Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0014g00560.t01
CDS Infomation

cds chromosome:12X:19:572717:579014:1 gene:VIT_19s0014g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGGAAAATACGTGGCATCATCGTCTCTACCAAACCCTAGAGGCGGAAGCACCAGA
TCTCCGATCCTCCTTCTCACCTTCTCTCTCCTCTCCCTTTCTCTCCTTCTCTTTCTCTTC
TCCATCCTCCCCTCCCATCCAAACCCCAACCCTAACCGTAACCCTAACCTTAACACTCTT
CTACCTGAATCCAGCTTCGTTGCTTCTCTCGAACACTTCCTCATTTCCAAGTCCCCCAGA
TCTCCTCCAATTCGAGATGATACTGTTGGTTCAGATGACCCGGAGGCAGTGAAGAAGCTC
GATGATTTGGTGTGGCAGAGGGAGATTCGGAGGGTGTACGAGGACCCGTACTATCCGGCG
GCGTCGGGGGTGACGTCGGCCATTAGGGTGTATGTGTACGAGATGCCGGCGAAGTTTACG
TATGATCTCCTCTGGTTGTTTCGGAACACTTATAAGGAGACTTCGAATCGTACTTCCAAT
GGTAGCCCCGTGCATCGCCTGATTGAGCAGCATTCTATTGATTACTGGCTATGGGCGGAT
TTGACTGCACCAGAATCAGAAAGGCTTTTGAAAAATGTTGTCAGAGTGCATAGGCAGGAG
GAGGCGGACCTATTCTACATTCCATTCTTCACAACCATCAGCTTCTTCTTGTTGGAGCCA
GAGCAGTGGAAGCCACTTTACAGGGAAGCTTTGAAGTGGGTGACTGATCAACCTGCATGG
AAACGGTCTGAAGGGAGGGACCACATACTTCCAGTTCATCATCCATGGTCTTTCAAGACT
GTTCGGAAATCCATGAAGAATGCAATTTGGCTGTTACCAGACATGGACTCCACAGGGAAC
TGGTACAAGCCTGGACAAGTTTCACTTGAAAAAGATCTAATACTTCCTTATGTTCCAAAT
GTCGATTTGTGTGATGCCAAATGCTCATCGGAAAGTGAATCAAAGAGGAAGACACTTCTA
TTCTTCCGTGGGAGGCTTAAAAGGAATGCTGGGGGGAAGATTCGTGCTAAGCTTATGGCA
GAACTAAGTGGTGATGATGGTGTGGTTATACAGGAGGGAACTGCTGGGGAAGGGGGGAAA
GAAGCTGCCCAGAGAGGGATGCGCAAGTCTATTTTTTGCCTAAGTCCAGCTGGTGACACT
CCATCCTCTGCTAGATTGTTTGACGCTATTGTTAGTGGGTGCATCCCTGTTATAGTTAGT
GATGAACTGGAGCTTCCTTTTGAAGGAATACTTGATTACCGGAAGATAGCTCTATTTGTT
TCCTCCAGTGATGCTATGCAGCCAGGTTGGCTTTTGACATTTCTGAAAAGTATCAGTCCT
GCTCAAATTAAAGAAATGCAAAGGAACCTAGCCAAGTACTCGAGGCATTTTGTATATTCC
AGTCCAGCTCAACTCTTGGGTCCAGAAGACTTGGTGTGGAGAATGATGGCGGGTAAGTTA
ATGAACATCAAGCTTCACACCAGAAGGTTGCAGCGTGTGGTGAGGGAATCCAGAAGGCTC
TGCACGTGTGACTGCAAGCGTGCCAACTTCACAGGCCCCTAG

Peptide Sequence

PEP ID

VIT_19s0014g00560.t01
PEP Infomation

pep chromosome:12X:19:572717:579014:1 gene:VIT_19s0014g00560 transcript:VIT_19s0014g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGKYVASSSLPNPRGGSTRSPILLLTFSLLSLSLLLFLFSILPSHPNPNPNRNPNLNTL
LPESSFVASLEHFLISKSPRSPPIRDDTVGSDDPEAVKKLDDLVWQREIRRVYEDPYYPA
ASGVTSAIRVYVYEMPAKFTYDLLWLFRNTYKETSNRTSNGSPVHRLIEQHSIDYWLWAD
LTAPESERLLKNVVRVHRQEEADLFYIPFFTTISFFLLEPEQWKPLYREALKWVTDQPAW
KRSEGRDHILPVHHPWSFKTVRKSMKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPN
VDLCDAKCSSESESKRKTLLFFRGRLKRNAGGKIRAKLMAELSGDDGVVIQEGTAGEGGK
EAAQRGMRKSIFCLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFV
SSSDAMQPGWLLTFLKSISPAQIKEMQRNLAKYSRHFVYSSPAQLLGPEDLVWRMMAGKL
MNIKLHTRRLQRVVRESRRLCTCDCKRANFTGP

Transcript Sequence

Transcript ID

VIT_19s0014g00560.t01
Transcript Infomation

cdna chromosome:12X:19:572717:579014:1 gene:VIT_19s0014g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCTCAGCTCTGCAATGGCTTCTCTGTGGAATTCTGGAGAGGAATGAAGAAACCCTCATA
GAGAGAAAAATGGCGGGAAAATACGTGGCATCATCGTCTCTACCAAACCCTAGAGGCGGA
AGCACCAGATCTCCGATCCTCCTTCTCACCTTCTCTCTCCTCTCCCTTTCTCTCCTTCTC
TTTCTCTTCTCCATCCTCCCCTCCCATCCAAACCCCAACCCTAACCGTAACCCTAACCTT
AACACTCTTCTACCTGAATCCAGCTTCGTTGCTTCTCTCGAACACTTCCTCATTTCCAAG
TCCCCCAGATCTCCTCCAATTCGAGATGATACTGTTGGTTCAGATGACCCGGAGGCAGTG
AAGAAGCTCGATGATTTGGTGTGGCAGAGGGAGATTCGGAGGGTGTACGAGGACCCGTAC
TATCCGGCGGCGTCGGGGGTGACGTCGGCCATTAGGGTGTATGTGTACGAGATGCCGGCG
AAGTTTACGTATGATCTCCTCTGGTTGTTTCGGAACACTTATAAGGAGACTTCGAATCGT
ACTTCCAATGGTAGCCCCGTGCATCGCCTGATTGAGCAGCATTCTATTGATTACTGGCTA
TGGGCGGATTTGACTGCACCAGAATCAGAAAGGCTTTTGAAAAATGTTGTCAGAGTGCAT
AGGCAGGAGGAGGCGGACCTATTCTACATTCCATTCTTCACAACCATCAGCTTCTTCTTG
TTGGAGCCAGAGCAGTGGAAGCCACTTTACAGGGAAGCTTTGAAGTGGGTGACTGATCAA
CCTGCATGGAAACGGTCTGAAGGGAGGGACCACATACTTCCAGTTCATCATCCATGGTCT
TTCAAGACTGTTCGGAAATCCATGAAGAATGCAATTTGGCTGTTACCAGACATGGACTCC
ACAGGGAACTGGTACAAGCCTGGACAAGTTTCACTTGAAAAAGATCTAATACTTCCTTAT
GTTCCAAATGTCGATTTGTGTGATGCCAAATGCTCATCGGAAAGTGAATCAAAGAGGAAG
ACACTTCTATTCTTCCGTGGGAGGCTTAAAAGGAATGCTGGGGGGAAGATTCGTGCTAAG
CTTATGGCAGAACTAAGTGGTGATGATGGTGTGGTTATACAGGAGGGAACTGCTGGGGAA
GGGGGGAAAGAAGCTGCCCAGAGAGGGATGCGCAAGTCTATTTTTTGCCTAAGTCCAGCT
GGTGACACTCCATCCTCTGCTAGATTGTTTGACGCTATTGTTAGTGGGTGCATCCCTGTT
ATAGTTAGTGATGAACTGGAGCTTCCTTTTGAAGGAATACTTGATTACCGGAAGATAGCT
CTATTTGTTTCCTCCAGTGATGCTATGCAGCCAGGTTGGCTTTTGACATTTCTGAAAAGT
ATCAGTCCTGCTCAAATTAAAGAAATGCAAAGGAACCTAGCCAAGTACTCGAGGCATTTT
GTATATTCCAGTCCAGCTCAACTCTTGGGTCCAGAAGACTTGGTGTGGAGAATGATGGCG
GGTAAGTTAATGAACATCAAGCTTCACACCAGAAGGTTGCAGCGTGTGGTGAGGGAATCC
AGAAGGCTCTGCACGTGTGACTGCAAGCGTGCCAACTTCACAGGCCCCTAGCTTCCCCTT
CCCCCCATTTATTGCTTATATTTCTTTTGTAAACTTATATATATTTTGTGGGAGTTCAAA
ATTGCTTAAACCAGAAGTTAGTTAGGTACCACATCTCGATATTTTTGTAG