Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0117g00220.t01
CDS Infomation

cds chromosome:12X:18:23429356:23433718:-1 gene:VIT_18s0117g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAAGCTGTTCCGCCGAACCGCTTCTTCTGGTCCTATTCTTTTCACTTCTGGTAAG
CCCCCACTGTCCCTGCACTCTTTACCACTTCCGCCCCGGCAACTCGCAATGCCGGCCACT
GCTACCGCGTTTCACGGCGGCGGCCTCTCCAACCTCGCCTCCTCTTGGTCCACGAGAAAA
TCGATTTCCGTTGCCGCCGCTTTCGGAGGGGGAAACTGCCGCATCTGCCGGTGCTCGATT
GAAGGAGGCGCCGGCGTCAGACTAGCCTGGGGCCGGACTCGGGGGGCGTGGTTCCGTGCG
GGTTCGGAGGATGGGTTTACGGTAAAGACTGTGGAGAAGGGTTCGGGTGGTTGCAGCGTT
GAAGATGAGGAAGATGGGGAGAAGGGTTCGGACGAGAAGCCGTTGAGATTGCAGAGGAGG
CAGAGGGGTTCATCGTCGTTAAACAGTGGGGCTGTGGCTGCAAATGTTGATCTCTTGACG
ATTCCTGGCGTTGGTCCTAGGAATTTGAGGAAGCTTGTGGACAAAGGTATTGGTGGAGTT
GCTGAGCTCAAACAACTCTATAAAGATAAGTTTTTTGGGGAATCCAGTCAGAAGATGGTG
GAGTTTTTGCGGAGTTCTGTAGGAATCATTCACAGAAATCATGCTGAGAGTATAACTACT
TTCATCAAAGAAAGTGTTGATGAAGAATTAAAGGACAATTCCGACTCTGATGCAAAGCCT
ACCCAGAAGAAACGACTCACCTTCTGTGTTGAAGGAAATATCAGTGTTGGGAAGACGACT
TTCCTTCAAAGAATAGCTAATGAAACACTTGAGCTACGTGATCTTGTTGAGATTGTTCCT
GAACCTATTAACAAGTGGCAGGATGTTGGACCTGATCACTTTAATATATTGGATGCATTT
TATGCTGAGCCACAACGGTATGCCTATACCTTTCAGAATTACGTGTTTGTTACCAGAGTT
ATGCAGGAGAGAGAGTCATCTGGTGGAGTTAAGCCTCTGAGGTTGATGGAGAGGAGTGTT
TTCAGTGACAGGATGGTATTTGTACGAGCTGTTCATGAAGCAAACTGGATGAATGAGATG
GAGATCAGCATTTATGACTCATGGTTTGATCCCGTAGTTTCATGCTTGCCTGGGCTGATT
CCTGATGGCTTCATCTATCTTAGAGCAACCCCTGATACCTGCCACAAGAGGATGAAGCTA
CGCAAGAGAAATGAGGAAGGGGGAGTCTCCCTAGAGTATCTACGTGATTTGCATGAAAAG
CATGAGAGCTGGCTTTTCCCATTCCAAAGTGGAAATCACGGGGTATTGTCTGTCAATCAG
CTACCTTTTGGCATCGATAGCTCTTTACATCCTGATATAAGAGATCGCGTGTTCTATTTG
GAGGGTGATCATATGCATTCAAGTATTCAAAAGGTTCCTGCTTTGGTCCTTGACTGTGAG
CCAAACATTGATTTCAGCAAAGACATTGAAGCAAAGCAACAGTATGCTCGCCAAGTTGCA
GAATTTTTTGAATTTGTGAAGAAAAAGAAAGAAGTGCCATCTCTGAAAGCCAGTGAAGAG
GCAGCAGCAAAGAGTAGCCAAGCGCATGTATTGCTACCCCACAAAGGTGGACTGTGGGTA
CCAGATGGGAAGCATTTTCCAGAATCAGCCCTCAAATCTTTGGATTTCAGACGAGCCATG
TCATTTCTTTCTGGTTAG

Peptide Sequence

PEP ID

VIT_18s0117g00220.t01
PEP Infomation

pep chromosome:12X:18:23429356:23433718:-1 gene:VIT_18s0117g00220 transcript:VIT_18s0117g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQKLFRRTASSGPILFTSGKPPLSLHSLPLPPRQLAMPATATAFHGGGLSNLASSWSTRK
SISVAAAFGGGNCRICRCSIEGGAGVRLAWGRTRGAWFRAGSEDGFTVKTVEKGSGGCSV
EDEEDGEKGSDEKPLRLQRRQRGSSSLNSGAVAANVDLLTIPGVGPRNLRKLVDKGIGGV
AELKQLYKDKFFGESSQKMVEFLRSSVGIIHRNHAESITTFIKESVDEELKDNSDSDAKP
TQKKRLTFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPINKWQDVGPDHFNILDAF
YAEPQRYAYTFQNYVFVTRVMQERESSGGVKPLRLMERSVFSDRMVFVRAVHEANWMNEM
EISIYDSWFDPVVSCLPGLIPDGFIYLRATPDTCHKRMKLRKRNEEGGVSLEYLRDLHEK
HESWLFPFQSGNHGVLSVNQLPFGIDSSLHPDIRDRVFYLEGDHMHSSIQKVPALVLDCE
PNIDFSKDIEAKQQYARQVAEFFEFVKKKKEVPSLKASEEAAAKSSQAHVLLPHKGGLWV
PDGKHFPESALKSLDFRRAMSFLSG

Transcript Sequence

Transcript ID

VIT_18s0117g00220.t01
Transcript Infomation

cdna chromosome:12X:18:23429356:23433718:-1 gene:VIT_18s0117g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACTCCTGCTTTTGCTTCTACTTCCCGCGCGCGCTATGTTCCGCTCAAACTTCTCTTTTC
GACTTCCCCTAACAAATGCCCAGTGATGCAGAAGCTGTTCCGCCGAACCGCTTCTTCTGG
TCCTATTCTTTTCACTTCTGGTAAGCCCCCACTGTCCCTGCACTCTTTACCACTTCCGCC
CCGGCAACTCGCAATGCCGGCCACTGCTACCGCGTTTCACGGCGGCGGCCTCTCCAACCT
CGCCTCCTCTTGGTCCACGAGAAAATCGATTTCCGTTGCCGCCGCTTTCGGAGGGGGAAA
CTGCCGCATCTGCCGGTGCTCGATTGAAGGAGGCGCCGGCGTCAGACTAGCCTGGGGCCG
GACTCGGGGGGCGTGGTTCCGTGCGGGTTCGGAGGATGGGTTTACGGTAAAGACTGTGGA
GAAGGGTTCGGGTGGTTGCAGCGTTGAAGATGAGGAAGATGGGGAGAAGGGTTCGGACGA
GAAGCCGTTGAGATTGCAGAGGAGGCAGAGGGGTTCATCGTCGTTAAACAGTGGGGCTGT
GGCTGCAAATGTTGATCTCTTGACGATTCCTGGCGTTGGTCCTAGGAATTTGAGGAAGCT
TGTGGACAAAGGTATTGGTGGAGTTGCTGAGCTCAAACAACTCTATAAAGATAAGTTTTT
TGGGGAATCCAGTCAGAAGATGGTGGAGTTTTTGCGGAGTTCTGTAGGAATCATTCACAG
AAATCATGCTGAGAGTATAACTACTTTCATCAAAGAAAGTGTTGATGAAGAATTAAAGGA
CAATTCCGACTCTGATGCAAAGCCTACCCAGAAGAAACGACTCACCTTCTGTGTTGAAGG
AAATATCAGTGTTGGGAAGACGACTTTCCTTCAAAGAATAGCTAATGAAACACTTGAGCT
ACGTGATCTTGTTGAGATTGTTCCTGAACCTATTAACAAGTGGCAGGATGTTGGACCTGA
TCACTTTAATATATTGGATGCATTTTATGCTGAGCCACAACGGTATGCCTATACCTTTCA
GAATTACGTGTTTGTTACCAGAGTTATGCAGGAGAGAGAGTCATCTGGTGGAGTTAAGCC
TCTGAGGTTGATGGAGAGGAGTGTTTTCAGTGACAGGATGGTATTTGTACGAGCTGTTCA
TGAAGCAAACTGGATGAATGAGATGGAGATCAGCATTTATGACTCATGGTTTGATCCCGT
AGTTTCATGCTTGCCTGGGCTGATTCCTGATGGCTTCATCTATCTTAGAGCAACCCCTGA
TACCTGCCACAAGAGGATGAAGCTACGCAAGAGAAATGAGGAAGGGGGAGTCTCCCTAGA
GTATCTACGTGATTTGCATGAAAAGCATGAGAGCTGGCTTTTCCCATTCCAAAGTGGAAA
TCACGGGGTATTGTCTGTCAATCAGCTACCTTTTGGCATCGATAGCTCTTTACATCCTGA
TATAAGAGATCGCGTGTTCTATTTGGAGGGTGATCATATGCATTCAAGTATTCAAAAGGT
TCCTGCTTTGGTCCTTGACTGTGAGCCAAACATTGATTTCAGCAAAGACATTGAAGCAAA
GCAACAGTATGCTCGCCAAGTTGCAGAATTTTTTGAATTTGTGAAGAAAAAGAAAGAAGT
GCCATCTCTGAAAGCCAGTGAAGAGGCAGCAGCAAAGAGTAGCCAAGCGCATGTATTGCT
ACCCCACAAAGGTGGACTGTGGGTACCAGATGGGAAGCATTTTCCAGAATCAGCCCTCAA
ATCTTTGGATTTCAGACGAGCCATGTCATTTCTTTCTGGTTAGCTCTCCCAGATTCATGT
CTGAGAGGTATCTGTCTTTGTCTCTGGGAGCAATGGCAATGGCAATGGCAATGTGTTTAT
TTCCTATGTGCAT