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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00430.t01
CDS Infomation

cds chromosome:12X:18:381788:387241:-1 gene:VIT_18s0122g00430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7UDH1]
Sequence

ATGGCTCTGCGGCAGCCTTGTTCAGTTTCATCATCTTCATCGTCTTTCTTCGGAGGTTAT
CGCCACAGACTCTGCTCGAAGATATCATGGCCAAAATCTCGAAATGTCAACTCCACCAGT
ACTTATTCAGGTTGCAAAGCTTCATGGCAAGAGCTCGCCGGCGTTTTAATATTCTCAGCG
ATTCCTTTCACCGCCGTTAAAGCCATAGCGAATAGCCCTCTCGGAGAGTCGCTTCAGAGC
CGAATGGAGGAGAATAAGAAGGCCGCCGTAAAGAATTCTTCAAAGTTCAAGGCCTTAGCT
GAAAAGGCTAAAAACGAGAGTCTGTGGTATGGAGAAGAACGTCCTCGCTGGCTTGGTCCA
ATCCCATATGACTATCCTGCATATCTCACTGGAGAACTTCCTGGGGATTATGGCTTTGAT
ATTGCTGGTCTGGGCAAGGATCCTGTGGCTTTCCAAAAATATTTCAATTTTGAGATACTG
CATGCGCGCTGGGCTATGCTTGCAGCCCTTGGTGCTCTACTTCCAGAATTATTAGACCTA
TTGGGAGCCTTTCACTTTGTTGAACCTGTCTGGTGGCGAGTCGGCTATTCAAAGCTCAAG
GGAGATACATTAGACTATCTTGGCATCCCAGGATTTCACTTTGCTGGAAGCCAAGGAGTA
ATTGTCATTGCTATTTGCCAAGCCCTGCTGATGGTTGGACCAGAATATGCAAGATATTGT
GGGATTGAAGCTTTGGAGCCTCTGGGAATTTACCTGCCTGGTGATATTAATTATCCAGGA
GGAGCTCTTTTTGATCCCCTGAATCTCTCTAAAGATCCTGTAGCCTTTGAAGAGCTGAAG
GTGAAAGAAATTAAAAACGGGCGCTTAGCAATGGTTGCCTGGCTGGGGTTTTATATACAA
GCTGCTGCTACAGGTAAAGGTCCTGTACAAAACCTTCTTGACCACTTAGCAGATCCCTTC
CACAATAACCTGCTTTCCATTTTCAAAGCCTTGTAA

Peptide Sequence

PEP ID

VIT_18s0122g00430.t01
PEP Infomation

pep chromosome:12X:18:381788:387241:-1 gene:VIT_18s0122g00430 transcript:VIT_18s0122g00430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7UDH1]
Sequence

MALRQPCSVSSSSSSFFGGYRHRLCSKISWPKSRNVNSTSTYSGCKASWQELAGVLIFSA
IPFTAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAKNESLWYGEERPRWLGP
IPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARWAMLAALGALLPELLDL
LGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIAICQALLMVGPEYARYC
GIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ
AAATGKGPVQNLLDHLADPFHNNLLSIFKAL

Transcript Sequence

Transcript ID

VIT_18s0122g00430.t01
Transcript Infomation

cdna chromosome:12X:18:381788:387241:-1 gene:VIT_18s0122g00430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7UDH1]
Sequence

GTAGCAAACAGCCATGGCTCTGCGGCAGCCTTGTTCAGTTTCATCATCTTCATCGTCTTT
CTTCGGAGGTTATCGCCACAGACTCTGCTCGAAGATATCATGGCCAAAATCTCGAAATGT
CAACTCCACCAGTACTTATTCAGGTTGCAAAGCTTCATGGCAAGAGCTCGCCGGCGTTTT
AATATTCTCAGCGATTCCTTTCACCGCCGTTAAAGCCATAGCGAATAGCCCTCTCGGAGA
GTCGCTTCAGAGCCGAATGGAGGAGAATAAGAAGGCCGCCGTAAAGAATTCTTCAAAGTT
CAAGGCCTTAGCTGAAAAGGCTAAAAACGAGAGTCTGTGGTATGGAGAAGAACGTCCTCG
CTGGCTTGGTCCAATCCCATATGACTATCCTGCATATCTCACTGGAGAACTTCCTGGGGA
TTATGGCTTTGATATTGCTGGTCTGGGCAAGGATCCTGTGGCTTTCCAAAAATATTTCAA
TTTTGAGATACTGCATGCGCGCTGGGCTATGCTTGCAGCCCTTGGTGCTCTACTTCCAGA
ATTATTAGACCTATTGGGAGCCTTTCACTTTGTTGAACCTGTCTGGTGGCGAGTCGGCTA
TTCAAAGCTCAAGGGAGATACATTAGACTATCTTGGCATCCCAGGATTTCACTTTGCTGG
AAGCCAAGGAGTAATTGTCATTGCTATTTGCCAAGCCCTGCTGATGGTTGGACCAGAATA
TGCAAGATATTGTGGGATTGAAGCTTTGGAGCCTCTGGGAATTTACCTGCCTGGTGATAT
TAATTATCCAGGAGGAGCTCTTTTTGATCCCCTGAATCTCTCTAAAGATCCTGTAGCCTT
TGAAGAGCTGAAGGTGAAAGAAATTAAAAACGGGCGCTTAGCAATGGTTGCCTGGCTGGG
GTTTTATATACAAGCTGCTGCTACAGGTAAAGGTCCTGTACAAAACCTTCTTGACCACTT
AGCAGATCCCTTCCACAATAACCTGCTTTCCATTTTCAAAGCCTTGTAAAAGTTTTTCTT
TCCTTTGTTTATACATAATGTAAAATGCTGTGTTAAGCTCAAACCCATGTAAAAAT