Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g01220.t01
CDS Infomation

cds chromosome:12X:18:821344:827604:1 gene:VIT_18s0122g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAAAGTAGCGGAGATGAAGAAGAAGAAGAAAGGACGCCCCTCTCTCTTAGATCTC
CAAAAACGCAGTCTCATAGAACAAGAGCAACAGCCACAAAACCCTAACTTGAAAAACCCT
AATTTTCCTAATCCAAATCCTAACTCAACACGTCGATCCACTCGCCGGAGCGCCAAAGTC
GACGAAATTTTGCCGGCGCCAGACTGGATTGAAGGCGTCGGAGACGACGATGACGAGCGC
AAAGAGAAGAAGCTTAAGCTCCTTCGCCGCTTGTCTCCGAATCATACGCAAAATCCTGGA
TCTTTGCCGAATTCCGTGTCTTTGCACTCGGTTTCGTACGCTTCAAATTCGAATGCGGAT
GTTGAGAATCCCGAGGCGTCTCTCAAGAAGCGGAAGATCAATGCCGTTGGTGACGGATCT
GGCCACACCACTGCCGAAAAGGAAGAAAAGGTTGCGAAAGCGACTGATACTCCACAAGGG
TCGAGGTTGGAATCCGGCCCCACGACACCTTTGCCAGACAAAAAGTTGTTGGTGTTCATT
CTTGATAGACTTCAAAAAAAAGACACCCATGGTGTGTTCTTGGAGCCAGTGGATCCGGAA
GAGCTTCCCGATTACCATGACATCATAGAGCATCCCATGGATTTTGGAACTGTGAGGAAG
AAACTAGATGGGGGACTTTATTCCAACTTGGAACAATTTGAGAGCGATATTTTCTTAATA
TGTTCGAATGCAATGCAGTATAATGCACCAGATACTGTGTACTTTCGACAGGCACGAACG
ATACAAGAACTAGCAAAGAGGGACTTTGCAAATTTGAGGCAAGAAGGTGATGATGGCGAG
CCACAACCCAAAATTGTCAGGAGAGGCAGGCCACCAACCAAGCACCTGAAGAAATCTCTT
GGAAGTTCTCCCTTAGAGCATGTTGCACCTGAGACATCCTCTGAAGCGACTCTTGCTACT
GGGGGAGATAATTCCATCTCATCTAACTCCTACAATCTAAGGAAAGGACCTACTCCATGC
AAGTTTCGACCGGCAGACATATCAGTGAAGGCCCAATATGGGTCCCGCAACAGTGACAAT
TATTCTAGCTGGTTGTCTGAATGGAATAATGAATTTCCAGCTTCCATTTTGAAGGGAGTT
TCCACGAAGCATGGCAAGAAACCTTTTGAATTAGATGAAAATAGGCGTGATACCTATAAG
CATCCATTGGCTTCCAACCATGAGCCATCAGTGTTGACTACCCTCCATGGAGAATTGAAG
CAACTGATGTCGGTAGGTCTACACTCGGACCATGGTTATGCAAGAAGCCTCGCTCGATTT
GCTGCAGATCTTGGGCAAGATGTTTGGAAAATTGCTGCCAAGAAAATTGCCAATGTTTTG
CCTGTTGGAGTTGAGTTTGGTCCTGGATGGGTGGGAGAAAATGAGGCATTAGCACAGCGG
CCATCTCTGTTGTGTGAGAATCAGAAATCTTCAAACAACTCAACACCACCACATCCACAG
CCCCCACCTACTACTTCTGGTTCAAGTCTGTTTGTTGCAAACAGATCATCTCTCCCTTGT
AAAGAAGAGTCAGGGGAAGCTGTCAGAGGATTAAATTCCCAAATCGAGTTAACTTCAAGA
CCTGCTCCTCCTGAAATTCACCAAACGCTTGGAATTCACCCTGGTTTGAATGGTTTCAGT
GGTGGGTTTGGGTTCAATCCTTCATCCCAAATGGGAATGGCCAGACTGGCCATGCTAGCA
GGGAATTCCAGTACTGAATCAATGCCATCTCAAAAGCTTGGCATGGGATTACCACAACGG
ATTCCACCCGACCTCAATGTCAGATTCCAGGCACCAGGCTCACCCAGCTCCAGCACCACG
CCCATTGCTTCATCACAACAGCCAGATTTAGCCTTGCAGCTGTGA

Peptide Sequence

PEP ID

VIT_18s0122g01220.t01
PEP Infomation

pep chromosome:12X:18:821344:827604:1 gene:VIT_18s0122g01220 transcript:VIT_18s0122g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKVAEMKKKKKGRPSLLDLQKRSLIEQEQQPQNPNLKNPNFPNPNPNSTRRSTRRSAKV
DEILPAPDWIEGVGDDDDERKEKKLKLLRRLSPNHTQNPGSLPNSVSLHSVSYASNSNAD
VENPEASLKKRKINAVGDGSGHTTAEKEEKVAKATDTPQGSRLESGPTTPLPDKKLLVFI
LDRLQKKDTHGVFLEPVDPEELPDYHDIIEHPMDFGTVRKKLDGGLYSNLEQFESDIFLI
CSNAMQYNAPDTVYFRQARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSL
GSSPLEHVAPETSSEATLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDN
YSSWLSEWNNEFPASILKGVSTKHGKKPFELDENRRDTYKHPLASNHEPSVLTTLHGELK
QLMSVGLHSDHGYARSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQR
PSLLCENQKSSNNSTPPHPQPPPTTSGSSLFVANRSSLPCKEESGEAVRGLNSQIELTSR
PAPPEIHQTLGIHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSSTESMPSQKLGMGLPQR
IPPDLNVRFQAPGSPSSSTTPIASSQQPDLALQL

Transcript Sequence

Transcript ID

VIT_18s0122g01220.t01
Transcript Infomation

cdna chromosome:12X:18:821344:827604:1 gene:VIT_18s0122g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGGGAAGAAGGAAGACGAGAAATATCGGACAACCAGGGAGTAACCGAGTACTTGAGTC
CAGTCCAAACCTTTTGGGCTTTTGAATTAGACTAAACGTAGCATAATCAAGCCCGGGCCA
ATTTAAACAAGCCCAGATTTTCATTTACTCTCCCACGCGTTTTCTCAACAGCCAAACAAA
AGTCAGATTACCGACGATGGCGTAAGCATCCAAACTTGGTCACGTGTCACACCCACCCAA
TCCACGTGACCCTTTGGTACGTGCGAACCACATGTGAAACCCAATCCCAAAATTAATAAA
AAAATAAAAATAATTAGCCCCTGTTTGGAGAGAAAGAAAGAGGAGTCAGAATGGGAAAAG
TAGCGGAGATGAAGAAGAAGAAGAAAGGACGCCCCTCTCTCTTAGATCTCCAAAAACGCA
GTCTCATAGAACAAGAGCAACAGCCACAAAACCCTAACTTGAAAAACCCTAATTTTCCTA
ATCCAAATCCTAACTCAACACGTCGATCCACTCGCCGGAGCGCCAAAGTCGACGAAATTT
TGCCGGCGCCAGACTGGATTGAAGGCGTCGGAGACGACGATGACGAGCGCAAAGAGAAGA
AGCTTAAGCTCCTTCGCCGCTTGTCTCCGAATCATACGCAAAATCCTGGATCTTTGCCGA
ATTCCGTGTCTTTGCACTCGGTTTCGTACGCTTCAAATTCGAATGCGGATGTTGAGAATC
CCGAGGCGTCTCTCAAGAAGCGGAAGATCAATGCCGTTGGTGACGGATCTGGCCACACCA
CTGCCGAAAAGGAAGAAAAGGTTGCGAAAGCGACTGATACTCCACAAGGGTCGAGGTTGG
AATCCGGCCCCACGACACCTTTGCCAGACAAAAAGTTGTTGGTGTTCATTCTTGATAGAC
TTCAAAAAAAAGACACCCATGGTGTGTTCTTGGAGCCAGTGGATCCGGAAGAGCTTCCCG
ATTACCATGACATCATAGAGCATCCCATGGATTTTGGAACTGTGAGGAAGAAACTAGATG
GGGGACTTTATTCCAACTTGGAACAATTTGAGAGCGATATTTTCTTAATATGTTCGAATG
CAATGCAGTATAATGCACCAGATACTGTGTACTTTCGACAGGCACGAACGATACAAGAAC
TAGCAAAGAGGGACTTTGCAAATTTGAGGCAAGAAGGTGATGATGGCGAGCCACAACCCA
AAATTGTCAGGAGAGGCAGGCCACCAACCAAGCACCTGAAGAAATCTCTTGGAAGTTCTC
CCTTAGAGCATGTTGCACCTGAGACATCCTCTGAAGCGACTCTTGCTACTGGGGGAGATA
ATTCCATCTCATCTAACTCCTACAATCTAAGGAAAGGACCTACTCCATGCAAGTTTCGAC
CGGCAGACATATCAGTGAAGGCCCAATATGGGTCCCGCAACAGTGACAATTATTCTAGCT
GGTTGTCTGAATGGAATAATGAATTTCCAGCTTCCATTTTGAAGGGAGTTTCCACGAAGC
ATGGCAAGAAACCTTTTGAATTAGATGAAAATAGGCGTGATACCTATAAGCATCCATTGG
CTTCCAACCATGAGCCATCAGTGTTGACTACCCTCCATGGAGAATTGAAGCAACTGATGT
CGGTAGGTCTACACTCGGACCATGGTTATGCAAGAAGCCTCGCTCGATTTGCTGCAGATC
TTGGGCAAGATGTTTGGAAAATTGCTGCCAAGAAAATTGCCAATGTTTTGCCTGTTGGAG
TTGAGTTTGGTCCTGGATGGGTGGGAGAAAATGAGGCATTAGCACAGCGGCCATCTCTGT
TGTGTGAGAATCAGAAATCTTCAAACAACTCAACACCACCACATCCACAGCCCCCACCTA
CTACTTCTGGTTCAAGTCTGTTTGTTGCAAACAGATCATCTCTCCCTTGTAAAGAAGAGT
CAGGGGAAGCTGTCAGAGGATTAAATTCCCAAATCGAGTTAACTTCAAGACCTGCTCCTC
CTGAAATTCACCAAACGCTTGGAATTCACCCTGGTTTGAATGGTTTCAGTGGTGGGTTTG
GGTTCAATCCTTCATCCCAAATGGGAATGGCCAGACTGGCCATGCTAGCAGGGAATTCCA
GTACTGAATCAATGCCATCTCAAAAGCTTGGCATGGGATTACCACAACGGATTCCACCCG
ACCTCAATGTCAGATTCCAGGCACCAGGCTCACCCAGCTCCAGCACCACGCCCATTGCTT
CATCACAACAGCCAGATTTAGCCTTGCAGCTGTGACGATGGAATGGTCATTTTTCTAGTT
TTCTGATTCAATGGAAGGGTTTTGCAGCCCCTTGGGATAAGAACAACAATAAGCCCAGTG
ATCTCTAAGCTTTGAGCAGTGCCTTGCCCATCAAGGGTTTTGGGAAAGGAAGGCAATGGA
AGGGAAGGGAAGGTTTTGTACAGAGACTATTAACGTATTCAAATTTTTTTGGTTAGAAGT
TAAAAACCAAGAAAAATCTATATTTGTAACACTTGCATCCCTGATTTAGTGAAGATAATT
TTAACTCCTTCCCATTGGGAAATGAACACAGAAGAAAAAAGAATAATTTTAATATCGTTT
AGTGTGGTGTAGCCCCTTTTTATCTTATTTTCTAACCAGTCTAGCTTACACATGACTGAT
CATCATATAATCCAACAGAAGGAAATGAGACGATTTTAACCCACAAGTTTCTATGAGGAG
ATATTTAGGTTTATCCAAATCCCTTTTAATCATGATCGCTATACAAAATAACAAAATCGA
AACCATTTGGCATCTCTCTTGTGGGGGATGGCATTTGTCAGTGAGTAGAAGTTAAAAGGT
CGTATTCGTCATCTCATCTCAAAAAAACATAAAATAAAAAA