Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0014g01250.t01
CDS Infomation

cds chromosome:12X:19:1360642:1367222:1 gene:VIT_19s0014g01250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H2M7]
Sequence

ATGTCGTTGCGGAGATCGATCCTCTCTCGAAGGACCTTCGCGCTATCCAAATCCTTCAAG
GAATTTAGAACCCTAGACTCCTCCGAGTCGAGATCCGAGCCTGCGCTGCGGCCCAGAATC
GTAGACGATGACGTTTCCGACGAGGAGGAGGAGGATTCCGGTGACGGCGCCGCCGGAGAC
TCTGGAATCCGGAGGGTGGACTCCGGACGCGGCGATTCGTGGTCCACAATGCTACCGGAG
CTGCTCGGGGAGATCATTCAGCGAGTGGAAGCAAGCGAGAACCGGTGGCCGACTCGCAGA
AACGTCGTGTCGTGCGCCTGTGTGTGCAAGAGGTGGAGAGATATTACCAGAGAGGTCGTG
AGGTCTCGTCTCGATAGTGGCCAGATCACTTTCCCTTCTTGCCTCAAACAGCCGGGACCA
CGCAACTCTGAACATCAATGTCTTATAAAACGGAACAAGAAGAATTCAACGTTTTACCTT
TACCTTGCTCTTAGTTCGTCATTCACAGATAAGGGGAAGTTTCTCTTAGCTGCTCGAAGA
TATAGGCATGGTGCTCACACCGAGTACATAATATCACTTGATGCTGATGACATATCTCAA
GGAAGTAATGCTTATGTTGGAAAGTTAAGGTCGGATTTCCTTGGAACCAACTTCGCAATT
TATGACAGCCAGCCCCCACACAGCGGTGCAAAGCCCTCAAGCAGCAGAGCTGGCCGACGT
TTCGCGAGCAAGCAAATAAGCCCCCAAGTTCCAGCAGGCAACTTCGAGGTTGGACAGGTC
TCTTACAAGTTCAACCTCTTGAAATCAAGAGGACCAAGGAGGATGGTCTGCTCACTCCGC
TGTCCATCCTCAGGAGAAACTGCCAACAACAAATCTCCAGACAACTCTGACTTGAAAAAA
CCCGACCCTGCTGCTCCTGGGTGCTCAATCTTGAAGAATAAAGCACCAAGGTGGCATGAA
CATCTGCAATGTTGGTGCTTGAATTTCCATGGTCGGGTGACTGTAGCTTCTGTGAAGAAC
TTCCAACTAGTTGCAACAGTTGACCAAAGCCAGCCAGGCGGTAAAGGAGATGAAGAAACT
GTCCTCCTCCAGTTTGGTAAGGTCGGCAACGACACTTTCACCATGGACTATCGGCAACCC
TTATCAGCCTTCCTCGCATTTGCCATTTGCCTTACTAGCTTTGGTACGAAACTGGCCTGT
GAGTGA

Peptide Sequence

PEP ID

VIT_19s0014g01250.t01
PEP Infomation

pep chromosome:12X:19:1360642:1367222:1 gene:VIT_19s0014g01250 transcript:VIT_19s0014g01250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H2M7]
Sequence

MSLRRSILSRRTFALSKSFKEFRTLDSSESRSEPALRPRIVDDDVSDEEEEDSGDGAAGD
SGIRRVDSGRGDSWSTMLPELLGEIIQRVEASENRWPTRRNVVSCACVCKRWRDITREVV
RSRLDSGQITFPSCLKQPGPRNSEHQCLIKRNKKNSTFYLYLALSSSFTDKGKFLLAARR
YRHGAHTEYIISLDADDISQGSNAYVGKLRSDFLGTNFAIYDSQPPHSGAKPSSSRAGRR
FASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRMVCSLRCPSSGETANNKSPDNSDLKK
PDPAAPGCSILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEET
VLLQFGKVGNDTFTMDYRQPLSAFLAFAICLTSFGTKLACE

Transcript Sequence

Transcript ID

VIT_19s0014g01250.t01
Transcript Infomation

cdna chromosome:12X:19:1360642:1367222:1 gene:VIT_19s0014g01250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H2M7]
Sequence

GTGGTTCTCTTTTTCGCTGAATGAGACGGAGAGCCCAAAACGATGTCGTTGCGGAGATCG
ATCCTCTCTCGAAGGACCTTCGCGCTATCCAAATCCTTCAAGGAATTTAGAACCCTAGAC
TCCTCCGAGTCGAGATCCGAGCCTGCGCTGCGGCCCAGAATCGTAGACGATGACGTTTCC
GACGAGGAGGAGGAGGATTCCGGTGACGGCGCCGCCGGAGACTCTGGAATCCGGAGGGTG
GACTCCGGACGCGGCGATTCGTGGTCCACAATGCTACCGGAGCTGCTCGGGGAGATCATT
CAGCGAGTGGAAGCAAGCGAGAACCGGTGGCCGACTCGCAGAAACGTCGTGTCGTGCGCC
TGTGTGTGCAAGAGGTGGAGAGATATTACCAGAGAGGTCGTGAGGTCTCGTCTCGATAGT
GGCCAGATCACTTTCCCTTCTTGCCTCAAACAGCCGGGACCACGCAACTCTGAACATCAA
TGTCTTATAAAACGGAACAAGAAGAATTCAACGTTTTACCTTTACCTTGCTCTTAGTTCG
TCATTCACAGATAAGGGGAAGTTTCTCTTAGCTGCTCGAAGATATAGGCATGGTGCTCAC
ACCGAGTACATAATATCACTTGATGCTGATGACATATCTCAAGGAAGTAATGCTTATGTT
GGAAAGTTAAGGTCGGATTTCCTTGGAACCAACTTCGCAATTTATGACAGCCAGCCCCCA
CACAGCGGTGCAAAGCCCTCAAGCAGCAGAGCTGGCCGACGTTTCGCGAGCAAGCAAATA
AGCCCCCAAGTTCCAGCAGGCAACTTCGAGGTTGGACAGGTCTCTTACAAGTTCAACCTC
TTGAAATCAAGAGGACCAAGGAGGATGGTCTGCTCACTCCGCTGTCCATCCTCAGGAGAA
ACTGCCAACAACAAATCTCCAGACAACTCTGACTTGAAAAAACCCGACCCTGCTGCTCCT
GGGTGCTCAATCTTGAAGAATAAAGCACCAAGGTGGCATGAACATCTGCAATGTTGGTGC
TTGAATTTCCATGGTCGGGTGACTGTAGCTTCTGTGAAGAACTTCCAACTAGTTGCAACA
GTTGACCAAAGCCAGCCAGGCGGTAAAGGAGATGAAGAAACTGTCCTCCTCCAGTTTGGT
AAGGTCGGCAACGACACTTTCACCATGGACTATCGGCAACCCTTATCAGCCTTCCTCGCA
TTTGCCATTTGCCTTACTAGCTTTGGTACGAAACTGGCCTGTGAGTGACAGTATTTTCCT
ACTACACGTATCCATGAAAGAAATGGGTGGTGGGTGTTGTTTTAATATATGTTTTTCGAT
GGTTGTCGCTTTCCATACTACCAAACTTGTTCAGTTTGGTTTGGGGAAAGCTGTGTAAAT
GCTGTTATTTGTATGAATGTATGACTTGGACTTTGAAATTACTTGTAACAAACCGTTCTA
TTCGGATGCTAA