Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0157g00180.t01
CDS Infomation

cds chromosome:12X:18:18987545:19001784:-1 gene:VIT_18s0157g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCATCCGATGCCGGCAGTGAGCGCGAAGAGCACTCCAACATTTCCGCCTGATGTT
CTGAAGTGTAGTTCTCAAAGGGAGCAAAAGAAGTCGTTTAAAGAAGACAAGCCATTCAGT
TTTTTACATGTTTTCTGGGAGGGTCTTGTAGCTGGAGGTATTGCTGGTGTTGTTGTTGAA
GCAGCTTTATATCCAATTGATACAATAAAAACTAGACTTCAGGCTGCTCATGGTGGAGGA
AAAATTGTATTGAAGGGTCTCTATTCTGGATTGGCAGGAAATCTTGCTGGTGTCTTACCG
GCCTCTGCGATATTTGTTGGTGTATATGAACCTACAAAGCAGAAACTGCTGAAGACCATC
CCTGAAAACCTTAGTGCTTTTGCTCATTTGACTGCAGGTGCTGTTGGCGGGGCTGCATCT
TCTCTTGTTCGTGTGCCAACAGAGGTTGTTAAGCAAAGAATGCAGACTGGGCAATTTGCT
TCTGCAACTGATGCTGTTCAACTTATTGTTGCCAAGGAGGGGTTTAAAGGTCTCTATGCG
GGATATGGATCCTTTTTATTGCGAGATTTACCTTTTGATGCTCTCCAGTTTTGCATCTAT
GAGCAGCTACGGATAGGGTATAAGCTAGCGGCACAGAGGGACTTGAATGATCCTGAGAAT
GCTATGATTGGTGCTTTTTCTGGTGCAATAACAGGAGCTATAACTACTCCTCTTGATGTG
ATAAAGACTAGATTAATGGTTCAGGGATCTGCAAACCAGTACAAAGGGATTTTTGACTGT
GTTAGGACTGTCATAAGAGAAGAAGGAACTCCTGCTCTTTTCAAGGGTATCGGGCCAAGA
GTACTCTGGATAGGTATTGGAGGTTCAATTTTCTTTGTCATTCTTGAAAGGACAAAGCAG
GTGGTTGCCCAAACGCACACTAGGACTGAGAAGAAGACATGGAGTAGATTCCTTCTGAAA
GCCATTTTTTGGGTCCTGTTGTGTTTGGATTACACCTGGAATCAATATGAATATTGA

Peptide Sequence

PEP ID

VIT_18s0157g00180.t01
PEP Infomation

pep chromosome:12X:18:18987545:19001784:-1 gene:VIT_18s0157g00180 transcript:VIT_18s0157g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGHPMPAVSAKSTPTFPPDVLKCSSQREQKKSFKEDKPFSFLHVFWEGLVAGGIAGVVVE
AALYPIDTIKTRLQAAHGGGKIVLKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLKTI
PENLSAFAHLTAGAVGGAASSLVRVPTEVVKQRMQTGQFASATDAVQLIVAKEGFKGLYA
GYGSFLLRDLPFDALQFCIYEQLRIGYKLAAQRDLNDPENAMIGAFSGAITGAITTPLDV
IKTRLMVQGSANQYKGIFDCVRTVIREEGTPALFKGIGPRVLWIGIGGSIFFVILERTKQ
VVAQTHTRTEKKTWSRFLLKAIFWVLLCLDYTWNQYEY

Transcript Sequence

Transcript ID

VIT_18s0157g00180.t01
Transcript Infomation

cdna chromosome:12X:18:18987545:19001784:-1 gene:VIT_18s0157g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAAAGGTTTTAAGCTTCATAATTTGTCTATATTTTCTTTTTCTTCCGTTTCTCCGCAG
CCAAACAGCGCAGCTTGTAGCTCTAAATTGAAGAAAAGGCATTACATTTGTATGGAGCCC
TGAGAATCATTGCACCTCGATGGGTCATCCGATGCCGGCAGTGAGCGCGAAGAGCACTCC
AACATTTCCGCCTGATGTTCTGAAGTGTAGTTCTCAAAGGGAGCAAAAGAAGTCGTTTAA
AGAAGACAAGCCATTCAGTTTTTTACATGTTTTCTGGGAGGGTCTTGTAGCTGGAGGTAT
TGCTGGTGTTGTTGTTGAAGCAGCTTTATATCCAATTGATACAATAAAAACTAGACTTCA
GGCTGCTCATGGTGGAGGAAAAATTGTATTGAAGGGTCTCTATTCTGGATTGGCAGGAAA
TCTTGCTGGTGTCTTACCGGCCTCTGCGATATTTGTTGGTGTATATGAACCTACAAAGCA
GAAACTGCTGAAGACCATCCCTGAAAACCTTAGTGCTTTTGCTCATTTGACTGCAGGTGC
TGTTGGCGGGGCTGCATCTTCTCTTGTTCGTGTGCCAACAGAGGTTGTTAAGCAAAGAAT
GCAGACTGGGCAATTTGCTTCTGCAACTGATGCTGTTCAACTTATTGTTGCCAAGGAGGG
GTTTAAAGGTCTCTATGCGGGATATGGATCCTTTTTATTGCGAGATTTACCTTTTGATGC
TCTCCAGTTTTGCATCTATGAGCAGCTACGGATAGGGTATAAGCTAGCGGCACAGAGGGA
CTTGAATGATCCTGAGAATGCTATGATTGGTGCTTTTTCTGGTGCAATAACAGGAGCTAT
AACTACTCCTCTTGATGTGATAAAGACTAGATTAATGGTTCAGGGATCTGCAAACCAGTA
CAAAGGGATTTTTGACTGTGTTAGGACTGTCATAAGAGAAGAAGGAACTCCTGCTCTTTT
CAAGGGTATCGGGCCAAGAGTACTCTGGATAGGTATTGGAGGTTCAATTTTCTTTGTCAT
TCTTGAAAGGACAAAGCAGGTGGTTGCCCAAACGCACACTAGGACTGAGAAGAAGACATG
GAGTAGATTCCTTCTGAAAGCCATTTTTTGGGTCCTGTTGTGTTTGGATTACACCTGGAA
TCAATATGAATATTGAGAGCTTTGAGTTAGATT