGG
NETEANTTRVAGTLGYMSPEYASEGLYSTKSDVFSFGVLVLEIVSGKRNRGFNHPDHDLN
LLGHAWTLFMEDRSSEFIDASMGNSCILSEVLRSINLGLLCVQRFPDDRPSMHSVALMLG
SEGALPQPKEPCFFIDRNMMEANSPSGIQSTITLLEAR

Transcript Sequence

Transcript ID

VIT_19s0014g04530.t01
Transcript Infomation

cdna chromosome:12X:19:4850912:4855191:-1 gene:VIT_19s0014g04530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGGGAAAATACGAGGAGACTTAGAAAGCACCTAAAATCTCAGGCATTTTCTATCTAGGA
ACGACTATGGATTCTCTTACAACAGTTGCAGTTATCTTCTCTTATGTATTATCCCTCTTA
AGAATCTCCGTGGCAGTAGACACCATAATTGTAAATCAAAACATTACAGATGGTGAGACC
ATCACTTCAGCTGGTGGGAGCTTTGAACTGGGTTTCTTCAGTCCAGGTAATTCCAAGAAC
CGATACTTGGGGATATGGTACAAGAAAGTGGCTACTGGGACAGTGGTATGGGTTGCCAAT
AGAGAAAGTCCACTAACTGATTCATCGGGAGTTTTAAAGGTCACTGAGCAGGGAATTCTT
GTTCTGGTCAACGATACTAATGGAATTCTTTGGAATTCTAGTTCATCACGTTCTGCACAG
GATCCAAACGCTCAGCTTTTGGAATCTGGAAATCTTGTTATGAGAAATGGCAATGATAGT
GACCCGGAAAACTTCCTATGGCAGAGTTTTGATTATCCATGCGATACTCTTCTACCAGGC
ATGAAGTTTGGATGGAACAGAGTAACAGGCCTGGATCGGTACCTGTCATCTTGGAAGAGT
ACGGATGACCCTTCTAAAGGTAATTTTACTTATGGGATTGATCTAAGTGGATTTCCACAA
CCATTTTTGAGGAATGGTTTAGCTGTAAAGTTTCGTGCTGGACCATGGAATGGTGTTCGA
TTTGGTGGAATACCACAATTAACAAACAACTCACTTTTTACGTCTGATTATGTTTCTAAT
GAAAAGGAGATATATTCTATTTATTATCTTGTTAACAGCTCTGTTTTTGTGAGGCGTGTG
TTAACTCCTGATGGTTATTCACGAAGGTTCACATGGACTGATAAAAAAAATGAATGGACT
CTTTACGCAACTGCACAGAGCGATGACTGTGACAATTATGCAATATGTGGAGTATATGGA
ATCTGTAAGATTGATGAATCTCCAAAATGTGAGTGCATGAAGGGATTTAGGCCAAAGTTC
CAAAGCAATTGGGACATGGCAGACTGGTCAAATGGATGCATTCGAAGCACTCCGCTGGAT
TGTCAGAAGGGTGATGGATTTGTAAAGTACTCTGGTGTGAAACTGCCAGACACGCGGAAC
TCCTGGTTTAATGAAAGCATGAACCTTAAGGAATGTGCTTCCCTGTGCTTGAGGAACTGC
TCTTGCACTGCTTATGCAAATTCGGACATCAGAGGAGGAGGAAGTGGATGCTTGCTCTGG
TTTGGTGACTTGATTGATATCAGAGACTTCACTCACAATGGGCAAGAGTTTTATGTAAGG
ATGGCTGCATCAGAATTAGAAGCTTCTTCAAGCATAAAAAGCAGCTCCAAGAAGAAGAAA
AAGCATGTCATTATCATCTCTATATCAACTACAGGAATAGTTCTTTTAAGTCTAGTCCTG
ACCTTGTATGTGCTCAAGAAAAGGAAGAAGCAACTAAAGAGAAAAGGATACATGGATCAT
AATTCAAGAGATGAAAATAATGAAGGCCAAGCGCATTTAGAGTTACCATTATTTGACTTG
GATACATTATTGAATGCCACCAATAACTTTTCTAGTTACAATAAGCTTGGAGAGGGTGGT
TTTGGACCTGTCTATAAGGGAATATTGCAAGAGGGACAAGAAATTGCAGTGAAGATGATG
TCAAACACTTCTAGACAAGGATTAAAAGAGTTCAAAAATGAAGTTGAATCCATTGCAAAA
CTTCAACACCGAAATCTTGTAAAGCTTCTTGGATGCTGCATTCATGGCAGAGAAAGAATG
TTGATCTACGAATACATGCCCAACAAAAGCTTGGACTTTTTCATTTTTGATCAAATGCAA
AGCGTGGCACTAGATTGGTCTAAGCGCTTCCTCATTATCAATGGGATTGCTCGAGGTCTT
CTTTATCTTCATCAAGATTCTAGACTCAGAATAATCCATAGAGACCTTAAAGCAGAAAAC
ATTTTACTAGATAATGAAATGAGCCCCAAAATTTCAGACTTTGGAATAGCAAGATGTTTT
GGAGGAAATGAAACTGAAGCAAACACAACAAGAGTGGCTGGAACATTAGGTTATATGTCT
CCAGAGTATGCAAGTGAAGGATTGTATTCCACAAAATCCGATGTTTTTAGCTTTGGTGTT
TTAGTTCTAGAGATTGTAAGTGGGAAGAGAAATAGAGGATTTAACCACCCAGATCACGAC
CTTAATCTTCTTGGGCATGCGTGGACACTCTTTATGGAAGATAGGTCTTCAGAATTTATT
GATGCATCAATGGGCAACTCTTGCATCCTATCTGAAGTGCTACGTTCAATCAATTTGGGT
CTGCTATGTGTGCAACGTTTCCCAGATGATCGACCAAGCATGCATTCTGTGGCTCTGATG
TTGGGTAGTGAGGGTGCACTACCTCAACCCAAAGAGCCTTGTTTCTTCATTGATAGGAAT
ATGATGGAAGCAAATTCTCCCTCTGGTATTCAATCCACCATCACACTGTTGGAAGCTCGA
TAGAAGATGCTTCATGTTGATGTTTTGTTGTCTTTAGACCTATGACTTCAACTACTTTTG
GCAACTTTTTTCAACCACACTGCTTAACATCCAACAAAAGACTCATCTAAGATGTTATCA
GGTGATTAATCTTTGCTGTTGCTTTTTGTATGGATGATGATAGTTA