Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00980.t01
CDS Infomation

cds chromosome:12X:18:694337:696186:1 gene:VIT_18s0122g00980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCCACTTCACTACTTCTCCTGCCACTTCTCCTCCTTCTCTGCCTATTTCCGGCG
GTTTCCTCCGTCGGCGTAAACTACGGCACTCTCGGAAACAACCTCCCTCCGCCCAAGAAG
GTGGCTCAGCTACTCCAATCCACTCTCATCGACAAGGTCAAGATCTACGACACAAACCCA
GAAATCCTAGAGGCCTTTTCCAACACAGGCATAGACCTCATCGTCGCCGTCGAAAATTAC
CACGTCTCCAACATCAGCTCCGATGTGGCCGCCGCCGACGAGTGGTTCGCCACCCGCGTC
GCGCCCTTCATTCCCGCCACTTCCATCGTCGCCATTGCAGTGGGTAATGAGTATTTGACC
ACTGATACTGACCACTTGGCCCTTAATGCCCTGGTTCAAGCAATGCAGAACCTTCATGGA
GTCCTACTAGCTCGTGGACTCGACCGGAAAATCAAGGTCACCACCCCACATAGTATGGCT
GTGCTCGCTTCTTCGTTTCCTCCTTCAGCTTCCACCTTCGCCCTGGAACTCATCCCAACC
ATGACCTCCATTGTTGGGTTCATAGCTGATACTGGTGCGCCATTCATGATCAACGCCTAC
CCATATTTTGCCTACAGAGACAATCCGGGAAAAATCGATCTGGAATACGCATTGCTCGGG
AACACAACTGGGGTACGCGACCCAAAGGGGTTTGTGTATAACAACATGCTCGATGCCCAA
ATCGACGCCGTCCGATCAGCCATCAACGCTCTGGGTTTCGGAAATCGGACCATAGAGATC
ACCGTATCGGAATCCGGGTGGCCGTCGAAGGGTGAGGCTGGGGACTCCGCGGCCACACCG
GAAAACGCAAAAAAATACAATACCAGACTGATCGAACGTGGGCAGTCAGATAAAGGCACA
CCCATGAGGCCGAAGGACAAGGTGGAGGTGTTTGTGTTCGCTTTGTTCAATGAGAACAAA
AAGGGAGGTGGAGTGAGTGAGAGAAACTTTGGGATTTTGAACGGCGACGGGTCTAAGGTA
TATGAGATAGATTTGAGCTGTAAATTCTGCAGCGGCAATGGAGGTGCGGTGGGGTTCGGT
GAGAAAGTAGCGAACGCAGCGAGGGGTCCTTCGGTTTGGTGCGTAGCAAAGCCCCATGCA
GATGAGAAGGTGCTGCAGGCGGTGCTGGACTTCTGCTGTGGGCCTGGTGGGGTGGACTGC
AGAGAGATATATGGAAGTGGGGATTGTTTTGAGCCGAATAAGCTTCATGCACATTCATCA
TACGCCATGAATGCGTATTATCAGATGCATGGGAGGAACTACTGGAACTGTGATTTCAAA
GGCGCTGGCCTCGTTACCTTCGGTGATCCAAGTTATGGGAGATGCCGATATCCTCAACAG
TGA

Peptide Sequence

PEP ID

VIT_18s0122g00980.t01
PEP Infomation

pep chromosome:12X:18:694337:696186:1 gene:VIT_18s0122g00980 transcript:VIT_18s0122g00980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPTSLLLLPLLLLLCLFPAVSSVGVNYGTLGNNLPPPKKVAQLLQSTLIDKVKIYDTNP
EILEAFSNTGIDLIVAVENYHVSNISSDVAAADEWFATRVAPFIPATSIVAIAVGNEYLT
TDTDHLALNALVQAMQNLHGVLLARGLDRKIKVTTPHSMAVLASSFPPSASTFALELIPT
MTSIVGFIADTGAPFMINAYPYFAYRDNPGKIDLEYALLGNTTGVRDPKGFVYNNMLDAQ
IDAVRSAINALGFGNRTIEITVSESGWPSKGEAGDSAATPENAKKYNTRLIERGQSDKGT
PMRPKDKVEVFVFALFNENKKGGGVSERNFGILNGDGSKVYEIDLSCKFCSGNGGAVGFG
EKVANAARGPSVWCVAKPHADEKVLQAVLDFCCGPGGVDCREIYGSGDCFEPNKLHAHSS
YAMNAYYQMHGRNYWNCDFKGAGLVTFGDPSYGRCRYPQQ

Transcript Sequence

Transcript ID

VIT_18s0122g00980.t01
Transcript Infomation

cdna chromosome:12X:18:694337:696186:1 gene:VIT_18s0122g00980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCCACTTCACTACTTCTCCTGCCACTTCTCCTCCTTCTCTGCCTATTTCCGGCG
GTTTCCTCCGTCGGCGTAAACTACGGCACTCTCGGAAACAACCTCCCTCCGCCCAAGAAG
GTGGCTCAGCTACTCCAATCCACTCTCATCGACAAGGTCAAGATCTACGACACAAACCCA
GAAATCCTAGAGGCCTTTTCCAACACAGGCATAGACCTCATCGTCGCCGTCGAAAATTAC
CACGTCTCCAACATCAGCTCCGATGTGGCCGCCGCCGACGAGTGGTTCGCCACCCGCGTC
GCGCCCTTCATTCCCGCCACTTCCATCGTCGCCATTGCAGTGGGTAATGAGTATTTGACC
ACTGATACTGACCACTTGGCCCTTAATGCCCTGGTTCAAGCAATGCAGAACCTTCATGGA
GTCCTACTAGCTCGTGGACTCGACCGGAAAATCAAGGTCACCACCCCACATAGTATGGCT
GTGCTCGCTTCTTCGTTTCCTCCTTCAGCTTCCACCTTCGCCCTGGAACTCATCCCAACC
ATGACCTCCATTGTTGGGTTCATAGCTGATACTGGTGCGCCATTCATGATCAACGCCTAC
CCATATTTTGCCTACAGAGACAATCCGGGAAAAATCGATCTGGAATACGCATTGCTCGGG
AACACAACTGGGGTACGCGACCCAAAGGGGTTTGTGTATAACAACATGCTCGATGCCCAA
ATCGACGCCGTCCGATCAGCCATCAACGCTCTGGGTTTCGGAAATCGGACCATAGAGATC
ACCGTATCGGAATCCGGGTGGCCGTCGAAGGGTGAGGCTGGGGACTCCGCGGCCACACCG
GAAAACGCAAAAAAATACAATACCAGACTGATCGAACGTGGGCAGTCAGATAAAGGCACA
CCCATGAGGCCGAAGGACAAGGTGGAGGTGTTTGTGTTCGCTTTGTTCAATGAGAACAAA
AAGGGAGGTGGAGTGAGTGAGAGAAACTTTGGGATTTTGAACGGCGACGGGTCTAAGGTA
TATGAGATAGATTTGAGCTGTAAATTCTGCAGCGGCAATGGAGGTGCGGTGGGGTTCGGT
GAGAAAGTAGCGAACGCAGCGAGGGGTCCTTCGGTTTGGTGCGTAGCAAAGCCCCATGCA
GATGAGAAGGTGCTGCAGGCGGTGCTGGACTTCTGCTGTGGGCCTGGTGGGGTGGACTGC
AGAGAGATATATGGAAGTGGGGATTGTTTTGAGCCGAATAAGCTTCATGCACATTCATCA
TACGCCATGAATGCGTATTATCAGATGCATGGGAGGAACTACTGGAACTGTGATTTCAAA
GGCGCTGGCCTCGTTACCTTCGGTGATCCAAGTTATGGGAGATGCCGATATCCTCAACAG
TGATCAAGCAGTAGAAAGGTGGTGGATGTGGTTGACAGCTCATTTGTAATGCTTGTTAGT
ATCATTAGCTTGGACCAAAAGTGAAAATGTGAGCAGTGAAAATTTGATGTATTGATTGTA
AGGTGATATGACATGAATCTTATAATTTGAATGGG