Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00700.t01
CDS Infomation

cds chromosome:12X:18:539606:545190:1 gene:VIT_18s0122g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAGGATCTGAAACTGGAATCATGACTACCAGAGAGCCCTTCAGCATGGGTCTCCAG
AAAAATGCGGTACCGTCACAGCCGGTGATACAAAACATGCGCTTAGCCTTCAGTCCAGAC
GGAGCAGCTGTGTACAAGCCCGTTTCCGGGACCTCCCCGCCGTACCAGTCTTCCGGCGGT
ACCGGTGGAGATGGTTCCACCGGCGGCGCCATCATACCTCACGGCCTTAACATGAATATG
GGGAGTGAGCCCTTGAAGAGGAAGAGAGGGAGGCCAAGGAAATACGGCCCAGATGGGACC
ATGGCACTGGCGTTGTCACCTGCTCCTTCTGGTGTGAACGTATCTCAGTCCGGTGGGGCA
TTTTCTTCTCCACCTGCTTCGGCCGGATCAGCCTCACCTTCTTCCTTGAAGAAAGCAAGA
GGCCGACCACCCGGTTCCAGCAAGAAACAGCAAATGGAAGCTCTTGGATCTGCGGGAGTT
GGATTTACACCTCATGTTATCACAGTGAAAGCTGGAGAGGATGTATCATCAAAAATAATG
TCATTTTCTCAGCATGGTCCAAGGGCTGTTTGCATCCTATCAGCAAATGGTGCCATCTCT
AATGTGACTCTCCGCCAACCAGCAACATCTGGTGGCACTGTAACTTATGAGGGACGGTTT
GAAATTCTCTCCCTTTCTGGTTCATTTCTGCTCTCAGAAAATGGTGGTCAGCGAAGCAGA
ACTGGGGGATTAAGCGTGTCATTGTCTGGTCCAGATGGCCGTGTTTTGGGTGGTGGCGTA
GCAGGTCTTTTAACAGCTGCATCCCCTGTTCAGGTAGTTGTGGGTAGTTTTATTGCAGAT
GGCCGCAAGGAATCAAAGTCAGCAAGCCAAGTGGAACCCTCATCAGCCCCACCAAAGATT
GCCCCAGTTGGTGGTGGGGGTGGGGTAACAGGAACAAGCAGCCCCCCGTCTCGTGGGACA
CTGAGTGAGTCATCTGGCGGACCTGGGAGCCCCCTTAACCAGAGCACGGGAGCCTGCAAT
AACAGTAATCCACCAGGAATGACGAGCATCCCATGGAAGTAG

Peptide Sequence

PEP ID

VIT_18s0122g00700.t01
PEP Infomation

pep chromosome:12X:18:539606:545190:1 gene:VIT_18s0122g00700 transcript:VIT_18s0122g00700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPVSGTSPPYQSSGG
TGGDGSTGGAIIPHGLNMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGGA
FSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVITVKAGEDVSSKIM
SFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRSR
TGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKI
APVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPWK

Transcript Sequence

Transcript ID

VIT_18s0122g00700.t01
Transcript Infomation

cdna chromosome:12X:18:539606:545190:1 gene:VIT_18s0122g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAATTCTCGCATTTCCTCAGAAAAGCCTCTGAGCTGCTCTTCCCATCTGAAACCCTAA
AAATTTATTCTCTTCTCTCGTTTGGATCGCTGTATTTTTCCTCATTTATTGTTTTTGGAC
AGTGAGTGAGCTTACTCGGATTTCAGTATGTAGCTTTAGATTATTTGCGAAGTCCTTGCT
TTGTTCCTGAGTGGTTGTTTTCAAGTGAAGTTTGCTCTGTCAAAGTGTTTTCTTTTTGTA
GAGAGAAATCTTACTCACTGACAGTGTGAAATCTATTCTTCGTTGCAGGGTTGTATAGAA
ATTTAGTACCACTTTCCATATATGAAAGATGTCAGGATCTGAAACTGGAATCATGACTAC
CAGAGAGCCCTTCAGCATGGGTCTCCAGAAAAATGCGGTACCGTCACAGCCGGTGATACA
AAACATGCGCTTAGCCTTCAGTCCAGACGGAGCAGCTGTGTACAAGCCCGTTTCCGGGAC
CTCCCCGCCGTACCAGTCTTCCGGCGGTACCGGTGGAGATGGTTCCACCGGCGGCGCCAT
CATACCTCACGGCCTTAACATGAATATGGGGAGTGAGCCCTTGAAGAGGAAGAGAGGGAG
GCCAAGGAAATACGGCCCAGATGGGACCATGGCACTGGCGTTGTCACCTGCTCCTTCTGG
TGTGAACGTATCTCAGTCCGGTGGGGCATTTTCTTCTCCACCTGCTTCGGCCGGATCAGC
CTCACCTTCTTCCTTGAAGAAAGCAAGAGGCCGACCACCCGGTTCCAGCAAGAAACAGCA
AATGGAAGCTCTTGGATCTGCGGGAGTTGGATTTACACCTCATGTTATCACAGTGAAAGC
TGGAGAGGATGTATCATCAAAAATAATGTCATTTTCTCAGCATGGTCCAAGGGCTGTTTG
CATCCTATCAGCAAATGGTGCCATCTCTAATGTGACTCTCCGCCAACCAGCAACATCTGG
TGGCACTGTAACTTATGAGGGACGGTTTGAAATTCTCTCCCTTTCTGGTTCATTTCTGCT
CTCAGAAAATGGTGGTCAGCGAAGCAGAACTGGGGGATTAAGCGTGTCATTGTCTGGTCC
AGATGGCCGTGTTTTGGGTGGTGGCGTAGCAGGTCTTTTAACAGCTGCATCCCCTGTTCA
GGTAGTTGTGGGTAGTTTTATTGCAGATGGCCGCAAGGAATCAAAGTCAGCAAGCCAAGT
GGAACCCTCATCAGCCCCACCAAAGATTGCCCCAGTTGGTGGTGGGGGTGGGGTAACAGG
AACAAGCAGCCCCCCGTCTCGTGGGACACTGAGTGAGTCATCTGGCGGACCTGGGAGCCC
CCTTAACCAGAGCACGGGAGCCTGCAATAACAGTAATCCACCAGGAATGACGAGCATCCC
ATGGAAGTAGACTGAACACTCCGCAGGTCAGCTACCTAACCAATCTCTATGTAGGACCCG
GGCTCTATTGCTGTGTTGGTGATTCCCTTAAAAAAAGAGACCCATTTGTAATTTAAGCCT
TGTGTAAGTTAGTTGTGCATAATAAGGACCACAGGTGACTTTCCAGCTTGACCCTACTGC
TGGCTGTAAAGTTCCAACCAAGTAGTGTGACAGGTGATCTTGGCCGTGTCAGGTAGAAGA
AATTAGAGAGGAGAGGTTGTGCTTTCTTTTAGTAGGTTTTAGATGGAGATGTTGATTGTA
GTTTTCTTTGTATTCTGGCTTTTGCAGTCGGTTTGTTGTTGTTGTTGTTGTTGTTGTTGG
TGCTTATTGTTAACCTCGTGGAAGGTGTTGTAGTTCACTTTTAATCCTAACCTCCGTTTT
ATTGTTGTCTGTTACTTGCGAGTTTCGAGCTGGCTTCCCTTTTGGAATCATGTAAGAAAT
GTTTTATTTTCTTTA