Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00280.t01
CDS Infomation

cds chromosome:12X:18:299053:304803:-1 gene:VIT_18s0122g00280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCACCGACAACCCCTTACCACTTCACTTCCATTGGACAATTGGAGAGAACACTATCT
CTCCAGTCTTCACTATGTTGGGATTCTAAGAAGGCTCCTTCTTCTCTCTCCAATGCATCC
ATTCCTTCAAATGGAGCTCCAACACCAAAGTCTCCTGCCCAGCTGATTGATGAGATTGCC
ACACTTGAGGTTGAAATTATGCATTTGGAGCGATATCTTCTTTCACTCTATCGTTCAGCT
TTTGAGCAGCATCTACCCACATTTCCAGGAAATTCTGAGCATTTACAACATAAGGCGGGA
TCACCGTTGCAAGTTTTACAAAGTCAACCATCTTACAAAATAGAGCCTGAAATGTGGAGA
GGTGGTGTGGTCCATAGTGGAACTTCTTCCACACATGGTTGGGCTGATTCAGATGATTGG
AATTATGCAGCAACTTCAAAAGTAAAATCTAGAAGGGATGGAAAGAATGGTGATCTTGGT
CATCACAGCCTCGGAGAGTATTTTGGTGCTTCCCACATTGATCACACACTCCATACACCA
GATAAACTTTCTGAAGACATTGTCCAATGCATATCTTCTATCTACTGCAAACTTGCCAAC
CCCCATTCAAGTAGTGCGGGCTTTTCAGTTTCTTCTACCTCGTCCTTGTCCTCCACAAGT
ACATTCTCTGTCCAGAATCTCTTTGATACTTGGAGTCCACATTGCAATGAGGGAGCTACA
GGGCACCATCGATTTCAAGGTTTGAAGGAGGAAAATGCACCATATGCTGCAATGGTAGAA
GTAATGAAGTTATGCCTAGATGATGATAGTTTCAACTATGCTGCTAGCATGCTGCAAAAT
TTCAGGTCATTGGTTCAAAATCTTGCGAAGGTTAACCCAAGGAAGATGAAGCGTGAAGGA
AAACTAGCATTTTGGATCAACATCCATAATGCCTTGGTGATGCATGCGTATTTAGCTTAT
GGAATCCGTAATTGTGTAAAAGGCACATCTATTTTAAAGGCAGCTTACAATGTCGGGGGA
CATTGTGTAAATGCTTATGACATACAAAGCTCCATTTTAGGGATTCGGTCACACAGGCCA
GCACCGTGGCTACAAACACTGCTTTCTCCAGGAAATAAGTCCAGGATGGGGAACAGCAAA
CATATATACGCCATTGAATACCCAGAACCGCTTGTTCATTTTGCCCTTTGTTCAGGGACA
TACTCCGACCCTGTGGTTCGTCTCTATACAGCACAAAATGTATTCCAGAATCTCAAGCTT
GCTAAACAGGAGTTTATTGAAGCCAGTGCCTATGTTGACAAGGGAACAAAGATTTTCCTG
CCAAAGATTCTATCCTACTTTGCAAAAGATACGTCACTGAGTATGCACAAGCTTTTGGAG
GTGGTGACCGGGTGTGTGTCAGAAGCTCAACACAAGGAAATGGAAAGATGCATGAAGGGA
AGGCCTCACAAGTGCATCCATTGGCTACCACAGAGCTCAACCTTTCGTTATGTGATCCAT
GGAGAATTAGCCAATGCCAGAATTGATGTCTGA

Peptide Sequence

PEP ID

VIT_18s0122g00280.t01
PEP Infomation

pep chromosome:12X:18:299053:304803:-1 gene:VIT_18s0122g00280 transcript:VIT_18s0122g00280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPTTPYHFTSIGQLERTLSLQSSLCWDSKKAPSSLSNASIPSNGAPTPKSPAQLIDEIA
TLEVEIMHLERYLLSLYRSAFEQHLPTFPGNSEHLQHKAGSPLQVLQSQPSYKIEPEMWR
GGVVHSGTSSTHGWADSDDWNYAATSKVKSRRDGKNGDLGHHSLGEYFGASHIDHTLHTP
DKLSEDIVQCISSIYCKLANPHSSSAGFSVSSTSSLSSTSTFSVQNLFDTWSPHCNEGAT
GHHRFQGLKEENAPYAAMVEVMKLCLDDDSFNYAASMLQNFRSLVQNLAKVNPRKMKREG
KLAFWINIHNALVMHAYLAYGIRNCVKGTSILKAAYNVGGHCVNAYDIQSSILGIRSHRP
APWLQTLLSPGNKSRMGNSKHIYAIEYPEPLVHFALCSGTYSDPVVRLYTAQNVFQNLKL
AKQEFIEASAYVDKGTKIFLPKILSYFAKDTSLSMHKLLEVVTGCVSEAQHKEMERCMKG
RPHKCIHWLPQSSTFRYVIHGELANARIDV

Transcript Sequence

Transcript ID

VIT_18s0122g00280.t01
Transcript Infomation

cdna chromosome:12X:18:299053:304803:-1 gene:VIT_18s0122g00280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTTGTTGTACTAATCCATTCATGTACATAGCAATGTTGTCATGTTAACAAGTAGAATC
CCTGTTTCAACAATGACTCGGAGAGATACAGATAAAGTTGCAGCTTGTTTATAATTCAGG
TTTCAGAATACGGACAAATAATGCTGGGTGTGGTTTGCCATCATCATCTCCTTCCTCTAT
TCCTTACTGGGTTTTGCAGTGCCATCATCAGCATATGCTAAACATGTCACCGACAACCCC
TTACCACTTCACTTCCATTGGACAATTGGAGAGAACACTATCTCTCCAGTCTTCACTATG
TTGGGATTCTAAGAAGGCTCCTTCTTCTCTCTCCAATGCATCCATTCCTTCAAATGGAGC
TCCAACACCAAAGTCTCCTGCCCAGCTGATTGATGAGATTGCCACACTTGAGGTTGAAAT
TATGCATTTGGAGCGATATCTTCTTTCACTCTATCGTTCAGCTTTTGAGCAGCATCTACC
CACATTTCCAGGAAATTCTGAGCATTTACAACATAAGGCGGGATCACCGTTGCAAGTTTT
ACAAAGTCAACCATCTTACAAAATAGAGCCTGAAATGTGGAGAGGTGGTGTGGTCCATAG
TGGAACTTCTTCCACACATGGTTGGGCTGATTCAGATGATTGGAATTATGCAGCAACTTC
AAAAGTAAAATCTAGAAGGGATGGAAAGAATGGTGATCTTGGTCATCACAGCCTCGGAGA
GTATTTTGGTGCTTCCCACATTGATCACACACTCCATACACCAGATAAACTTTCTGAAGA
CATTGTCCAATGCATATCTTCTATCTACTGCAAACTTGCCAACCCCCATTCAAGTAGTGC
GGGCTTTTCAGTTTCTTCTACCTCGTCCTTGTCCTCCACAAGTACATTCTCTGTCCAGAA
TCTCTTTGATACTTGGAGTCCACATTGCAATGAGGGAGCTACAGGGCACCATCGATTTCA
AGGTTTGAAGGAGGAAAATGCACCATATGCTGCAATGGTAGAAGTAATGAAGTTATGCCT
AGATGATGATAGTTTCAACTATGCTGCTAGCATGCTGCAAAATTTCAGGTCATTGGTTCA
AAATCTTGCGAAGGTTAACCCAAGGAAGATGAAGCGTGAAGGAAAACTAGCATTTTGGAT
CAACATCCATAATGCCTTGGTGATGCATGCGTATTTAGCTTATGGAATCCGTAATTGTGT
AAAAGGCACATCTATTTTAAAGGCAGCTTACAATGTCGGGGGACATTGTGTAAATGCTTA
TGACATACAAAGCTCCATTTTAGGGATTCGGTCACACAGGCCAGCACCGTGGCTACAAAC
ACTGCTTTCTCCAGGAAATAAGTCCAGGATGGGGAACAGCAAACATATATACGCCATTGA
ATACCCAGAACCGCTTGTTCATTTTGCCCTTTGTTCAGGGACATACTCCGACCCTGTGGT
TCGTCTCTATACAGCACAAAATGTATTCCAGAATCTCAAGCTTGCTAAACAGGAGTTTAT
TGAAGCCAGTGCCTATGTTGACAAGGGAACAAAGATTTTCCTGCCAAAGATTCTATCCTA
CTTTGCAAAAGATACGTCACTGAGTATGCACAAGCTTTTGGAGGTGGTGACCGGGTGTGT
GTCAGAAGCTCAACACAAGGAAATGGAAAGATGCATGAAGGGAAGGCCTCACAAGTGCAT
CCATTGGCTACCACAGAGCTCAACCTTTCGTTATGTGATCCATGGAGAATTAGCCAATGC
CAGAATTGATGTCTGATGACTTACTCCTGATTAATTGGCCATATGGTTGCATTTATGAAT
GATAGACACAGCCTTATTTTAAAAAAATCAAAATAAAGGGCAAGCATTTAT