Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0014g02590.t01
CDS Infomation

cds chromosome:12X:19:2667926:2670239:-1 gene:VIT_19s0014g02590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGTTCCACTATCAGTCTCAGTCACTCCTATACTAAGCCAGAGGATTGATCCTGAG
GTGGCTCGCCACGAAGCCACATATCATCCTAACTTCTGGGGTGATCGTTTCCTCCACTAC
AATCCTGATGATGATTTCTGTGGAACCCATGCTTGTAAAGAACAACAAATTCAAGAACTG
AAAGAAGAAGTGCGGAAGAGCCTGGAAGCTACTGCTGGGAACACTTCACAGCTGCTGAAG
TTGATAGATTCCATCCAACGCTTGGGATTGGCTTACCACTTTGAAAGGGAGATTGAAGAA
GCATTGAAGGCCATGTATCAAACTTATACTCTGGTTGATGATAATGATCACCTCACTACA
GTTTCCCTTCTGTTCCGACTACTAAGACAGGAAGGTTACCACATTCCATCAGATGTATTT
AAGAAGTTCATGGATGAGGGAGGCAACTTCAAGGAATCATTGGTGGGTGACTTACCAGGC
ATGCTAGCTTTATATGAAGCTGCACATTTAATGGTGCATGGAGAAGACATACTAGATGAA
GCCCTGGGTTTCACCACTGCTCACCTTCAGTCCATGGCAATTGATTCAGATAATCCTCTC
ACAAAACAAGTGATTCGTGCTCTAAAGCGCCCGATTCGCAAGGGCTTACCAAGGGTGGAG
GCAAGGCATTACATTACCATCTACCAAGAAGACGATTCACATAATGAATCTTTACTCAAG
CTTGCAAAGTTGGATTACAACATGTTGCAGTCACTCCACAGGAAAGAGCTAAGTGAGATC
ACTAAGTGGTGGAAAGGTTTAGACTTTGCGACAAAGCTACCTTTTGCGAGGGACAGGATA
GTGGAAGGCTACTTTTGGATCTTGGGAGTGTACTTTGAACCCCAATATTACCTTGCTAGA
AGGATCTTAATGAAAGTATTCGGGGTGCTATCCATTGTAGATGATATATATGATGCGTAT
GGGACATTTGAAGAACTCAAACTCTTTACAGAAGCAATTGAGAGATGGGATGCCAGCAGC
ATAGATCAACTGCCAGATTATATGAAGGTGTGTTATCAGGCTCTCTTAGATGTCTATGAA
GAAATGGAGGAAGAGATGACGAAGCAAGGAAAACTGTACCGTGTTCACTACGCACAAGCA
GCGTTAAAAAGGCAAGTCCAAGCCTACCTTCTTGAAGCCAAATGGTTGAAGCAAGAATAT
ATACCAAGAATGGATGAGTACATGAGCAACGCGCTGGTAAGCTCTGCCTGCTCTATGCTT
ACAACCACATCTTTCGTCGGTATGGGAGATATAGTAACCAAGGAGGCCTTCGATTGGGTT
TTCAGTGACCCTAAGATGATTAGAGCTTCAAACGTCATTTGCAGGCTTATGGATGACATA
GTTTCCCATGAGTTTGAGCAAAAAAGAGGGCATGTTGCCTCAGCCGTAGAATGCTACATG
AAGCAATATGGGGTTTCAAAGGAAGAAGCTTATGATGAGTTCAAGAAGCAAGTAGAGAGT
GCATGGAAGGATAATAATGAGGAGTTCCTGCAACCTACAGCAGTGCCAGTTCCACTCCTC
ACCCGTGTTCTGAATTTTAGCCGGATGATGGACGTCTTGTACAAGGACGAAGATGAGTAC
ACGCTGGTTGGACCATTGATGAAAGATCTGGTTGCAGGGATGCTCATAGATCCTGTGCCA
ATGTAA

Peptide Sequence

PEP ID

VIT_19s0014g02590.t01
PEP Infomation

pep chromosome:12X:19:2667926:2670239:-1 gene:VIT_19s0014g02590 transcript:VIT_19s0014g02590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVPLSVSVTPILSQRIDPEVARHEATYHPNFWGDRFLHYNPDDDFCGTHACKEQQIQEL
KEEVRKSLEATAGNTSQLLKLIDSIQRLGLAYHFEREIEEALKAMYQTYTLVDDNDHLTT
VSLLFRLLRQEGYHIPSDVFKKFMDEGGNFKESLVGDLPGMLALYEAAHLMVHGEDILDE
ALGFTTAHLQSMAIDSDNPLTKQVIRALKRPIRKGLPRVEARHYITIYQEDDSHNESLLK
LAKLDYNMLQSLHRKELSEITKWWKGLDFATKLPFARDRIVEGYFWILGVYFEPQYYLAR
RILMKVFGVLSIVDDIYDAYGTFEELKLFTEAIERWDASSIDQLPDYMKVCYQALLDVYE
EMEEEMTKQGKLYRVHYAQAALKRQVQAYLLEAKWLKQEYIPRMDEYMSNALVSSACSML
TTTSFVGMGDIVTKEAFDWVFSDPKMIRASNVICRLMDDIVSHEFEQKRGHVASAVECYM
KQYGVSKEEAYDEFKKQVESAWKDNNEEFLQPTAVPVPLLTRVLNFSRMMDVLYKDEDEY
TLVGPLMKDLVAGMLIDPVPM

Transcript Sequence

Transcript ID

VIT_19s0014g02590.t01
Transcript Infomation

cdna chromosome:12X:19:2667926:2670239:-1 gene:VIT_19s0014g02590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGTTCCACTATCAGTCTCAGTCACTCCTATACTAAGCCAGAGGATTGATCCTGAG
GTGGCTCGCCACGAAGCCACATATCATCCTAACTTCTGGGGTGATCGTTTCCTCCACTAC
AATCCTGATGATGATTTCTGTGGAACCCATGCTTGTAAAGAACAACAAATTCAAGAACTG
AAAGAAGAAGTGCGGAAGAGCCTGGAAGCTACTGCTGGGAACACTTCACAGCTGCTGAAG
TTGATAGATTCCATCCAACGCTTGGGATTGGCTTACCACTTTGAAAGGGAGATTGAAGAA
GCATTGAAGGCCATGTATCAAACTTATACTCTGGTTGATGATAATGATCACCTCACTACA
GTTTCCCTTCTGTTCCGACTACTAAGACAGGAAGGTTACCACATTCCATCAGATGTATTT
AAGAAGTTCATGGATGAGGGAGGCAACTTCAAGGAATCATTGGTGGGTGACTTACCAGGC
ATGCTAGCTTTATATGAAGCTGCACATTTAATGGTGCATGGAGAAGACATACTAGATGAA
GCCCTGGGTTTCACCACTGCTCACCTTCAGTCCATGGCAATTGATTCAGATAATCCTCTC
ACAAAACAAGTGATTCGTGCTCTAAAGCGCCCGATTCGCAAGGGCTTACCAAGGGTGGAG
GCAAGGCATTACATTACCATCTACCAAGAAGACGATTCACATAATGAATCTTTACTCAAG
CTTGCAAAGTTGGATTACAACATGTTGCAGTCACTCCACAGGAAAGAGCTAAGTGAGATC
ACTAAGTGGTGGAAAGGTTTAGACTTTGCGACAAAGCTACCTTTTGCGAGGGACAGGATA
GTGGAAGGCTACTTTTGGATCTTGGGAGTGTACTTTGAACCCCAATATTACCTTGCTAGA
AGGATCTTAATGAAAGTATTCGGGGTGCTATCCATTGTAGATGATATATATGATGCGTAT
GGGACATTTGAAGAACTCAAACTCTTTACAGAAGCAATTGAGAGATGGGATGCCAGCAGC
ATAGATCAACTGCCAGATTATATGAAGGTGTGTTATCAGGCTCTCTTAGATGTCTATGAA
GAAATGGAGGAAGAGATGACGAAGCAAGGAAAACTGTACCGTGTTCACTACGCACAAGCA
GCGTTAAAAAGGCAAGTCCAAGCCTACCTTCTTGAAGCCAAATGGTTGAAGCAAGAATAT
ATACCAAGAATGGATGAGTACATGAGCAACGCGCTGGTAAGCTCTGCCTGCTCTATGCTT
ACAACCACATCTTTCGTCGGTATGGGAGATATAGTAACCAAGGAGGCCTTCGATTGGGTT
TTCAGTGACCCTAAGATGATTAGAGCTTCAAACGTCATTTGCAGGCTTATGGATGACATA
GTTTCCCATGAGTTTGAGCAAAAAAGAGGGCATGTTGCCTCAGCCGTAGAATGCTACATG
AAGCAATATGGGGTTTCAAAGGAAGAAGCTTATGATGAGTTCAAGAAGCAAGTAGAGAGT
GCATGGAAGGATAATAATGAGGAGTTCCTGCAACCTACAGCAGTGCCAGTTCCACTCCTC
ACCCGTGTTCTGAATTTTAGCCGGATGATGGACGTCTTGTACAAGGACGAAGATGAGTAC
ACGCTGGTTGGACCATTGATGAAAGATCTGGTTGCAGGGATGCTCATAGATCCTGTGCCA
ATGTAA