Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00790.t01
CDS Infomation

cds chromosome:12X:18:582136:583697:-1 gene:VIT_18s0122g00790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTCTTTGCCTATTCAGCTTTTGCTAGAGATTTCTCAATTGTGGGCTATTCGCCA
GATGATCTGACTTCCATGGATAAACTCACTGATCTCTTTGAGTCTTGGATGTCAAAACAT
GGAAAAAGTTATAGGAGTTTTGAAGAGAAGTTGCATAGATTTGAGGTGTTTCAGGATAAT
TTGAAGCACATTGATGAGACAAACAAGAAGGTGAGTAGCTACTGGCTTGGATTAAATGAG
TTTGCAGACTTGAGCCATGAAGAATTCAAAAGGAAGTATTTGGGGTTGAAGATTGAGCTG
CCTAAGAGAAGAGACTCCCCTGAAGAATTTAGCTATAAAGATGTTGCGGATTTGCCAAAG
TCTGTGGACTGGAGAAAGAAAGGAGCTGTTGCTCACGTTAAGAACCAAGGAGCATGTGGT
AGTTGCTGGGCATTTTCCACAGTAGCTGCAGTTGAGGGCATAAACCAGATTGTGACTGGG
AATTTGACTGCTCTGTCTGAGCAAGAGTTGATTGATTGCGACAAACCCTTCAACAATGGG
TGCAATGGAGGTCTAATGGATTACGCCTTCGCCTTCATAATCTCTAATGGAGGGCTTCGC
AAGGAAGAAGATTACCCTTATGTAATGGAGGAAGGCACGTGTGGTGAAAAGAAGGAAGAA
TTGGAGGTAGTGACAATTAGCGGATACCATGATGTACCCGAGGACAACGAGCAGAGCTTC
TTGAAGGCACTAGCAAACCAGCCTCTGAGTGTGGCAATTGAGGCTTCAAGCAGAGGCTTC
CAATTCTACAGTGGGGGTATTTTCAATGGGCATTGTGGGACTGAGCTAGATCATGGAGTG
GCAGCTGTTGGATATGGCACATCCAAGGGAGTAGATTACATCACTGTGAAGAACTCCTGG
GGATCCAAATGGGGAGAGAAAGGCTATATAAGGATGAAGAGAAACGTAGGGAAGCCTGAG
GGGATCTGTGGAATCTACAAAATGGCTTCCTATCCTACTAAAAACAAGTGA

Peptide Sequence

PEP ID

VIT_18s0122g00790.t01
PEP Infomation

pep chromosome:12X:18:582136:583697:-1 gene:VIT_18s0122g00790 transcript:VIT_18s0122g00790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVFAYSAFARDFSIVGYSPDDLTSMDKLTDLFESWMSKHGKSYRSFEEKLHRFEVFQDN
LKHIDETNKKVSSYWLGLNEFADLSHEEFKRKYLGLKIELPKRRDSPEEFSYKDVADLPK
SVDWRKKGAVAHVKNQGACGSCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDKPFNNG
CNGGLMDYAFAFIISNGGLRKEEDYPYVMEEGTCGEKKEELEVVTISGYHDVPEDNEQSF
LKALANQPLSVAIEASSRGFQFYSGGIFNGHCGTELDHGVAAVGYGTSKGVDYITVKNSW
GSKWGEKGYIRMKRNVGKPEGICGIYKMASYPTKNK

Transcript Sequence

Transcript ID

VIT_18s0122g00790.t01
Transcript Infomation

cdna chromosome:12X:18:582136:583697:-1 gene:VIT_18s0122g00790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATGGCTCTCTCCCCATTTTCTAATTTTTTCCTTCTCTTCATTTCCATGGCTGTCTTTG
CCTATTCAGCTTTTGCTAGAGATTTCTCAATTGTGGGCTATTCGCCAGATGATCTGACTT
CCATGGATAAACTCACTGATCTCTTTGAGTCTTGGATGTCAAAACATGGAAAAAGTTATA
GGAGTTTTGAAGAGAAGTTGCATAGATTTGAGGTGTTTCAGGATAATTTGAAGCACATTG
ATGAGACAAACAAGAAGGTGAGTAGCTACTGGCTTGGATTAAATGAGTTTGCAGACTTGA
GCCATGAAGAATTCAAAAGGAAGTATTTGGGGTTGAAGATTGAGCTGCCTAAGAGAAGAG
ACTCCCCTGAAGAATTTAGCTATAAAGATGTTGCGGATTTGCCAAAGTCTGTGGACTGGA
GAAAGAAAGGAGCTGTTGCTCACGTTAAGAACCAAGGAGCATGTGGTAGTTGCTGGGCAT
TTTCCACAGTAGCTGCAGTTGAGGGCATAAACCAGATTGTGACTGGGAATTTGACTGCTC
TGTCTGAGCAAGAGTTGATTGATTGCGACAAACCCTTCAACAATGGGTGCAATGGAGGTC
TAATGGATTACGCCTTCGCCTTCATAATCTCTAATGGAGGGCTTCGCAAGGAAGAAGATT
ACCCTTATGTAATGGAGGAAGGCACGTGTGGTGAAAAGAAGGAAGAATTGGAGGTAGTGA
CAATTAGCGGATACCATGATGTACCCGAGGACAACGAGCAGAGCTTCTTGAAGGCACTAG
CAAACCAGCCTCTGAGTGTGGCAATTGAGGCTTCAAGCAGAGGCTTCCAATTCTACAGTG
GGGGTATTTTCAATGGGCATTGTGGGACTGAGCTAGATCATGGAGTGGCAGCTGTTGGAT
ATGGCACATCCAAGGGAGTAGATTACATCACTGTGAAGAACTCCTGGGGATCCAAATGGG
GAGAGAAAGGCTATATAAGGATGAAGAGAAACGTAGGGAAGCCTGAGGGGATCTGTGGAA
TCTACAAAATGGCTTCCTATCCTACTAAAAACAAGTGATAATTATTCAATGAAACCCTCC
TCCAAGACTACAAGCAGGGCTTATCTTCCTTCTTTCAGTTTCCTTTTCCTTTCCTCTTCT
GTGTGTAGATTCAAGTTTTCTACTGTCTTATGATTCCAATGGGAAAGCTAATAATATGAC
CTCTTC