Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0122g01040.t01
CDS Infomation	cds chromosome:12X:18:731749:735233:-1 gene:VIT_18s0122g01040 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6I6U1]
Sequence	ATGGCTGGAAGCTGGGATGGGAGTTATGACCCTGGTAGCCAGTCAGATGAGAGCCATCAT TTTGAGAGGTCACATTTAGAGCCTATCTATGATTCTTTCGTTTGCCCTCTAACAAAGCAA GTTATGCGTGATCCTATTACCTTAGAAAATGGGCAAACTTTTGAGCGAGAAGCAATCGAG AAGTGGTTCAAGGAATGCAAAGAGAGTGGAAGGAAGCTGGTTTGCCCCTTAACATTAAAA GAGTTAAGAAGCACAGATCTGAATCCTAGTATAGCTTTGCGGCACACCATTGAGGAATGG ACTGCTAGAAATGAAGCTGTTCAACTTGATATGGCTCGTAGATCATTATCTCTGGGCAGC CAGGAAGTTGACATTCTGCTTGCTTTGAAGAATGTGCAGTACCTGTGCCTGAAAAGTCGA TCAAATAAGCATATTGTGCGGAATGCAGATCTGATTCCCATGATTGTTGACATGTTGAAA AGCGGCAGCCGCAGGGTTCGGTGTAGAGCTTTAGAAACACTTCGAATCGTGGCTGAAGAA GACGCTGAGAATAAGGAAATAATGGCCGAGGGGGACACTATACGCACAATAGTTAAATTT TTGTCTCATGAGCTTTCCAAAGAGAGGGAGGAAGCTGTCTCTTTGTTGTATGAGCTTTCC AAATCTGAAACTTTGTGTGAAAAGATTGGCTCACTCAATGGAGCAATTCTTATATTAGTT GGAATGACAAGCAGCAAATCAGAAAATTTATTGACTGTTGAGAAGGCTGATAAAACACTG GAGAATCTTGAGATGTGTGAGAATAATATACGGCAGATGGCTGAAAATGGTCGACTGCAT CCACTTCTTACTCAAATCCTTGAAGGTCCTCCAGAAACTAAATTGTCCATGGCTACTTAC CTTGGTGAGCTGGTTCTGAACAATGATATGCAAGTCTTTGTGGCTAGAACTGTGGGCTTA GCGCTAATAAATATGATGAAAAGTGGCAACCTGCAATTGAGAGAAGCTGCTTTAAAAGCT TTAAACCAGATTTCATCTTTTGATGCCAGTGCCAGGGTGTTGATAGAGGAAGGAATTCTC CCCCCTCTCATCAAGGACCTCTTAACTGTTGGGACCAACCAACTTCCCATGCGACTCAAA GAGGTCTCTGCAACAATTCTTGCTAATGTTGTGCAGTCGGGCTATGATTTTGATTCCATC CCTGTTGGATCTGATCACCAGACTCTGGTCTCAGAAGACATAGTCCACAACCTACTCCAT CTCATTAGCAACACTGGCCCGGCAATTGAGTGCAAGCTTCTTCAGGTTCTTGTTGGACTC ACCAATTCTCCCACTGCAGTCCTGGATGTTGTTGCAGCCATTAAAAGCTCTGGCGCTACC ATCAGTTTGGTTCAGTTTATTGAGGCCCCACAGAAGGAGTTGCGTCTGGCTTCCATAAAG CTTCTCCAGAATCTCTCTCCACACATGGGCCAGGAACTAGCTGATGCCCTGCGTGGCACA GCCGGCCAGCTTGGCAGCTTAATCAGAGTCATATCTGAAAATATTGGAATCACAGAAGAA CAGGCAGTAGCTGCTGGGCTTTTAGCTGATCTCCCAGAGAGGGATTTGGGACTCACACGA CAGATGTTAGATGAAGGTGCCTTTCAGATGGTCTTCTCTCGAGTTGTCAGGATCCGGCAG GGGGAAACTAGGGGCAACCGCTTCATGACTCCATATCTAGAAGGGCTTGTTCGCGTTCTT GCAAGGGTTACATTTGTGTTGGCTGACGAACCTGATGCCATTGCACTTTGCCGTGAGTAC AATCTTGCTGCTGTCTTCACTGAACTGCTCCAGTCTAATGGCCTTGACAAGGTACAGATG GTTTCTGCCATGTCCCTAGAGAACCTATCACAAGAATCCAAAAACTTGACAAAGTTGCCT GAGTTGCCAGCACCTGGGTTTTGTGCCTCAATCTTTCCTTGTTTGAGCAAGCAGCCTGTC ATAACTGGATTGTGTCGTCTCCACCGTGGCACGTGCTCGCTAAAAGATAGTTTTTGCCTT TTGGAAGGACAGGCCGTGGAGAAGTTGGTCGCTCTTTTAGACCACCAAAATGAGCAGGTT GTTGAAGCAGCACTGGCAGCAATATCAACTTTGTTGGATGATGGGGTAGATATTGAACAA GGGGTGAACATATTGTGTGAAGCAGAGGGAATCAAACCTATACTTGATGTATTACTTGAG AAACGGACAGAGAACCTGAGGAGGAGAGCCGTTTGGGCTGTTGAGAGAATTTTGAGGACT GATGAAATAGCTTATGAAATTTCTGGAGATCCAAATGTGAGCACAGCCCTCGTTGACGCC TTCCAGCATGCTGACTATCGGACCCGGCAGATTGCCGAGCGTGCCCTGAAACACGTGGAC AAGATACCAAACTTCTCAGGCATCTTTCCAAACATAGGATAG

Peptide Sequence

PEP ID	VIT_18s0122g01040.t01
PEP Infomation	pep chromosome:12X:18:731749:735233:-1 gene:VIT_18s0122g01040 transcript:VIT_18s0122g01040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6I6U1]
Sequence	MAGSWDGSYDPGSQSDESHHFERSHLEPIYDSFVCPLTKQVMRDPITLENGQTFEREAIE KWFKECKESGRKLVCPLTLKELRSTDLNPSIALRHTIEEWTARNEAVQLDMARRSLSLGS QEVDILLALKNVQYLCLKSRSNKHIVRNADLIPMIVDMLKSGSRRVRCRALETLRIVAEE DAENKEIMAEGDTIRTIVKFLSHELSKEREEAVSLLYELSKSETLCEKIGSLNGAILILV GMTSSKSENLLTVEKADKTLENLEMCENNIRQMAENGRLHPLLTQILEGPPETKLSMATY LGELVLNNDMQVFVARTVGLALINMMKSGNLQLREAALKALNQISSFDASARVLIEEGIL PPLIKDLLTVGTNQLPMRLKEVSATILANVVQSGYDFDSIPVGSDHQTLVSEDIVHNLLH LISNTGPAIECKLLQVLVGLTNSPTAVLDVVAAIKSSGATISLVQFIEAPQKELRLASIK LLQNLSPHMGQELADALRGTAGQLGSLIRVISENIGITEEQAVAAGLLADLPERDLGLTR QMLDEGAFQMVFSRVVRIRQGETRGNRFMTPYLEGLVRVLARVTFVLADEPDAIALCREY NLAAVFTELLQSNGLDKVQMVSAMSLENLSQESKNLTKLPELPAPGFCASIFPCLSKQPV ITGLCRLHRGTCSLKDSFCLLEGQAVEKLVALLDHQNEQVVEAALAAISTLLDDGVDIEQ GVNILCEAEGIKPILDVLLEKRTENLRRRAVWAVERILRTDEIAYEISGDPNVSTALVDA FQHADYRTRQIAERALKHVDKIPNFSGIFPNIG

Transcript Sequence

Transcript ID	VIT_18s0122g01040.t01
Transcript Infomation	cdna chromosome:12X:18:731749:735233:-1 gene:VIT_18s0122g01040 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6I6U1]
Sequence	ATGGCTGGAAGCTGGGATGGGAGTTATGACCCTGGTAGCCAGTCAGATGAGAGCCATCAT TTTGAGAGGTCACATTTAGAGCCTATCTATGATTCTTTCGTTTGCCCTCTAACAAAGCAA GTTATGCGTGATCCTATTACCTTAGAAAATGGGCAAACTTTTGAGCGAGAAGCAATCGAG AAGTGGTTCAAGGAATGCAAAGAGAGTGGAAGGAAGCTGGTTTGCCCCTTAACATTAAAA GAGTTAAGAAGCACAGATCTGAATCCTAGTATAGCTTTGCGGCACACCATTGAGGAATGG ACTGCTAGAAATGAAGCTGTTCAACTTGATATGGCTCGTAGATCATTATCTCTGGGCAGC CAGGAAGTTGACATTCTGCTTGCTTTGAAGAATGTGCAGTACCTGTGCCTGAAAAGTCGA TCAAATAAGCATATTGTGCGGAATGCAGATCTGATTCCCATGATTGTTGACATGTTGAAA AGCGGCAGCCGCAGGGTTCGGTGTAGAGCTTTAGAAACACTTCGAATCGTGGCTGAAGAA GACGCTGAGAATAAGGAAATAATGGCCGAGGGGGACACTATACGCACAATAGTTAAATTT TTGTCTCATGAGCTTTCCAAAGAGAGGGAGGAAGCTGTCTCTTTGTTGTATGAGCTTTCC AAATCTGAAACTTTGTGTGAAAAGATTGGCTCACTCAATGGAGCAATTCTTATATTAGTT GGAATGACAAGCAGCAAATCAGAAAATTTATTGACTGTTGAGAAGGCTGATAAAACACTG GAGAATCTTGAGATGTGTGAGAATAATATACGGCAGATGGCTGAAAATGGTCGACTGCAT CCACTTCTTACTCAAATCCTTGAAGGTCCTCCAGAAACTAAATTGTCCATGGCTACTTAC CTTGGTGAGCTGGTTCTGAACAATGATATGCAAGTCTTTGTGGCTAGAACTGTGGGCTTA GCGCTAATAAATATGATGAAAAGTGGCAACCTGCAATTGAGAGAAGCTGCTTTAAAAGCT TTAAACCAGATTTCATCTTTTGATGCCAGTGCCAGGGTGTTGATAGAGGAAGGAATTCTC CCCCCTCTCATCAAGGACCTCTTAACTGTTGGGACCAACCAACTTCCCATGCGACTCAAA GAGGTCTCTGCAACAATTCTTGCTAATGTTGTGCAGTCGGGCTATGATTTTGATTCCATC CCTGTTGGATCTGATCACCAGACTCTGGTCTCAGAAGACATAGTCCACAACCTACTCCAT CTCATTAGCAACACTGGCCCGGCAATTGAGTGCAAGCTTCTTCAGGTTCTTGTTGGACTC ACCAATTCTCCCACTGCAGTCCTGGATGTTGTTGCAGCCATTAAAAGCTCTGGCGCTACC ATCAGTTTGGTTCAGTTTATTGAGGCCCCACAGAAGGAGTTGCGTCTGGCTTCCATAAAG CTTCTCCAGAATCTCTCTCCACACATGGGCCAGGAACTAGCTGATGCCCTGCGTGGCACA GCCGGCCAGCTTGGCAGCTTAATCAGAGTCATATCTGAAAATATTGGAATCACAGAAGAA CAGGCAGTAGCTGCTGGGCTTTTAGCTGATCTCCCAGAGAGGGATTTGGGACTCACACGA CAGATGTTAGATGAAGGTGCCTTTCAGATGGTCTTCTCTCGAGTTGTCAGGATCCGGCAG GGGGAAACTAGGGGCAACCGCTTCATGACTCCATATCTAGAAGGGCTTGTTCGCGTTCTT GCAAGGGTTACATTTGTGTTGGCTGACGAACCTGATGCCATTGCACTTTGCCGTGAGTAC AATCTTGCTGCTGTCTTCACTGAACTGCTCCAGTCTAATGGCCTTGACAAGGTACAGATG GTTTCTGCCATGTCCCTAGAGAACCTATCACAAGAATCCAAAAACTTGACAAAGTTGCCT GAGTTGCCAGCACCTGGGTTTTGTGCCTCAATCTTTCCTTGTTTGAGCAAGCAGCCTGTC ATAACTGGATTGTGTCGTCTCCACCGTGGCACGTGCTCGCTAAAAGATAGTTTTTGCCTT TTGGAAGGACAGGCCGTGGAGAAGTTGGTCGCTCTTTTAGACCACCAAAATGAGCAGGTT GTTGAAGCAGCACTGGCAGCAATATCAACTTTGTTGGATGATGGGGTAGATATTGAACAA GGGGTGAACATATTGTGTGAAGCAGAGGGAATCAAACCTATACTTGATGTATTACTTGAG AAACGGACAGAGAACCTGAGGAGGAGAGCCGTTTGGGCTGTTGAGAGAATTTTGAGGACT GATGAAATAGCTTATGAAATTTCTGGAGATCCAAATGTGAGCACAGCCCTCGTTGACGCC TTCCAGCATGCTGACTATCGGACCCGGCAGATTGCCGAGCGTGCCCTGAAACACGTGGAC AAGATACCAAACTTCTCAGGCATCTTTCCAAACATAGGATAGATCTTAAAGAGGATGATG CTCAATGGTTAAAACCATGAAGACGGGACCTGTTTGCATTGGTTTATATTTCTCTCTATT TGTCCTGAGGGATCACAGGGCTCATTGAAGCTTATGGTTTCGGCAGTTGAGATAAAAGCT GCAGGTAGATATTGTTGTACACAGGATTTTGATTTGTAGAGGGTTTTCAAAAGCTTGTTC ATTTCTTTTCAACAATGTTGTTTTCATAG