Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g01010.t01
CDS Infomation

cds chromosome:12X:18:708207:712795:1 gene:VIT_18s0122g01010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCAGGTACTGATTTCTCTCCTCCGTTTACCTTATTAGATGTTGGATACAGCAAA
GTCAATGTGTCTGTCATGGAAGATGAAAATTCAAATAATTCAGATAATTTGAAGCAACTC
ACAAATGGAAAGCCTCCGCGACACCTCTCAGTTATGCGGCATTGCATAAGCTCTGCTAGG
CTGCTCGCTGCTACTGATTTTGAATTAGGTACTGGGATGATTGTTAAGTCCCCTCCAGAT
GGAAAATCAGGGTTTTTACCTGTGTTTCGATCAGGAAGCTGTGCTGAGAGAGGACCTAAA
CAGTACATGGAGGACGAGCACATATGTATAGATAATCTTATTGAACATCTAGGTGCAACT
GCAGACTTTCCTTGCCCTGGAGCTTTCTATGGGGTGTTTGATGGCCATGGTGGCACAGAT
GCAGCATCATTTGTCAGAAAGAACATCCTCAAGTTCATGGTTGAGGATTCCCATTTTCCA
CTTTGTGTGCAAAAAGCTATTAAGAGTGCTTTTGTGAAAGCTGATCATGCATTTGCTGAT
GCCAGTTCTCTTGACATCTCCTCTGGCACCACTGCTCTAACTGCCTTTATTTTTGGAAGG
ACAATGCTAATTGCCAATGCTGGAGATTGTCGGGCTGTGCTAGGGAAACGAGGTAGAGCA
CTCGAGCTGTCCAGAGACCACAAACCCAACTGCCCATCTGAAAGATTAAGGATTGAGAAG
CTTGGCGGAGTTGTCTATGATGGCTATCTCAATGGCCAACTATCTGTGGCACGTGCACTT
GGGGATTGGCACATGAAGGTGCCCAAAGGCTCTGCCTGCCCCTTAAGCGCAGAGCCAGAG
TTGCAGGAGACCCTCCTAACTGAGGACGATGAGTTCCTGATAATGGGCTGTGACGGCCTA
TGGGATGTAATGAGCAGCCAGTGTGCTGTGACGATGGCAAGGAAAGAACTAATGCTCCAC
AACGATCCTGAGAGATGTTCAAAAGAGTTGGTTAGGGAGGCACTGAAGCGCGACACCTGT
GATAATCTAACGGTTATTGTGATTTGCTTCTCCCCAGATCCCCCTCCCCGGATTGAGGTC
CCTCAATCACGTGTTCGGAGGAGTATATCGGCAGAAGGATTGAATTTTCTCAAGGGTGTA
CTAGACAGCAACTCTTGA

Peptide Sequence

PEP ID

VIT_18s0122g01010.t01
PEP Infomation

pep chromosome:12X:18:708207:712795:1 gene:VIT_18s0122g01010 transcript:VIT_18s0122g01010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAGTDFSPPFTLLDVGYSKVNVSVMEDENSNNSDNLKQLTNGKPPRHLSVMRHCISSAR
LLAATDFELGTGMIVKSPPDGKSGFLPVFRSGSCAERGPKQYMEDEHICIDNLIEHLGAT
ADFPCPGAFYGVFDGHGGTDAASFVRKNILKFMVEDSHFPLCVQKAIKSAFVKADHAFAD
ASSLDISSGTTALTAFIFGRTMLIANAGDCRAVLGKRGRALELSRDHKPNCPSERLRIEK
LGGVVYDGYLNGQLSVARALGDWHMKVPKGSACPLSAEPELQETLLTEDDEFLIMGCDGL
WDVMSSQCAVTMARKELMLHNDPERCSKELVREALKRDTCDNLTVIVICFSPDPPPRIEV
PQSRVRRSISAEGLNFLKGVLDSNS

Transcript Sequence

Transcript ID

VIT_18s0122g01010.t01
Transcript Infomation

cdna chromosome:12X:18:708207:712795:1 gene:VIT_18s0122g01010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCTTCTCTCTGTAAGCTTTTGTTTTTTTATCTCTCTTCTCCATTGGTTGATTTCTCTT
TCGACACCTTCTTTTTAGGGTTTCTTCTGATCACTGACGCCAAAGAGAAAGGCAAGCATC
AGAATCATCATTGTTATCCATGTTTTTGTGATTGCGTTACCAGAGATAATTGAAAGTCTT
CGATAGTTAAGTAGTTGTTTCGGGATTGAATTGAGCTTTGTAGGGCTTTCAAGATTGAAT
TCGGATTTGTTTGGTGATCGCTCTCTTTAGTTGACTATCTGTGGAGTTTGGTGTTTTATT
CAGATCTCTGGAATTTGGTTGTCCACGAGAAATTGATGCTTGATATAGTTGGAACTGTAA
CTTCGGATTACGGAACTTAAGAAAAAAAAGTAGTTTGAGGAACTTGATATATGTATCAGA
AGGGAAAATGGCGGCAGGTACTGATTTCTCTCCTCCGTTTACCTTATTAGATGTTGGATA
CAGCAAAGTCAATGTGTCTGTCATGGAAGATGAAAATTCAAATAATTCAGATAATTTGAA
GCAACTCACAAATGGAAAGCCTCCGCGACACCTCTCAGTTATGCGGCATTGCATAAGCTC
TGCTAGGCTGCTCGCTGCTACTGATTTTGAATTAGGTACTGGGATGATTGTTAAGTCCCC
TCCAGATGGAAAATCAGGGTTTTTACCTGTGTTTCGATCAGGAAGCTGTGCTGAGAGAGG
ACCTAAACAGTACATGGAGGACGAGCACATATGTATAGATAATCTTATTGAACATCTAGG
TGCAACTGCAGACTTTCCTTGCCCTGGAGCTTTCTATGGGGTGTTTGATGGCCATGGTGG
CACAGATGCAGCATCATTTGTCAGAAAGAACATCCTCAAGTTCATGGTTGAGGATTCCCA
TTTTCCACTTTGTGTGCAAAAAGCTATTAAGAGTGCTTTTGTGAAAGCTGATCATGCATT
TGCTGATGCCAGTTCTCTTGACATCTCCTCTGGCACCACTGCTCTAACTGCCTTTATTTT
TGGAAGGACAATGCTAATTGCCAATGCTGGAGATTGTCGGGCTGTGCTAGGGAAACGAGG
TAGAGCACTCGAGCTGTCCAGAGACCACAAACCCAACTGCCCATCTGAAAGATTAAGGAT
TGAGAAGCTTGGCGGAGTTGTCTATGATGGCTATCTCAATGGCCAACTATCTGTGGCACG
TGCACTTGGGGATTGGCACATGAAGGTGCCCAAAGGCTCTGCCTGCCCCTTAAGCGCAGA
GCCAGAGTTGCAGGAGACCCTCCTAACTGAGGACGATGAGTTCCTGATAATGGGCTGTGA
CGGCCTATGGGATGTAATGAGCAGCCAGTGTGCTGTGACGATGGCAAGGAAAGAACTAAT
GCTCCACAACGATCCTGAGAGATGTTCAAAAGAGTTGGTTAGGGAGGCACTGAAGCGCGA
CACCTGTGATAATCTAACGGTTATTGTGATTTGCTTCTCCCCAGATCCCCCTCCCCGGAT
TGAGGTCCCTCAATCACGTGTTCGGAGGAGTATATCGGCAGAAGGATTGAATTTTCTCAA
GGGTGTACTAGACAGCAACTCTTGAAGAAAAGGGAAATAGTTCGAGTAAAGAAGGGCCGC
GTTCAAGAAGGAAAATGATAGAAAAAAAAAAAGGCAAAAGGGAAATCTGAAAAAGCGTCT
GTACAAAGAGATTGCAGGTAGAGTGACCACTGTTGTGGGGGTATTCCCTTCCCCCACCAG
GAGAAGCTGCTGCTGATTTCCGGGGGAGGCTAACATTCAGCCTTATTGATCCTTCAAAGT
AATGTACACGTCTGAGATACAATCGTGTTGTAACAACTGGAAGAACTAATTGTTTATTTC
TCTGGCTGCATAGGTTTCTTTCTCCAACCGAAAAAATTTGATGACTCGAGAAGCATGCTA
TTTCTCTACCACCCAAGTTCTCTGGCAGTTTTTCTGTTTTTGTGGGTCCAGCTACTAGAT
ATGCACTCAATTGTTGAGATGCCTTAAAATTATTTGATTAC