Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0014g03800.t01
CDS Infomation

cds chromosome:12X:19:3894331:3895956:-1 gene:VIT_19s0014g03800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCCACAACGATGAATCCAGAAGGCCGGGCATTTTCTATCAAACTATGGCCCCCT
AGCCAGACCACTCGGCTACTGCTTGTGGAACGAATGGCAAACAATCTTTCCACTCCATCC
ATTTTCACTCGAGAGTATGGTAGTCTCAGCAAAGAGGAAGTAAGGGAGAATGCCAAACAG
ATCGAAGAGCCAGATGGTGATGGAGGTTCTGCAGTGCAGCTTTATGCCAAAGAATGCAGT
AAGCTAATCCTCGAAGTTCTTAAAAGAGGCCCTATAACCAAGGTGGATGGAGCGAAGCCA
ACATCTAAGACATTTAATGAAGCCTGTGAAACTGTTTTTGATATATCTAAAGGCCAAAGA
GCATTTGTTGAGGCAGAGGAAGCTGAGGAGCTTTTGAGGCCATTAAAAGAGCCAGGAAAT
TCTTATACTAAGATATGTTTCAGCAATCGAAGCTTTGGTTTAGGCGCAGCCCGTGTTGCA
GAGCCTATCTTGGCTTCTCTCAAGGATCAGTTAAAGGAAGTGGACCTGTCAGATTTTATT
GCTGGGAGATCGGAAGGGGAAGCTCTTGAAGTCATGGCTATATTTTCTGAGGCTCTTGAA
GGTTGTGTTTTGAAGTCTCTGGACCTCTCAAACAATGCTTTGGGTGAGAAGGGTGTTAGG
GCGTTTGGGGCGCTCCTGAAATCACAAAGTAGCTTGGAGGAGCTCTATTTAATGAATGAT
GGGATCTCAGAGGAAGCTGCTCGAGCAGTTTGTGAGTTAATCCCTTCTACTGAGAAGCTT
AGGGTCCTTCAATTTCATAATAATATGACAGGAGATGAAGGGGCACTTGCTATTTCTGAG
GTAGTGAAGCAGTCTCCCATGTTAGAGGATTTTCGATGTTCCTCTACAAGGATAGGCTCC
GACGGAGGAGTTGCCTTATCTGAAGCTCTTCAGACCTTTACCAATCTGAAGAATCTCGAT
CTGCGGGACAACATGTTTGGTGTAGAAGCTGGAGTTGCCCTTAGTAAAGCTCTTGCCAAG
CATGCAGATCTTACCGAGGCTTACCTGAGCTACCTGAACTTGGAAGATGAGGGTGCAGTT
GCTATAGCCAATGTTCTTAAGGAATCTGCTTCTGCACTGGAAGTCTTGGAGATGGCTGGA
AATGATATAACAGCTGAAGCTGCTCCTGCTTTAGCTGCTTGTATAGCAGCAAAGCAGCTT
ATCACAAAGCTGAACTTGGCCGACACTGAACTGAGGGATGAAGGTGCTATCCAAATTAGC
AAGGCATTGGAAGATGGCGATGCTCAATTGAAGGGAGTCGACTTGAGCTCCAATTTCATG
AGAAGGGCTGGGGCTAGGTGCTTGACTCGCGCTGTGGTGCATAAGCCTGGGTTAAAATTG
CTTAACATGAATGGAAATTTCATCTCTGATGAGGGCATTGATGAGGTGAAGAATATATTT
AATGAATTTCCTAATGTTCTTGGATCCTTGGATGAGAATGACCCTGAAGGAGAAGATGAT
AACGAATCTGGAGAGGGTGAAGATGAAGGGGATGAATTAGAATCGAAATTGAAGAATCTC
GAGGTCCATCAGGAAGACTAG

Peptide Sequence

PEP ID

VIT_19s0014g03800.t01
PEP Infomation

pep chromosome:12X:19:3894331:3895956:-1 gene:VIT_19s0014g03800 transcript:VIT_19s0014g03800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDATTMNPEGRAFSIKLWPPSQTTRLLLVERMANNLSTPSIFTREYGSLSKEEVRENAKQ
IEEPDGDGGSAVQLYAKECSKLILEVLKRGPITKVDGAKPTSKTFNEACETVFDISKGQR
AFVEAEEAEELLRPLKEPGNSYTKICFSNRSFGLGAARVAEPILASLKDQLKEVDLSDFI
AGRSEGEALEVMAIFSEALEGCVLKSLDLSNNALGEKGVRAFGALLKSQSSLEELYLMND
GISEEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGS
DGGVALSEALQTFTNLKNLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAV
AIANVLKESASALEVLEMAGNDITAEAAPALAACIAAKQLITKLNLADTELRDEGAIQIS
KALEDGDAQLKGVDLSSNFMRRAGARCLTRAVVHKPGLKLLNMNGNFISDEGIDEVKNIF
NEFPNVLGSLDENDPEGEDDNESGEGEDEGDELESKLKNLEVHQED

Transcript Sequence

Transcript ID

VIT_19s0014g03800.t01
Transcript Infomation

cdna chromosome:12X:19:3894331:3895956:-1 gene:VIT_19s0014g03800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGCAATGGATGCCACAACGATGAATCCAGAAGGCCGGGCATTTTCTATCAAACTATGGC
CCCCTAGCCAGACCACTCGGCTACTGCTTGTGGAACGAATGGCAAACAATCTTTCCACTC
CATCCATTTTCACTCGAGAGTATGGTAGTCTCAGCAAAGAGGAAGTAAGGGAGAATGCCA
AACAGATCGAAGAGCCAGATGGTGATGGAGGTTCTGCAGTGCAGCTTTATGCCAAAGAAT
GCAGTAAGCTAATCCTCGAAGTTCTTAAAAGAGGCCCTATAACCAAGGTGGATGGAGCGA
AGCCAACATCTAAGACATTTAATGAAGCCTGTGAAACTGTTTTTGATATATCTAAAGGCC
AAAGAGCATTTGTTGAGGCAGAGGAAGCTGAGGAGCTTTTGAGGCCATTAAAAGAGCCAG
GAAATTCTTATACTAAGATATGTTTCAGCAATCGAAGCTTTGGTTTAGGCGCAGCCCGTG
TTGCAGAGCCTATCTTGGCTTCTCTCAAGGATCAGTTAAAGGAAGTGGACCTGTCAGATT
TTATTGCTGGGAGATCGGAAGGGGAAGCTCTTGAAGTCATGGCTATATTTTCTGAGGCTC
TTGAAGGTTGTGTTTTGAAGTCTCTGGACCTCTCAAACAATGCTTTGGGTGAGAAGGGTG
TTAGGGCGTTTGGGGCGCTCCTGAAATCACAAAGTAGCTTGGAGGAGCTCTATTTAATGA
ATGATGGGATCTCAGAGGAAGCTGCTCGAGCAGTTTGTGAGTTAATCCCTTCTACTGAGA
AGCTTAGGGTCCTTCAATTTCATAATAATATGACAGGAGATGAAGGGGCACTTGCTATTT
CTGAGGTAGTGAAGCAGTCTCCCATGTTAGAGGATTTTCGATGTTCCTCTACAAGGATAG
GCTCCGACGGAGGAGTTGCCTTATCTGAAGCTCTTCAGACCTTTACCAATCTGAAGAATC
TCGATCTGCGGGACAACATGTTTGGTGTAGAAGCTGGAGTTGCCCTTAGTAAAGCTCTTG
CCAAGCATGCAGATCTTACCGAGGCTTACCTGAGCTACCTGAACTTGGAAGATGAGGGTG
CAGTTGCTATAGCCAATGTTCTTAAGGAATCTGCTTCTGCACTGGAAGTCTTGGAGATGG
CTGGAAATGATATAACAGCTGAAGCTGCTCCTGCTTTAGCTGCTTGTATAGCAGCAAAGC
AGCTTATCACAAAGCTGAACTTGGCCGACACTGAACTGAGGGATGAAGGTGCTATCCAAA
TTAGCAAGGCATTGGAAGATGGCGATGCTCAATTGAAGGGAGTCGACTTGAGCTCCAATT
TCATGAGAAGGGCTGGGGCTAGGTGCTTGACTCGCGCTGTGGTGCATAAGCCTGGGTTAA
AATTGCTTAACATGAATGGAAATTTCATCTCTGATGAGGGCATTGATGAGGTGAAGAATA
TATTTAATGAATTTCCTAATGTTCTTGGATCCTTGGATGAGAATGACCCTGAAGGAGAAG
ATGATAACGAATCTGGAGAGGGTGAAGATGAAGGGGATGAATTAGAATCGAAATTGAAGA
ATCTCGAGGTCCATCAGGAAGACTAG