Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0122g00140.t01
CDS Infomation

cds chromosome:12X:18:170535:177523:1 gene:VIT_18s0122g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTCGGAGCAAAACAGATTCCCGCAGCAGGAACGGGAGCGCGAACGGGAACGGCAG
AAGAGATGGGGAGGATGTTGGGGTGGATTGTCTTGTTTTGGTACACAAAAAGGTGGAAAG
CGTATTGTACCTGCATCTCGTATTCCAGAGGGCAATGCATCGGCAACCCAACCAAATGGA
CCTCAAGCAGTTGGGTTGACCAACCAGACCACTGCACTGGCACCATCTCTTCTAGCTCCT
CCTTCTTCACCAGCATCCTTCACAAATTCTGCGCTTCCTTCAACAGCACAGTCACCCAGT
TGTTTTTTGTCAATGTCTGCCAATTCACCTGAAGGTCCTTCATCCACAATGTTTGCAACT
GGACCGTATGCCCATGAGACACAGCTGGTTTCTCCTCCTGTTTTCTCAACCTTCACAACT
GAGCCATCTACTGCCCCTCTCACTCCCCCACCAGAGTTGGCTCATCTAACCACCCCCTCT
TCCCCAGATGTTCCTTTTGCCCAGTTCCTTTCATCTTCCATGGATCTTAAAAGTGCTGGC
AAGACAAATTACATTGCTGCCAATGATCTTCAAGCAACATATTCACTTTATCCTGGAAGC
CCTGCCAGTAGTCTCATATCACCTATTTCAAGGACCTCAGGTGACTGTTTATCATCGTCT
TTCCCTGAACGTGAGTTTCCCCCACGATGGGATCCTTCAATTTCTCCCCAAAATGCTAAA
TATCCAAGGAATGGATCTGGCAGGCTATTTGGGCTGGATACTGCTAGTTCCTCCATCTCG
CAAGATTCAAATTTCTTCTGCCCTGCCACATTTGCTCAATTTTATTTGGATCATACTCAG
CAGTCATATCCTCCATTTCCTTCTGGTGGGAGGCTAAGTCTTTCCAGGGAATCAGATGTT
TACTCTAGTGGTGGAAATGGGCATCAGAATAGGCACAACAAGAATTGTAAGCAAGATGTG
GAGGAAATAGAAGCTTATAGAGCATCCTTTGGGTTCAGCGCAGATGAAATTATCACCACT
ACTCAATATGTAGAGATTTCTGATGTATTGGAGGACTCATTTACCATGACACCTTTTACC
TCTAATAAACCAGACATGGAAGAAAATGTAGTACCTGCAGTGGTACATGAAGGACCTAAA
GATCAAACAAACTTGCTGAATGAGGAAAGCCTTAAATCAGAATCAGGTCTGGTGGATGAA
GGGGGATGCTGTGAAGGGCTTCCCTCATGCAAAACCTTTGAAGATCATAAATCAGAGAGG
CAATCTGGGAATGAGTCTGGATCAAGTACACCTGGTAAGCATATTCTGACTGATGAAGAG
GAAATATTTCCCAAGGGGGCATCCAAAATTGGCAGGAAATATCATCTGGGTTTATCAAGC
TCTGATGCAGAAATTGACTATAGGAGAGGGAGAAGCTTGAGAGAAGGCAAAGGAGATTTT
GCGTGGCATGACTAG

Peptide Sequence

PEP ID

VIT_18s0122g00140.t01
PEP Infomation

pep chromosome:12X:18:170535:177523:1 gene:VIT_18s0122g00140 transcript:VIT_18s0122g00140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSEQNRFPQQERERERERQKRWGGCWGGLSCFGTQKGGKRIVPASRIPEGNASATQPNG
PQAVGLTNQTTALAPSLLAPPSSPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFAT
GPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSMDLKSAG
KTNYIAANDLQATYSLYPGSPASSLISPISRTSGDCLSSSFPEREFPPRWDPSISPQNAK
YPRNGSGRLFGLDTASSSISQDSNFFCPATFAQFYLDHTQQSYPPFPSGGRLSLSRESDV
YSSGGNGHQNRHNKNCKQDVEEIEAYRASFGFSADEIITTTQYVEISDVLEDSFTMTPFT
SNKPDMEENVVPAVVHEGPKDQTNLLNEESLKSESGLVDEGGCCEGLPSCKTFEDHKSER
QSGNESGSSTPGKHILTDEEEIFPKGASKIGRKYHLGLSSSDAEIDYRRGRSLREGKGDF
AWHD

Transcript Sequence

Transcript ID

VIT_18s0122g00140.t01
Transcript Infomation

cdna chromosome:12X:18:170535:177523:1 gene:VIT_18s0122g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAGAGGAAAATCTGTATGGTGTCAGCTTGTGATTAAGGTTCGGATGATATAGAGAGA
GTTGGGGGTAGGAGGAAGAAATATAATGTGAATGGTGGAGTTGGAGAGCGAGCAGTAAGC
AAGTGGAGTGGAGTGGACTAGTATGGGGTCGGAGCAAAACAGATTCCCGCAGCAGGAACG
GGAGCGCGAACGGGAACGGCAGAAGAGATGGGGAGGATGTTGGGGTGGATTGTCTTGTTT
TGGTACACAAAAAGGTGGAAAGCGTATTGTACCTGCATCTCGTATTCCAGAGGGCAATGC
ATCGGCAACCCAACCAAATGGACCTCAAGCAGTTGGGTTGACCAACCAGACCACTGCACT
GGCACCATCTCTTCTAGCTCCTCCTTCTTCACCAGCATCCTTCACAAATTCTGCGCTTCC
TTCAACAGCACAGTCACCCAGTTGTTTTTTGTCAATGTCTGCCAATTCACCTGAAGGTCC
TTCATCCACAATGTTTGCAACTGGACCGTATGCCCATGAGACACAGCTGGTTTCTCCTCC
TGTTTTCTCAACCTTCACAACTGAGCCATCTACTGCCCCTCTCACTCCCCCACCAGAGTT
GGCTCATCTAACCACCCCCTCTTCCCCAGATGTTCCTTTTGCCCAGTTCCTTTCATCTTC
CATGGATCTTAAAAGTGCTGGCAAGACAAATTACATTGCTGCCAATGATCTTCAAGCAAC
ATATTCACTTTATCCTGGAAGCCCTGCCAGTAGTCTCATATCACCTATTTCAAGGACCTC
AGGTGACTGTTTATCATCGTCTTTCCCTGAACGTGAGTTTCCCCCACGATGGGATCCTTC
AATTTCTCCCCAAAATGCTAAATATCCAAGGAATGGATCTGGCAGGCTATTTGGGCTGGA
TACTGCTAGTTCCTCCATCTCGCAAGATTCAAATTTCTTCTGCCCTGCCACATTTGCTCA
ATTTTATTTGGATCATACTCAGCAGTCATATCCTCCATTTCCTTCTGGTGGGAGGCTAAG
TCTTTCCAGGGAATCAGATGTTTACTCTAGTGGTGGAAATGGGCATCAGAATAGGCACAA
CAAGAATTGTAAGCAAGATGTGGAGGAAATAGAAGCTTATAGAGCATCCTTTGGGTTCAG
CGCAGATGAAATTATCACCACTACTCAATATGTAGAGATTTCTGATGTATTGGAGGACTC
ATTTACCATGACACCTTTTACCTCTAATAAACCAGACATGGAAGAAAATGTAGTACCTGC
AGTGGTACATGAAGGACCTAAAGATCAAACAAACTTGCTGAATGAGGAAAGCCTTAAATC
AGAATCAGGTCTGGTGGATGAAGGGGGATGCTGTGAAGGGCTTCCCTCATGCAAAACCTT
TGAAGATCATAAATCAGAGAGGCAATCTGGGAATGAGTCTGGATCAAGTACACCTGGTAA
GCATATTCTGACTGATGAAGAGGAAATATTTCCCAAGGGGGCATCCAAAATTGGCAGGAA
ATATCATCTGGGTTTATCAAGCTCTGATGCAGAAATTGACTATAGGAGAGGGAGAAGCTT
GAGAGAAGGCAAAGGAGATTTTGCGTGGCATGACTAGTCACCAAAGCATTGAAAAAGATG
CTGTTTGTTTCCAATATGTATTAAATTGCAGGTTTCTTCTTTCATACATTTCTGTTTGGG
GTTTTCTGTGGTAGGTGGAATGATCTAACGTATGGTCTAACCTGTGTCTCTTTCTCTCCC
TCTGGCTCAGATGTGTGACCCGATCTCTTTCTGATTGATGAATGTATTGTCTCCATATTT
CTAA