Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g01380.t01
CDS Infomation

cds chromosome:12X:18:961760:967044:1 gene:VIT_18s0122g01380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTCTTCTGCCGGCGCCGCTTCCGACTCGATTCCCTTCGTATCATTTCTTATCTCCG
GTTCTCCGCGACCACCGCATTCTCCAGCCACCACTCCTCGCCACCACCTCTGCTGCCGTC
ACCACCGCTTCTGGAGAAGCCTCTCAGTTCTCCAAGCCACTCAACGAATACGGCAGCAGC
GGCGACCTTAATTCTGTGCCGAACCGCCGCTACGACTTCACTCCACTGCTCCGGTTTCTG
TCCAATTCAGAATCCGACTCTGATTCCGGAGCCGAAGTCGAGTCTCCTCCTCCGACCTCT
CTGGACTTCACTGAGTTCCAGCTAGTGGAGTCTTACCGAGCCGTGCCGGCTCCGCTGTGG
CACTCGCTCCTTAAATCGCTATGCTCAGATTCGTCCTCAATTGGAACTGCGTATTCCCTA
GTTACATGGCTTGAGAGGCACAATCTCTGTTTTTCTTACGAGTTGCTCTACTCGATTCTT
ATTCACGCTCTGGGACGCTCCGAGAAGCTTTACGAAGCGTTCTTGCTTTCTCAGAGACAA
ACCCTAACTCCATTGACATACAATGCCCTAATTGGGGCCTGTGCTCGTAACGATGACCTC
GAAAAAGCCCTAAATTTGATGTCTCGGATGCGCCGTGATGGTTTCCCATCCGATTTCGTG
AATTACAGCTTCATAATTCAGTCGCTGACTCGTACTAACAAGAGTGATTCTTCAATGTTG
CAGAAAATTTATGCGGAGATTGAGTCAGATAAGATTGAGCTTGATGGACAGCTCTTGAAT
GATATAATCGTGGGGTTTGCGAAATCTGGTGATGTGAACCGGGCAATGTCCTTTCTGGCC
ATGGTACAGGGCAATGGGTTGAGCCCAAAAACTGCTACTCTTGTTGCAGTTATAACTGCA
TTGGGGAATGCTGGTAGGACAGAGGAGGCGGAGGCTATTTTTGAGGAGTTAAAAGAAGGT
GGATTGATGCCAAGGACAAGGGCTTATAATGCTCTTCTCAAAGGGTACGTGAAAACAGGT
TCTTTGAAAGATGCTGAATCCATTGTGTCGGAGATGGAGAGGAGTGGGTTTTCCCCAGAT
GAGCACACTTATAGTCTTCTTATTGATGCATATGCAAATGCAGGTAGGTGGGAAAGCGCA
AGAATTGTGTTGAAGGAAATGGAAGCAAGTGGTGTACGGCCTAATTCTTATGTTTTTAGC
AGAATTTTAGCAAGTTATCGTGATAGAGGAAAATGGCAAAAATCATTTCAGGTTCTGAGG
GAGATGAGGAATAGCGGGGTGTCCCCTGATAGGCATTTTTACAATGTGATGATTGATACT
TTTGGCAAGTGTAATTGTCTAGATCACGCACTGGCCACATTTGACCGGATGAGAATGGAG
GGTGTACAGCCTGATGCTGTCACATGGAATACGCTCATAGATTGTCACTGTAAGTCTGGG
CACCACAATAAAGCAGAGGAGTTGTTTGAGGCAATGCAGGAAAGTGGGTGCTCTCCTTGC
ACTACAACATATAATATTATGATTAATTCTTTTGGGGAGCAGGAGAGATGGGAGGATGTG
AAGACCTTGTTGGGGAAGATGCAGAGTCAGGGGTTGTTGGCCAATGTTGTTACATACACC
ACACTGGTTGATATTTATGGACAATCAGGGAGATTTAAGGATGCAATAGAGTGCTTGGAG
GTCATGAAATCTGTTGGGTTGAAGCCATCCTCAACCATGTATAATGCACTAATTAATGCA
TATGCACAAAGGGGTTTGTCTGAGCAAGCAATAAATGCATTTAGGGTCATGAGAGCAGAT
GGTCTAAAGCCCAGTGTGTTGGTTCTCAACTCCTTAATCAATGCATTTGGTGAGGATAGA
AGGGATGCTGAAGCTTTTTCTGTGTTGCAGTACATGAAGGAAAATGACTTGAAGCCAGAT
GTTGTTACATATACTACACTCATGAAAGCTCTAATTCGGGTTGAGAAGTTTGACAAGGTT
CCAGCTGTGTATGAAGAAATGACTCTATCTGGGTGTACTCCAGATAGGAAAGCCAGAGCA
ATGTTGCGGTCTGCTCTCAGATACATGGAGCGAACACTAAAATCATAG

Peptide Sequence

PEP ID

VIT_18s0122g01380.t01
PEP Infomation

pep chromosome:12X:18:961760:967044:1 gene:VIT_18s0122g01380 transcript:VIT_18s0122g01380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLLLPAPLPTRFPSYHFLSPVLRDHRILQPPLLATTSAAVTTASGEASQFSKPLNEYGSS
GDLNSVPNRRYDFTPLLRFLSNSESDSDSGAEVESPPPTSLDFTEFQLVESYRAVPAPLW
HSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQ
TLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSML
QKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITA
LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPD
EHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR
EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG
HHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT
TLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD
GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV
PAVYEEMTLSGCTPDRKARAMLRSALRYMERTLKS

Transcript Sequence

Transcript ID

VIT_18s0122g01380.t01
Transcript Infomation

cdna chromosome:12X:18:961760:967044:1 gene:VIT_18s0122g01380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAACCACCTCTCTCTCTCTCTGTAAACTATCTTCCACTCTCTAAGGAGAATATGCTTCTT
CTGCCGGCGCCGCTTCCGACTCGATTCCCTTCGTATCATTTCTTATCTCCGGTTCTCCGC
GACCACCGCATTCTCCAGCCACCACTCCTCGCCACCACCTCTGCTGCCGTCACCACCGCT
TCTGGAGAAGCCTCTCAGTTCTCCAAGCCACTCAACGAATACGGCAGCAGCGGCGACCTT
AATTCTGTGCCGAACCGCCGCTACGACTTCACTCCACTGCTCCGGTTTCTGTCCAATTCA
GAATCCGACTCTGATTCCGGAGCCGAAGTCGAGTCTCCTCCTCCGACCTCTCTGGACTTC
ACTGAGTTCCAGCTAGTGGAGTCTTACCGAGCCGTGCCGGCTCCGCTGTGGCACTCGCTC
CTTAAATCGCTATGCTCAGATTCGTCCTCAATTGGAACTGCGTATTCCCTAGTTACATGG
CTTGAGAGGCACAATCTCTGTTTTTCTTACGAGTTGCTCTACTCGATTCTTATTCACGCT
CTGGGACGCTCCGAGAAGCTTTACGAAGCGTTCTTGCTTTCTCAGAGACAAACCCTAACT
CCATTGACATACAATGCCCTAATTGGGGCCTGTGCTCGTAACGATGACCTCGAAAAAGCC
CTAAATTTGATGTCTCGGATGCGCCGTGATGGTTTCCCATCCGATTTCGTGAATTACAGC
TTCATAATTCAGTCGCTGACTCGTACTAACAAGAGTGATTCTTCAATGTTGCAGAAAATT
TATGCGGAGATTGAGTCAGATAAGATTGAGCTTGATGGACAGCTCTTGAATGATATAATC
GTGGGGTTTGCGAAATCTGGTGATGTGAACCGGGCAATGTCCTTTCTGGCCATGGTACAG
GGCAATGGGTTGAGCCCAAAAACTGCTACTCTTGTTGCAGTTATAACTGCATTGGGGAAT
GCTGGTAGGACAGAGGAGGCGGAGGCTATTTTTGAGGAGTTAAAAGAAGGTGGATTGATG
CCAAGGACAAGGGCTTATAATGCTCTTCTCAAAGGGTACGTGAAAACAGGTTCTTTGAAA
GATGCTGAATCCATTGTGTCGGAGATGGAGAGGAGTGGGTTTTCCCCAGATGAGCACACT
TATAGTCTTCTTATTGATGCATATGCAAATGCAGGTAGGTGGGAAAGCGCAAGAATTGTG
TTGAAGGAAATGGAAGCAAGTGGTGTACGGCCTAATTCTTATGTTTTTAGCAGAATTTTA
GCAAGTTATCGTGATAGAGGAAAATGGCAAAAATCATTTCAGGTTCTGAGGGAGATGAGG
AATAGCGGGGTGTCCCCTGATAGGCATTTTTACAATGTGATGATTGATACTTTTGGCAAG
TGTAATTGTCTAGATCACGCACTGGCCACATTTGACCGGATGAGAATGGAGGGTGTACAG
CCTGATGCTGTCACATGGAATACGCTCATAGATTGTCACTGTAAGTCTGGGCACCACAAT
AAAGCAGAGGAGTTGTTTGAGGCAATGCAGGAAAGTGGGTGCTCTCCTTGCACTACAACA
TATAATATTATGATTAATTCTTTTGGGGAGCAGGAGAGATGGGAGGATGTGAAGACCTTG
TTGGGGAAGATGCAGAGTCAGGGGTTGTTGGCCAATGTTGTTACATACACCACACTGGTT
GATATTTATGGACAATCAGGGAGATTTAAGGATGCAATAGAGTGCTTGGAGGTCATGAAA
TCTGTTGGGTTGAAGCCATCCTCAACCATGTATAATGCACTAATTAATGCATATGCACAA
AGGGGTTTGTCTGAGCAAGCAATAAATGCATTTAGGGTCATGAGAGCAGATGGTCTAAAG
CCCAGTGTGTTGGTTCTCAACTCCTTAATCAATGCATTTGGTGAGGATAGAAGGGATGCT
GAAGCTTTTTCTGTGTTGCAGTACATGAAGGAAAATGACTTGAAGCCAGATGTTGTTACA
TATACTACACTCATGAAAGCTCTAATTCGGGTTGAGAAGTTTGACAAGGTTCCAGCTGTG
TATGAAGAAATGACTCTATCTGGGTGTACTCCAGATAGGAAAGCCAGAGCAATGTTGCGG
TCTGCTCTCAGATACATGGAGCGAACACTAAAATCATAGTTGACAAGCAGAGTCAAGTCA
TCCAATCAAAGCAAACCCCAGGACTAAAATTAAATGCCATGTTTGGTCTAGTCAATGGTG
GTCCATTTGAGGAGTTGTTGTTGTAACTGAAGAAAGAAAAATTCAATTCCAAGATCAACT
ATGTTCAGAATTCTGGAAACAGCGCAAGAAAATACCGGAAAACACATGGAAGGATTTGAA
GATTGAAGAACCAAACACCAAACCCCATCTCAATTTAGTATGTAATATAATTTTCCCACA
TGCACCAAAGGAAATAGACACAATGCAGCTCAGGTGAATGCCTGTGTCTTCTATCATATT
TGCATCAATCTCAATCATTACTGGATCATGTTGTGGAACATCGACCATGCACTCATATTC
ATTAATTTTATTTCTTGGGTTGTTTTGTAATGGAGAGAATATCAGAAAGGCCGGTGGGCT
TGGACCTCTGCTGGACGACTCATACACATGAATAATATAATTTATTCATTGTT