Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g01200.t01
CDS Infomation

cds chromosome:12X:18:813532:815605:1 gene:VIT_18s0122g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCGTTTGTTCTCATCGTTGAGTATATGTACGGTGCCAGGGACCCGAATTTATTGG
GATAAACGGTATGTGAAAGCACAATTCGTTGTGGAGTTTTCAAACAAGAACGAGATAAAG
TTGGGGGTGCAATGTAATGCTAGGGTTAACCATAGAAAACCAACCAAGAACCTTCCGCAT
CCACGGCGCGCTAAGCTCCCTCCGGAGCCTGAAATTAGCACATTTTTGAAGGGGGGAAAT
AGCGGGACAGAGCAATCTGAAATGGGTACGGTTTTGGATAAAGAACCTGATGCGAATGAT
GATGGGTTTCTGGTTGATGGTATTGAAGGAAGAAAAGAGGGGGAGATAGTTTGGGATTCG
GATGAGATTGAAGCAATTTCGTCTCTTTTTATGGGGAGAATCCCTCAAAAGCCTGGGAAA
TTGAATAGGGAAAGGCCTCTTCCACTCCCACTTCCCTACAAACTTCGACCTATGGGACTT
CCCACAACGAAGAGACATGTGAGAGCTGCTTCTTCAATGCCATATGCTTCCCGGGCATCC
CTATCTAAGCAAGTTTACAAGAACCCAGATTTCCTCATTAGCATAGCCAGAGAGATAAGA
AAGCTTCCTTTGGAAGATGACGTTTCTCCAGTTCTTAACAAGTGGGTTAGGTTTCTGCGG
AAGGGCTCATTGTCATTGACAATCCGGGAATTGGGTCACATGGGTCTTCCTGAGAGAGCT
CTACAGACCTTCTTCTGGGCTCAGAAACAACCCCAGCTCTTCCCAGATGATCGCATTTTG
GCCTCAACAGTTGAGGTCCTGGCAAGGACTCACAAGTTGAAAGTTCCATTCAGTTTGGAA
AAGTTCACCGGTTTGGCTAGCCGGAGTGTAATTGAGGCACTGGCAAGGGGATTCATCAGA
AGGGGAAGTTTGAGCCTTGCATGGAAGCTTCTCTTAGTTGCCAAGGATAGTAAAAGGATG
TTGGGACCCAGCATTTATGCAAAGCTAATATTTGAGCTTGGAAAGAACCCCGATAAGCAC
AGCCTTGTACAGGCATTACTAGATGAGCTTGGAGAAAGAGAAGATTTGAAATTAAGCCAT
CAGGATTGCACAGCAGTCATGAAAGTCTGCATAAGGCTTGGGAAATTCGAAATAGTGGAA
AGTCTTTTTAACTGGTATAAACAATCCGAGAATAGTCCAAGTGTGGTTATGTACACAACT
CTAATTCATAGTCGCTATACTGAGAAGAAATACAGGGAGGCACTGGCTGTCGTTTGGGAA
ATGGAGGCTTCAGACTGTGTCTTTGATCTTCCAGCTTATCGTGTGGTGATAAAGCTTTTT
ATTGCTCTGAATGATCTATCAAGAACTGGAAGGTATTTTTCGAAACTTAAGGAAGCAGGT
TTCTCTCCGACATATGATATATACCGGGACATGTTAAAGATTTACATGGTTTTCCGGAGG
CTGGCAAAGTGTAGGGAGGTCTGCAAGGAGTTAGAGATGTCAGGGTTCAAGTTGGATAAG
GGAACCTTGTCACAGTTGTTGCAACTTGAAAAAGAAAACAGGTAA

Peptide Sequence

PEP ID

VIT_18s0122g01200.t01
PEP Infomation

pep chromosome:12X:18:813532:815605:1 gene:VIT_18s0122g01200 transcript:VIT_18s0122g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERLFSSLSICTVPGTRIYWDKRYVKAQFVVEFSNKNEIKLGVQCNARVNHRKPTKNLPH
PRRAKLPPEPEISTFLKGGNSGTEQSEMGTVLDKEPDANDDGFLVDGIEGRKEGEIVWDS
DEIEAISSLFMGRIPQKPGKLNRERPLPLPLPYKLRPMGLPTTKRHVRAASSMPYASRAS
LSKQVYKNPDFLISIAREIRKLPLEDDVSPVLNKWVRFLRKGSLSLTIRELGHMGLPERA
LQTFFWAQKQPQLFPDDRILASTVEVLARTHKLKVPFSLEKFTGLASRSVIEALARGFIR
RGSLSLAWKLLLVAKDSKRMLGPSIYAKLIFELGKNPDKHSLVQALLDELGEREDLKLSH
QDCTAVMKVCIRLGKFEIVESLFNWYKQSENSPSVVMYTTLIHSRYTEKKYREALAVVWE
MEASDCVFDLPAYRVVIKLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRR
LAKCREVCKELEMSGFKLDKGTLSQLLQLEKENR

Transcript Sequence

Transcript ID

VIT_18s0122g01200.t01
Transcript Infomation

cdna chromosome:12X:18:813532:815605:1 gene:VIT_18s0122g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGTGTAAAATTCCTTTGCGGGAAAAAGCAAGCATCTTCCAGATAGAAAAGTTGACCATT
TCCAGCCGTTTGTGTAAGAATCCATCGTGGATGCAATTCTGAGTAAGATGAGGTGTTTGA
TGAAATTCCTGTGAGGCAATGGAGCGTTTGTTCTCATCGTTGAGTATATGTACGGTGCCA
GGGACCCGAATTTATTGGGATAAACGGTATGTGAAAGCACAATTCGTTGTGGAGTTTTCA
AACAAGAACGAGATAAAGTTGGGGGTGCAATGTAATGCTAGGGTTAACCATAGAAAACCA
ACCAAGAACCTTCCGCATCCACGGCGCGCTAAGCTCCCTCCGGAGCCTGAAATTAGCACA
TTTTTGAAGGGGGGAAATAGCGGGACAGAGCAATCTGAAATGGGTACGGTTTTGGATAAA
GAACCTGATGCGAATGATGATGGGTTTCTGGTTGATGGTATTGAAGGAAGAAAAGAGGGG
GAGATAGTTTGGGATTCGGATGAGATTGAAGCAATTTCGTCTCTTTTTATGGGGAGAATC
CCTCAAAAGCCTGGGAAATTGAATAGGGAAAGGCCTCTTCCACTCCCACTTCCCTACAAA
CTTCGACCTATGGGACTTCCCACAACGAAGAGACATGTGAGAGCTGCTTCTTCAATGCCA
TATGCTTCCCGGGCATCCCTATCTAAGCAAGTTTACAAGAACCCAGATTTCCTCATTAGC
ATAGCCAGAGAGATAAGAAAGCTTCCTTTGGAAGATGACGTTTCTCCAGTTCTTAACAAG
TGGGTTAGGTTTCTGCGGAAGGGCTCATTGTCATTGACAATCCGGGAATTGGGTCACATG
GGTCTTCCTGAGAGAGCTCTACAGACCTTCTTCTGGGCTCAGAAACAACCCCAGCTCTTC
CCAGATGATCGCATTTTGGCCTCAACAGTTGAGGTCCTGGCAAGGACTCACAAGTTGAAA
GTTCCATTCAGTTTGGAAAAGTTCACCGGTTTGGCTAGCCGGAGTGTAATTGAGGCACTG
GCAAGGGGATTCATCAGAAGGGGAAGTTTGAGCCTTGCATGGAAGCTTCTCTTAGTTGCC
AAGGATAGTAAAAGGATGTTGGGACCCAGCATTTATGCAAAGCTAATATTTGAGCTTGGA
AAGAACCCCGATAAGCACAGCCTTGTACAGGCATTACTAGATGAGCTTGGAGAAAGAGAA
GATTTGAAATTAAGCCATCAGGATTGCACAGCAGTCATGAAAGTCTGCATAAGGCTTGGG
AAATTCGAAATAGTGGAAAGTCTTTTTAACTGGTATAAACAATCCGAGAATAGTCCAAGT
GTGGTTATGTACACAACTCTAATTCATAGTCGCTATACTGAGAAGAAATACAGGGAGGCA
CTGGCTGTCGTTTGGGAAATGGAGGCTTCAGACTGTGTCTTTGATCTTCCAGCTTATCGT
GTGGTGATAAAGCTTTTTATTGCTCTGAATGATCTATCAAGAACTGGAAGGTATTTTTCG
AAACTTAAGGAAGCAGGTTTCTCTCCGACATATGATATATACCGGGACATGTTAAAGATT
TACATGGTTTTCCGGAGGCTGGCAAAGTGTAGGGAGGTCTGCAAGGAGTTAGAGATGTCA
GGGTTCAAGTTGGATAAGGGAACCTTGTCACAGTTGTTGCAACTTGAAAAAGAAAACAGG
TAA