Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0014g03400.t01
CDS Infomation

cds chromosome:12X:19:3558579:3561635:1 gene:VIT_19s0014g03400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAAGTGAAATGGGGGCCTTTGATTCTAGCCGTTATTCTTTTGGGGTTCATTGGC
CATGGATCATATGCCTCATTCACCCCCGTTGATAACTACTTAATTGCCTGTGGATCTTCA
AAGAACCTCACATTCCAAGGTCGTACTTTTGTTCCTGAAGTGCAATCTTCAATTGTATTG
AAAAGTCAAGGAAATTCTGTCACTGCTGTCTCCAGTTCCACTGCCTTGCCTCCCATTTAT
CAATCTGCTCGTATTTTCTCCGGGATAGCTTCTTACAAATTTGAAATTGAGCAGGAAGGG
CGGCACTGGGTTCGTCTCTATTTTTACCCTATTTCCAACTCCAGCCATGACTTGACGTCA
GCCTCAATAACTGTAGTCACTGATAGTTTTGTGCTCTTGAACAATTTCACTTTCAAGAAC
TATAATCGTTCCTACTTGTTCAAGGAGTATGCAATCAATGTGACTTCGGATACCTTGACC
CTCACCTTCATCCCTTCAAACAATTCGGTTGCTTTTGTCAATGCGATCGAAGTTGTCTCT
GTTCCAAACGAGATTTTTCCTGACCAGGCTCTGGCTCTGTCCCCGTCTGCTCCTTTTAGT
GGCCTTTCTGAACTTGCCCTTGAAACTGTCTACCGGTTGAATATGGGGGGTCCTTTGCTC
ACTGCTCAAAATGATACACTTGGAAGAACTTGGGAGAATGATGAGAAATACCTCCATGTG
AACAGCTCTGCCAAGAATCTTTCGGTGAACCCTGGAAACATAAAATATACTACTGCTGTC
ACAACAGAAACAGCGCCGAATTTGGTTTATTCCACTGCCGAATCCATGGGTAATGCAAAT
CAATGGGAACTTCAATATAACTTGGGTTTTCTCTACTTCATGTATTTTGTTCGGGTGCAT
TTCTGTGACATTTTGAGCACGTCTCTGAACAATCTTGTCTTCAACTTGTTCATAAATTCT
GATATTGCTCTGGAGAGTCTTGATCTCTCATCCTTAACTGGTGATTTGAGTGTACCGTAT
TACAAAGACTTCATCTCCAACTCTTCAGCAGATTCAGATGTTTTGACTGTTAGTGTGGGT
CCAGATACAATGGCTGATGTTACTAATGCAATTATGAATGGCTTGGAGATCATGAGGATC
AGCAATGGAGCTAAAAGCTTGGATGGGCTTTCTTCAGTTGAGAGTCTCCTTCCCCAACCA
CCCACAAAAAGGAACATGATAGGAATCATTATTGGTTGTGTTGTGGGAGCTTCTGTTGCT
GTGGTGTTCATAATTCTCTGTATTTGCTGCTTTGTTGCCTGTAGGTCGAAGACCCCCACC
CAGGGGCATCCATGGCTTCCCTTGCCCTTATATGGAAACTCCCAGACCATGACGAAGATG
TCCACGACTTCTCAAAAGAGTGGAACAGCGAGCTGCATCTCATTAGCTTCCACCAATCTT
GGCCGGCTCTTCATGTTCCAAGAAATCATGGATGCAACAAACAAATTCGATGAGAGCCTG
CTTCTTGGAGTTGGTGGTTTTGGTAGGGTCTACAAAGGAACACTTGAAGATGGGACTAAA
GTAGCTGTCAAAAGAGGAAACCCCAGATCTGAACAAGGTCTTGCTGAATTCCGAACTGAA
ATTGAAATGCTATCCAAGCTCCGTCACCGCCACCTTGTCTCTCTTATAGGCTATTGTGAT
GAACGATCAGAGATGATTCTGGTTTATGAGTACATGGCTAATGGTCCCCTAAGGAGCCAT
CTTTATGGAACAGATCTACCGTCTCTCTCCTGGAAGCAACGACTTGAAATTTGCATTGGA
GCTGCAAGGGGGCTTCATTATCTTCACACAGGTGCAGCTCAGAGCATAATTCACCGTGAT
GTGAAGACAACAAACATTCTCTTGGATGAGAATTTTGTAGCAAAAGTTGCTGATTTTGGC
CTCTCAAAGACTGGTCCTGCCCTGGATCAGACCCATGTAAGCACTGCTGTTAAGGGTAGT
TTTGGGTACCTTGATCCTGAATACTTTAGAAGGCAGCAGCTCACAGAAAAATCTGATGTG
TATTCATTTGGTGTGGTCCTAATGGAAGTCCTCTGCACCAGACCAGCTTTAAACCCTGTT
CTACCAAGGGAGCAGGTTAATATAGCAGAATGGGCAATGAGCTGGCAAAAGAAGGGTATG
CTGGATCAAATCATGGATCCAAATCTGGTTGGGAAGGTGAATCCAGCTTCTCTTAAGAAG
TTCGGAGAGACAGCTGAGAAGTGCTTGGCTGAGCATGGGGTTGACAGGCCGTCAATGGGG
GATGTCTTGTGGAATCTAGAATATGCTCTCCAGCTTGAGGAGACGTCATTGGCTCTTACA
GAACCTGAAGATAACAGCACAAATCATATTGCAGGTATTCAGTTGACACCAATCGAGCAA
TTTGAGAACAGCGTTAGTATGATTGATGGGGTGCACTCTGGCACAGACGATGATGCAGAA
GATGCAGCTACAAGTGCTGTATTCTCTCAGCTAGTAAACCCTCGTGGAAGATGA

Peptide Sequence

PEP ID

VIT_19s0014g03400.t01
PEP Infomation

pep chromosome:12X:19:3558579:3561635:1 gene:VIT_19s0014g03400 transcript:VIT_19s0014g03400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKVKWGPLILAVILLGFIGHGSYASFTPVDNYLIACGSSKNLTFQGRTFVPEVQSSIVL
KSQGNSVTAVSSSTALPPIYQSARIFSGIASYKFEIEQEGRHWVRLYFYPISNSSHDLTS
ASITVVTDSFVLLNNFTFKNYNRSYLFKEYAINVTSDTLTLTFIPSNNSVAFVNAIEVVS
VPNEIFPDQALALSPSAPFSGLSELALETVYRLNMGGPLLTAQNDTLGRTWENDEKYLHV
NSSAKNLSVNPGNIKYTTAVTTETAPNLVYSTAESMGNANQWELQYNLGFLYFMYFVRVH
FCDILSTSLNNLVFNLFINSDIALESLDLSSLTGDLSVPYYKDFISNSSADSDVLTVSVG
PDTMADVTNAIMNGLEIMRISNGAKSLDGLSSVESLLPQPPTKRNMIGIIIGCVVGASVA
VVFIILCICCFVACRSKTPTQGHPWLPLPLYGNSQTMTKMSTTSQKSGTASCISLASTNL
GRLFMFQEIMDATNKFDESLLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGLAEFRTE
IEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPSLSWKQRLEICIG
AARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGS
FGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGM
LDQIMDPNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSLALT
EPEDNSTNHIAGIQLTPIEQFENSVSMIDGVHSGTDDDAEDAATSAVFSQLVNPRGR

Transcript Sequence

Transcript ID

VIT_19s0014g03400.t01
Transcript Infomation

cdna chromosome:12X:19:3558579:3561635:1 gene:VIT_19s0014g03400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAAGTGAAATGGGGGCCTTTGATTCTAGCCGTTATTCTTTTGGGGTTCATTGGC
CATGGATCATATGCCTCATTCACCCCCGTTGATAACTACTTAATTGCCTGTGGATCTTCA
AAGAACCTCACATTCCAAGGTCGTACTTTTGTTCCTGAAGTGCAATCTTCAATTGTATTG
AAAAGTCAAGGAAATTCTGTCACTGCTGTCTCCAGTTCCACTGCCTTGCCTCCCATTTAT
CAATCTGCTCGTATTTTCTCCGGGATAGCTTCTTACAAATTTGAAATTGAGCAGGAAGGG
CGGCACTGGGTTCGTCTCTATTTTTACCCTATTTCCAACTCCAGCCATGACTTGACGTCA
GCCTCAATAACTGTAGTCACTGATAGTTTTGTGCTCTTGAACAATTTCACTTTCAAGAAC
TATAATCGTTCCTACTTGTTCAAGGAGTATGCAATCAATGTGACTTCGGATACCTTGACC
CTCACCTTCATCCCTTCAAACAATTCGGTTGCTTTTGTCAATGCGATCGAAGTTGTCTCT
GTTCCAAACGAGATTTTTCCTGACCAGGCTCTGGCTCTGTCCCCGTCTGCTCCTTTTAGT
GGCCTTTCTGAACTTGCCCTTGAAACTGTCTACCGGTTGAATATGGGGGGTCCTTTGCTC
ACTGCTCAAAATGATACACTTGGAAGAACTTGGGAGAATGATGAGAAATACCTCCATGTG
AACAGCTCTGCCAAGAATCTTTCGGTGAACCCTGGAAACATAAAATATACTACTGCTGTC
ACAACAGAAACAGCGCCGAATTTGGTTTATTCCACTGCCGAATCCATGGGTAATGCAAAT
CAATGGGAACTTCAATATAACTTGGGTTTTCTCTACTTCATGTATTTTGTTCGGGTGCAT
TTCTGTGACATTTTGAGCACGTCTCTGAACAATCTTGTCTTCAACTTGTTCATAAATTCT
GATATTGCTCTGGAGAGTCTTGATCTCTCATCCTTAACTGGTGATTTGAGTGTACCGTAT
TACAAAGACTTCATCTCCAACTCTTCAGCAGATTCAGATGTTTTGACTGTTAGTGTGGGT
CCAGATACAATGGCTGATGTTACTAATGCAATTATGAATGGCTTGGAGATCATGAGGATC
AGCAATGGAGCTAAAAGCTTGGATGGGCTTTCTTCAGTTGAGAGTCTCCTTCCCCAACCA
CCCACAAAAAGGAACATGATAGGAATCATTATTGGTTGTGTTGTGGGAGCTTCTGTTGCT
GTGGTGTTCATAATTCTCTGTATTTGCTGCTTTGTTGCCTGTAGGTCGAAGACCCCCACC
CAGGGGCATCCATGGCTTCCCTTGCCCTTATATGGAAACTCCCAGACCATGACGAAGATG
TCCACGACTTCTCAAAAGAGTGGAACAGCGAGCTGCATCTCATTAGCTTCCACCAATCTT
GGCCGGCTCTTCATGTTCCAAGAAATCATGGATGCAACAAACAAATTCGATGAGAGCCTG
CTTCTTGGAGTTGGTGGTTTTGGTAGGGTCTACAAAGGAACACTTGAAGATGGGACTAAA
GTAGCTGTCAAAAGAGGAAACCCCAGATCTGAACAAGGTCTTGCTGAATTCCGAACTGAA
ATTGAAATGCTATCCAAGCTCCGTCACCGCCACCTTGTCTCTCTTATAGGCTATTGTGAT
GAACGATCAGAGATGATTCTGGTTTATGAGTACATGGCTAATGGTCCCCTAAGGAGCCAT
CTTTATGGAACAGATCTACCGTCTCTCTCCTGGAAGCAACGACTTGAAATTTGCATTGGA
GCTGCAAGGGGGCTTCATTATCTTCACACAGGTGCAGCTCAGAGCATAATTCACCGTGAT
GTGAAGACAACAAACATTCTCTTGGATGAGAATTTTGTAGCAAAAGTTGCTGATTTTGGC
CTCTCAAAGACTGGTCCTGCCCTGGATCAGACCCATGTAAGCACTGCTGTTAAGGGTAGT
TTTGGGTACCTTGATCCTGAATACTTTAGAAGGCAGCAGCTCACAGAAAAATCTGATGTG
TATTCATTTGGTGTGGTCCTAATGGAAGTCCTCTGCACCAGACCAGCTTTAAACCCTGTT
CTACCAAGGGAGCAGGTTAATATAGCAGAATGGGCAATGAGCTGGCAAAAGAAGGGTATG
CTGGATCAAATCATGGATCCAAATCTGGTTGGGAAGGTGAATCCAGCTTCTCTTAAGAAG
TTCGGAGAGACAGCTGAGAAGTGCTTGGCTGAGCATGGGGTTGACAGGCCGTCAATGGGG
GATGTCTTGTGGAATCTAGAATATGCTCTCCAGCTTGAGGAGACGTCATTGGCTCTTACA
GAACCTGAAGATAACAGCACAAATCATATTGCAGGTATTCAGTTGACACCAATCGAGCAA
TTTGAGAACAGCGTTAGTATGATTGATGGGGTGCACTCTGGCACAGACGATGATGCAGAA
GATGCAGCTACAAGTGCTGTATTCTCTCAGCTAGTAAACCCTCGTGGAAGATGAGAAGAA
ACAATTTCCACGATATTGTGATCTCAGCTGCTGGATGCCCCACTAAAGATTTGGCTGACC
TGGCCTCGAGAGTACAATCTCCAAGTAAATGCATGAAGGTTATTTCTAAGTTCATTGTTC
TGGGCTTTTACCTCATTTTTTCATCCATAATATGTTTTCGGTTGTAATATAGTTGATTGA
TGGGTGCCAATTAATCCATCAGAAATGGTGCCTAGACCACAAGGATTCTATTAGTGTCTT
GATTGAATTCATTCTGAGTATATGGATTGTATTGG