Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00860.t01
CDS Infomation

cds chromosome:12X:18:620710:623967:-1 gene:VIT_18s0122g00860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATTAGTTTGGAATCCACAATTTCATTCCATTTCTTCTCAGCCCTCAATCTGCGGT
TGGAAGCATGGGATTTCTTCAAACATACTTGAACATAGAAGAGAATTGGGGTTAAGTTAT
AGTCGCTATAACTGGGTTCAACAAAGGACGGCTCGAAGTTTTCTGTTCAGAGCCTTAAGC
AAGTCTGCGAATTCTGATGAAGATAAAGTTGTTAAAACCGAGACAGAAATCAATGGTTGG
AAAAACTCAATTGGAAAACTTCAAGAAACGATTAAATCTTTTCCTCCTGTTGTTTTTGTG
ATGAAAAAGGATGTGGGAATAAATTTTGCCATTGGATTATGTGTTGCAACAACAATTTTG
GTTGTTGCCGTCAGAGTATATGTGGCAAGGAAGGTGAGTAGCAGCCGTCCTGGTTCTGTT
GCCGATCTTGTCAGACGTGGTCAGCTGAGATCTGATAGAAGAGGCATCTCAAGTCCTCTC
AAGTATGAAGACCCATTTAATAACCCATTGGTGAAAGTTGGTAAGAGCAATTCCACAGTA
GAAATGTGTGGAAAGGTGTATCGGTTGGCGCCGGTGACTCTTACAAAAGAGCAGCAAGCA
ATCCACCAGAAAAGGAGGTCACGAGCATATCAGTGGAAGAGACCAACCATGTTTCTTAAA
GAAGGAGACTCAATACCTTCCGATGTTGACCCTGATACAGTCAGGTGGATTCCTGCAAAT
CATCCTTTTGCTACCACTGCTAGTGAAATTGATGAGGGCTTGGCTCAAAACAATGTCTAT
CAAAAGCATGGTGTTCCATTCCGTATTCAGGCTGAACATGAGGCACTGCAGAGAAAGCTG
GAAGCACTCCAGAGTGAGCAAAAGCTCAATAAATTAGTTATTGATCCCACAAATGCTAAA
GATTTTGAGAGACCATTCAAACATTTAACGTCACACGAGCAGGCAGGACAGGGCCCCTCT
AATCGCATAGGGAGTGATTCTTCCCCGGAGGAAATGCAGAAACCCTAA

Peptide Sequence

PEP ID

VIT_18s0122g00860.t01
PEP Infomation

pep chromosome:12X:18:620710:623967:-1 gene:VIT_18s0122g00860 transcript:VIT_18s0122g00860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALVWNPQFHSISSQPSICGWKHGISSNILEHRRELGLSYSRYNWVQQRTARSFLFRALS
KSANSDEDKVVKTETEINGWKNSIGKLQETIKSFPPVVFVMKKDVGINFAIGLCVATTIL
VVAVRVYVARKVSSSRPGSVADLVRRGQLRSDRRGISSPLKYEDPFNNPLVKVGKSNSTV
EMCGKVYRLAPVTLTKEQQAIHQKRRSRAYQWKRPTMFLKEGDSIPSDVDPDTVRWIPAN
HPFATTASEIDEGLAQNNVYQKHGVPFRIQAEHEALQRKLEALQSEQKLNKLVIDPTNAK
DFERPFKHLTSHEQAGQGPSNRIGSDSSPEEMQKP

Transcript Sequence

Transcript ID

VIT_18s0122g00860.t01
Transcript Infomation

cdna chromosome:12X:18:620710:623967:-1 gene:VIT_18s0122g00860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCTTCGCAAGCGAGTGACTGCGACTGGGTTTGAGGTTTAGAGGAACGGTAATCTTCCAAA
CCCTAACCCTAACGCTGAAATTTTCATCTACAATGAAATCTCAAAGAACCAAAACCCTAA
ATTCTATTTCTTTCTTAGTGTGAGACATTAATCCCAAATGGCATTAGTTTGGAATCCACA
ATTTCATTCCATTTCTTCTCAGCCCTCAATCTGCGGTTGGAAGCATGGGATTTCTTCAAA
CATACTTGAACATAGAAGAGAATTGGGGTTAAGTTATAGTCGCTATAACTGGGTTCAACA
AAGGACGGCTCGAAGTTTTCTGTTCAGAGCCTTAAGCAAGTCTGCGAATTCTGATGAAGA
TAAAGTTGTTAAAACCGAGACAGAAATCAATGGTTGGAAAAACTCAATTGGAAAACTTCA
AGAAACGATTAAATCTTTTCCTCCTGTTGTTTTTGTGATGAAAAAGGATGTGGGAATAAA
TTTTGCCATTGGATTATGTGTTGCAACAACAATTTTGGTTGTTGCCGTCAGAGTATATGT
GGCAAGGAAGGTGAGTAGCAGCCGTCCTGGTTCTGTTGCCGATCTTGTCAGACGTGGTCA
GCTGAGATCTGATAGAAGAGGCATCTCAAGTCCTCTCAAGTATGAAGACCCATTTAATAA
CCCATTGGTGAAAGTTGGTAAGAGCAATTCCACAGTAGAAATGTGTGGAAAGGTGTATCG
GTTGGCGCCGGTGACTCTTACAAAAGAGCAGCAAGCAATCCACCAGAAAAGGAGGTCACG
AGCATATCAGTGGAAGAGACCAACCATGTTTCTTAAAGAAGGAGACTCAATACCTTCCGA
TGTTGACCCTGATACAGTCAGGTGGATTCCTGCAAATCATCCTTTTGCTACCACTGCTAG
TGAAATTGATGAGGGCTTGGCTCAAAACAATGTCTATCAAAAGCATGGTGTTCCATTCCG
TATTCAGGCTGAACATGAGGCACTGCAGAGAAAGCTGGAAGCACTCCAGAGTGAGCAAAA
GCTCAATAAATTAGTTATTGATCCCACAAATGCTAAAGATTTTGAGAGACCATTCAAACA
TTTAACGTCACACGAGCAGGCAGGACAGGGCCCCTCTAATCGCATAGGGAGTGATTCTTC
CCCGGAGGAAATGCAGAAACCCTAAGCTGCCAAGAGTCTTTTATCGCTGTCAAATTTAGT
AGCCTTCATCTTTGCCGATGCCTAAGTCCAGATACTGATTCAATGAGCATCAATTTTTTG
AATTTTAAAGTTGCTGGTTGGAGATACCTATTTGGAAAATCTGAAGGATGGAGTGTAAAT
AGAAGATAGTGTTTACTATGTCCAA