Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0157g00190.t01
CDS Infomation

cds chromosome:12X:18:19023810:19026806:1 gene:VIT_18s0157g00190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGTGAAGAATAATGGGTTGAGTAAAGGTTGTGTTTCTGAAGAATTAAGGAAACTG
CTGATATCATTGGCATCAAGCTGGGGAGATGTTGTCGATGACCCGAAAAAGTTGCGGGTG
ATCCCATTGAAGGGTGCTATGACAAATGAGATTTATCAGATAAATTGGCCTATTGAGGCA
GGCACAAGAAGCGTTCTTGTTCGGGTCTATGGTGAAGGTGTTGAGGTTTTTTTCGATCGG
GACGATGAAATTAGGACTTTTGAGTGCATGTCTGAGCATGGACATGGGCCTCGCCTTCTT
GGGAGGTTTGCAGATGGGCGTGTGGAGGAGTTTATCCATGCAAAGACACTATCAGCTGCT
GATCTTCGCGATCCCGAAATATCTGCTCTGGTAGCTGCTAAGTTGAGAGAGTTCCACAGG
CTTGAAATGCCAGGGCCTAAGAATGTATTCCTATGGGACAGAATGAGAAACTGGGTTGGT
GAGGCCAAAAGATTGTCTTCTCCGAAAGACGCAAAGGAATTCTGCTTGGATACTCTGGAG
GAGGAAATCAGTATGCTGCAGAAGGAGTTTTCACAGGACCACCAAGACATTGGGTTTTGT
CACAATGATTTGCAGTACGGAAACATAATGATTGATGAGAAAACAAGGGCAATCACTATA
ATTGACTATGAATATGCAAGTTACAACCCTGTTGCCTATGACCTAGCAAATCACTTCTGT
GAAATGGTAGCGAATTATCATACAGATACACCTCATATCTTAGACTATAGTAAATACCCA
GACCAGGAGGAGCGCCATAGATTCATCCGCACATACCTCAGCAGTGCAGGTAACCAACCA
AGTGACAGTGAAGTTGAAAAATTAGCCTGTGATGCAGAGAAGTACACTCTTGCAAATCAT
CTATTTTGGGGCATATGGGGAATAATTTCGGGTCATGTAAACACGATTGAATTCAACTAC
ATGGAGTATGCAAGGCAGAGGTTTCAGCAGTACTGGCTCAGAAAGCCCCTGCTTTTGGGT
TCCTCGAAAGCTAGATCTGATAGTGTCATCAATGATTCTTCTATATCTCCCATGTGA

Peptide Sequence

PEP ID

VIT_18s0157g00190.t01
PEP Infomation

pep chromosome:12X:18:19023810:19026806:1 gene:VIT_18s0157g00190 transcript:VIT_18s0157g00190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTVKNNGLSKGCVSEELRKLLISLASSWGDVVDDPKKLRVIPLKGAMTNEIYQINWPIEA
GTRSVLVRVYGEGVEVFFDRDDEIRTFECMSEHGHGPRLLGRFADGRVEEFIHAKTLSAA
DLRDPEISALVAAKLREFHRLEMPGPKNVFLWDRMRNWVGEAKRLSSPKDAKEFCLDTLE
EEISMLQKEFSQDHQDIGFCHNDLQYGNIMIDEKTRAITIIDYEYASYNPVAYDLANHFC
EMVANYHTDTPHILDYSKYPDQEERHRFIRTYLSSAGNQPSDSEVEKLACDAEKYTLANH
LFWGIWGIISGHVNTIEFNYMEYARQRFQQYWLRKPLLLGSSKARSDSVINDSSISPM

Transcript Sequence

Transcript ID

VIT_18s0157g00190.t01
Transcript Infomation

cdna chromosome:12X:18:19023810:19026806:1 gene:VIT_18s0157g00190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGTGAGTCCTTTTCTGTTTCGTTTTCTCTTCCACTTTCGTTTCCTCCGAACAGATTCTT
TTTGGTGAAGCTTTTTCTTGAATATACATACAGAGATAGTGGTATAGAAATATATCTTTG
TGATCATACAAGATGACTGTGAAGAATAATGGGTTGAGTAAAGGTTGTGTTTCTGAAGAA
TTAAGGAAACTGCTGATATCATTGGCATCAAGCTGGGGAGATGTTGTCGATGACCCGAAA
AAGTTGCGGGTGATCCCATTGAAGGGTGCTATGACAAATGAGATTTATCAGATAAATTGG
CCTATTGAGGCAGGCACAAGAAGCGTTCTTGTTCGGGTCTATGGTGAAGGTGTTGAGGTT
TTTTTCGATCGGGACGATGAAATTAGGACTTTTGAGTGCATGTCTGAGCATGGACATGGG
CCTCGCCTTCTTGGGAGGTTTGCAGATGGGCGTGTGGAGGAGTTTATCCATGCAAAGACA
CTATCAGCTGCTGATCTTCGCGATCCCGAAATATCTGCTCTGGTAGCTGCTAAGTTGAGA
GAGTTCCACAGGCTTGAAATGCCAGGGCCTAAGAATGTATTCCTATGGGACAGAATGAGA
AACTGGGTTGGTGAGGCCAAAAGATTGTCTTCTCCGAAAGACGCAAAGGAATTCTGCTTG
GATACTCTGGAGGAGGAAATCAGTATGCTGCAGAAGGAGTTTTCACAGGACCACCAAGAC
ATTGGGTTTTGTCACAATGATTTGCAGTACGGAAACATAATGATTGATGAGAAAACAAGG
GCAATCACTATAATTGACTATGAATATGCAAGTTACAACCCTGTTGCCTATGACCTAGCA
AATCACTTCTGTGAAATGGTAGCGAATTATCATACAGATACACCTCATATCTTAGACTAT
AGTAAATACCCAGACCAGGAGGAGCGCCATAGATTCATCCGCACATACCTCAGCAGTGCA
GGTAACCAACCAAGTGACAGTGAAGTTGAAAAATTAGCCTGTGATGCAGAGAAGTACACT
CTTGCAAATCATCTATTTTGGGGCATATGGGGAATAATTTCGGGTCATGTAAACACGATT
GAATTCAACTACATGGAGTATGCAAGGCAGAGGTTTCAGCAGTACTGGCTCAGAAAGCCC
CTGCTTTTGGGTTCCTCGAAAGCTAGATCTGATAGTGTCATCAATGATTCTTCTATATCT
CCCATGTGAAGTTGTAATTCTTTTCATTGGGACTGGATTGTGTAAATTCATGTAAAATTA
CGTTCAGTGAGGAGTATAGTTAGCAAATATAGATATGCAGAACAAGTCATAGGGT