Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0117g00260.t01
CDS Infomation

cds chromosome:12X:18:23472866:23476496:-1 gene:VIT_18s0117g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCCACAGCTGCTCCCCCACCTTCATTCTCCCTCCTTCTCAAAACCCAGAACACC
ACAAACCAACTCAGATCAGTAACACCCAGCAGAAGAAGAAGAAGAAGCAGCAGCAGCCAA
GGTGGTTTTTGGATTTTAGCAGCAGCCCAGGACTCGAAAAACCCCAGGCAGAGAGCCCCA
CCAGGAGTTGACACGAGAATCCACTGGGACAACCCAGATGAAGGGTGGATTGGAGGAAGC
AGTTCAAAGCCAAAGCTGAATGGAGAAGAGGAGGAGAAGAACCTGTTGGGTGAAGAGTTT
TCTGATTTGCTCGATGACTCGTCTGATTCTCATTACCAGTTCTTAGGAATATCTGCACAA
GCTGATCTGGAAGAGATTAAAGCTGCTTACCGGCGTTTATCGAAAGAGTACCATCCAGAC
ACAACTTCACTTCCACTAAAAGCAGCATCTGACAAGTTCTTAAAACTAAGAGAAGTTTAC
GACGTTTTGTGTGATGAAGAGAGACGCAGGTTTTACGACTGGACACTTGCTCAAGAGGCT
GCAAGCCGCAAAGCAGAGAAGATGAAAATGAAGTTAGAGGATCCTTACCAGAAAGATGTC
CAGAACTGGGAATCCATTCCAGACATGGTAGACCGTCTAGGTGGAAGGAACATGGAGTTG
AGTGATCAAGCAGTCACAGCCCTCACCTTTGATATATTAATCATTATTTTTGCAATTTGT
TGTATAATTTATGTGCTTGTCTTCAAGGAACCAAATTACTAG

Peptide Sequence

PEP ID

VIT_18s0117g00260.t01
PEP Infomation

pep chromosome:12X:18:23472866:23476496:-1 gene:VIT_18s0117g00260 transcript:VIT_18s0117g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASTAAPPPSFSLLLKTQNTTNQLRSVTPSRRRRRSSSSQGGFWILAAAQDSKNPRQRAP
PGVDTRIHWDNPDEGWIGGSSSKPKLNGEEEEKNLLGEEFSDLLDDSSDSHYQFLGISAQ
ADLEEIKAAYRRLSKEYHPDTTSLPLKAASDKFLKLREVYDVLCDEERRRFYDWTLAQEA
ASRKAEKMKMKLEDPYQKDVQNWESIPDMVDRLGGRNMELSDQAVTALTFDILIIIFAIC
CIIYVLVFKEPNY

Transcript Sequence

Transcript ID

VIT_18s0117g00260.t01
Transcript Infomation

cdna chromosome:12X:18:23472866:23476496:-1 gene:VIT_18s0117g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTGCTTTCACTCCCATGGCTTCCACAGCTGCTCCCCCACCTTCATTCTCCCTCCTTCT
CAAAACCCAGAACACCACAAACCAACTCAGATCAGTAACACCCAGCAGAAGAAGAAGAAG
AAGCAGCAGCAGCCAAGGTGGTTTTTGGATTTTAGCAGCAGCCCAGGACTCGAAAAACCC
CAGGCAGAGAGCCCCACCAGGAGTTGACACGAGAATCCACTGGGACAACCCAGATGAAGG
GTGGATTGGAGGAAGCAGTTCAAAGCCAAAGCTGAATGGAGAAGAGGAGGAGAAGAACCT
GTTGGGTGAAGAGTTTTCTGATTTGCTCGATGACTCGTCTGATTCTCATTACCAGTTCTT
AGGAATATCTGCACAAGCTGATCTGGAAGAGATTAAAGCTGCTTACCGGCGTTTATCGAA
AGAGTACCATCCAGACACAACTTCACTTCCACTAAAAGCAGCATCTGACAAGTTCTTAAA
ACTAAGAGAAGTTTACGACGTTTTGTGTGATGAAGAGAGACGCAGGTTTTACGACTGGAC
ACTTGCTCAAGAGGCTGCAAGCCGCAAAGCAGAGAAGATGAAAATGAAGTTAGAGGATCC
TTACCAGAAAGATGTCCAGAACTGGGAATCCATTCCAGACATGGTAGACCGTCTAGGTGG
AAGGAACATGGAGTTGAGTGATCAAGCAGTCACAGCCCTCACCTTTGATATATTAATCAT
TATTTTTGCAATTTGTTGTATAATTTATGTGCTTGTCTTCAAGGAACCAAATTACTAGGT
AGATACTTGTCCCTTAGCTGATGAGCACATGATACTACAGTAGGTCTATACAAGCTTGTA
CAGCTAATATTCATGAATATTGAACAATAAATTTTTATGATTTTATA