Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0164g00040.t01
CDS Infomation

cds chromosome:12X:18:18227285:18232331:1 gene:VIT_18s0164g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGATGCTCGATTCCTTCTTCAACAAGGGCTTCAAAGGTTCGAAATGTAAAACCCTA
CTGAAACTTACAATCCCTCGCATAAAGTTGTTAAGGAACAGGAGAGAGATTCAGATAAAG
CAAATGCGCCGAGACATTGCTAAGCTTCTTGAGACTGGTCAAGAAGCTACTGCTCGAATC
CGGGTGGAGCATATAATAAGAGAAGAGAATATGATGGCTGCTCAAGAGATCATTGAGCTG
TACTGTGAGCTTATTTCTGTTCGCCTCCCAATCATTGAAACACAAAGGGAATGTCCCTTA
GACCTGAAGGAAGCAATATCGAGTTTGTGTTTTGCTGCACCGAGATGTGCAGATCTACCA
GAGCTGCTGCAGGTTCAAATGCTAATGGCCTCCAAATATGGGAAGGAATTTGTAGCGGCT
GCAACTGAGCTCATGCCAGATTGTGGTGTTTGTCGCCAGTTGATTGAACTGCTTTCTGTC
CGTGCTCCTTCTCCTGATGTGAAACTGAAGCTACTCAAGGAAATTGCTGAAGAGCATGGG
CTAGATTGGGATCCAGCTGCCTCTGAAACTGAGTTTTTCAAGCCACATGAAGACTTGCTG
AATGGCCCAACACAGTTTGTCAGTGGATCTAAATTGCCTCTTCCCAAGGAGAAACATGAT
GAATCATTGCACTCTGCCAGTGAACAAACACCCAAGGAAGAGGATTCTGATTCTGATGCT
GGCTTCTTCGACCCATTAGATTTTCCTGAAGTTCCCAAGGCAACATTACAGCCAAGAGTG
GATGCCGTCTCCCCCCCTGCAATGTTCCCACCTTCTCCATCTGCTCCTCACCATCAAGTT
AATTATGAAGCACTGAGACATTCTGAAGTTAATGAAAACCTATTACGTCAACCACATCCA
CAACCTCAGGAAGCAGCGGAAGAAAGAACAGTGGCTGACCGAAATGAATCGCCTGATGTT
TCAGTCAAAGCTATGGAAGATAAACAGTTTGTGCCATTCATTTCTCGCCCGATATTGGCT
TCTGCATCATTTTCAGCAAGGCAAAATAATCCACCTCCACCTCCCAATCTCTCAAGAACC
AAAACTGAGGCCGATATTGATTTGCAGGATGTATTGGCTGCTGCTCAGGTGGCTGCAGAA
AGTGCTGAGCGGGCTGCTGCAGCAGCCCGCTCAGCAGCTAGCCTTGCACAGGTCAGAATT
GCTGAAATCATGAAGAAAAATGATCAGGTCCTTGATAGTAGCTGTGAGAATCCATTCCAT
ACTGATACATCTGATCAATCACCTACAACAGAAAAGCCACATGTCGATCATCACAACTCT
CTGGGTGATTCTGATGGTGTTTCAAATCCCTTGGATGCTCATCAAGACCCTGAGAATTAC
CAGGCATCAGAGGCATTGAATCTTCCTTCATATGACAGAGACAAGGTGGGTATTGATTCC
TCACCATCCGATGATCATGTGATTGAAGACAAGCCTGCTCATCACCAACCTCAGAGATTG
CCCTCCATGGACGACGACTCATATTTTTCGTACCCAAACTTATTCACCTCACAGGGATCA
AATCTTGGATCTGGTGTTCATTCGTTTACGGATACTTCCCGATCCACTCATGAGCACTGA

Peptide Sequence

PEP ID

VIT_18s0164g00040.t01
PEP Infomation

pep chromosome:12X:18:18227285:18232331:1 gene:VIT_18s0164g00040 transcript:VIT_18s0164g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSMLDSFFNKGFKGSKCKTLLKLTIPRIKLLRNRREIQIKQMRRDIAKLLETGQEATARI
RVEHIIREENMMAAQEIIELYCELISVRLPIIETQRECPLDLKEAISSLCFAAPRCADLP
ELLQVQMLMASKYGKEFVAAATELMPDCGVCRQLIELLSVRAPSPDVKLKLLKEIAEEHG
LDWDPAASETEFFKPHEDLLNGPTQFVSGSKLPLPKEKHDESLHSASEQTPKEEDSDSDA
GFFDPLDFPEVPKATLQPRVDAVSPPAMFPPSPSAPHHQVNYEALRHSEVNENLLRQPHP
QPQEAAEERTVADRNESPDVSVKAMEDKQFVPFISRPILASASFSARQNNPPPPPNLSRT
KTEADIDLQDVLAAAQVAAESAERAAAAARSAASLAQVRIAEIMKKNDQVLDSSCENPFH
TDTSDQSPTTEKPHVDHHNSLGDSDGVSNPLDAHQDPENYQASEALNLPSYDRDKVGIDS
SPSDDHVIEDKPAHHQPQRLPSMDDDSYFSYPNLFTSQGSNLGSGVHSFTDTSRSTHEH

Transcript Sequence

Transcript ID

VIT_18s0164g00040.t01
Transcript Infomation

cdna chromosome:12X:18:18227285:18232331:1 gene:VIT_18s0164g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTTTAAGCGCGTCGCAGGGTTGTGGTCTTGTGGGATTTTGAAATCAGATCGGGATCTG
AATCAGTTGGATTATCATAGTTCCATCATGTCGATGCTCGATTCCTTCTTCAACAAGGGC
TTCAAAGGTTCGAAATGTAAAACCCTACTGAAACTTACAATCCCTCGCATAAAGTTGTTA
AGGAACAGGAGAGAGATTCAGATAAAGCAAATGCGCCGAGACATTGCTAAGCTTCTTGAG
ACTGGTCAAGAAGCTACTGCTCGAATCCGGGTGGAGCATATAATAAGAGAAGAGAATATG
ATGGCTGCTCAAGAGATCATTGAGCTGTACTGTGAGCTTATTTCTGTTCGCCTCCCAATC
ATTGAAACACAAAGGGAATGTCCCTTAGACCTGAAGGAAGCAATATCGAGTTTGTGTTTT
GCTGCACCGAGATGTGCAGATCTACCAGAGCTGCTGCAGGTTCAAATGCTAATGGCCTCC
AAATATGGGAAGGAATTTGTAGCGGCTGCAACTGAGCTCATGCCAGATTGTGGTGTTTGT
CGCCAGTTGATTGAACTGCTTTCTGTCCGTGCTCCTTCTCCTGATGTGAAACTGAAGCTA
CTCAAGGAAATTGCTGAAGAGCATGGGCTAGATTGGGATCCAGCTGCCTCTGAAACTGAG
TTTTTCAAGCCACATGAAGACTTGCTGAATGGCCCAACACAGTTTGTCAGTGGATCTAAA
TTGCCTCTTCCCAAGGAGAAACATGATGAATCATTGCACTCTGCCAGTGAACAAACACCC
AAGGAAGAGGATTCTGATTCTGATGCTGGCTTCTTCGACCCATTAGATTTTCCTGAAGTT
CCCAAGGCAACATTACAGCCAAGAGTGGATGCCGTCTCCCCCCCTGCAATGTTCCCACCT
TCTCCATCTGCTCCTCACCATCAAGTTAATTATGAAGCACTGAGACATTCTGAAGTTAAT
GAAAACCTATTACGTCAACCACATCCACAACCTCAGGAAGCAGCGGAAGAAAGAACAGTG
GCTGACCGAAATGAATCGCCTGATGTTTCAGTCAAAGCTATGGAAGATAAACAGTTTGTG
CCATTCATTTCTCGCCCGATATTGGCTTCTGCATCATTTTCAGCAAGGCAAAATAATCCA
CCTCCACCTCCCAATCTCTCAAGAACCAAAACTGAGGCCGATATTGATTTGCAGGATGTA
TTGGCTGCTGCTCAGGTGGCTGCAGAAAGTGCTGAGCGGGCTGCTGCAGCAGCCCGCTCA
GCAGCTAGCCTTGCACAGGTCAGAATTGCTGAAATCATGAAGAAAAATGATCAGGTCCTT
GATAGTAGCTGTGAGAATCCATTCCATACTGATACATCTGATCAATCACCTACAACAGAA
AAGCCACATGTCGATCATCACAACTCTCTGGGTGATTCTGATGGTGTTTCAAATCCCTTG
GATGCTCATCAAGACCCTGAGAATTACCAGGCATCAGAGGCATTGAATCTTCCTTCATAT
GACAGAGACAAGGTGGGTATTGATTCCTCACCATCCGATGATCATGTGATTGAAGACAAG
CCTGCTCATCACCAACCTCAGAGATTGCCCTCCATGGACGACGACTCATATTTTTCGTAC
CCAAACTTATTCACCTCACAGGGATCAAATCTTGGATCTGGTGTTCATTCGTTTACGGAT
ACTTCCCGATCCACTCATGAGCACTGAATCTGAACAACTTGCCAACAAGATGTTTGCTCA
TCTGTTTTTTAAGCTCTTGCTGGTGAGTGGATTTTATGTTATTAGGCTTGTATGAAGTGC
CTTCATGGTTCTTTCTTTCCTGTAAAGTAGTGCAGCTATCAGACATTTCGGAAGCATAAT
TTGTTTATTATTGGCTTCCTTGGTGGAATGCAGCATAGAGAAAAAAAATACTACCTGTGT
GGTAGGGAAGCCATTCCGGGTTTTTTTTTTTTACATCATTATGTGCTAGTTAACTTGTAG
GAATATTTGTGTAAAAACCTTGATGTTTTGCTGGAAATAAAGGTTACTTTACC