Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0117g00150.t01
CDS Infomation

cds chromosome:12X:18:23328424:23333793:1 gene:VIT_18s0117g00150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCGAAATTGAAGGGCAATACTACTCACACAGGCGATGGTGCTAGTCCTGGGAAG
ATTTTCATTGGAGGATTGGCGAAGGATACAACCTACGCTGCCTTCAATAAGCACTTTGAG
AAATATGGAGAAATAACAGACTCGGTGATTATGAAAGATCGGTATACTGGTCAACCCAGG
GGATTTGGGTTTGTCACCTATGCTGATCCTTCAGTTGTTGACAGTGTCATTGAAGATACA
CATGTTATTAACGGAAAACAGGTTGAGATTAAAAGAACCATTCCAAAAGGCTCTGGTCAA
TCGAAGGATTTCAAAACAAAGAAGATATTTGTTGGTGGATTACCATCTACAGTCACTGAA
GATGAGTTCAAGGATTTCTTCTCCAAGTATGGGAAGGTGGAGGAGCACCAGATTATACGC
GACCATGAAACCAACCGTTCGCGAGGCTTTGGATTTATAATATTTGAAAGTGAAGAGGTA
GTAGATGAAATATTGTCGGAGGGGAATATGATTGATATGGCAGGCACTCAGGTGGAGATC
AAGAAAGCTGAACCAAAGAAAGCCTCAAACCCACCACATGTTTCCGCATTTGGTAGCAAC
TCTAGGGCTCGTTCTTTCAGTGATGGCTTTGGTGGATTTGGCAGCTCATACGGGAGTTAT
GACAGTGGGTTTGGAGCTGCTCCATATAGGGCAGCTGGAGGTCTGGGCAGTAGGCTTGGT
GGATACGGTGGGTATGGTAGTGATGGTGGGGAGTATGGTGGTGGTTATGGTAGTTTTGGA
AGCAGTAACTTAGGAGGTTACAGAGGGGATCCTTCCCTTGGTTATTCTAGTCGCTTTGGA
CCCTATGGCGGCGGGTTTAGCGGGAGTTATGGTGGAAGTGGTTTAGGTGGATATGGCCAA
GGAGGCGAAAGCTACGGAAATTATGGAGGTTCAGGCTATGCTAGTGGTTATGATTCTGGT
GCTGGTGCTAGTTATGGTGGAGCAGGCGGTCTGTATGGAAGGGGAGGTTATAGTGGCAGT
AGTCGGTACCATCCTTATGCAAGACCTGGGCCTGGTTTTGACAGTAATCCTACTGTGTGA

Peptide Sequence

PEP ID

VIT_18s0117g00150.t01
PEP Infomation

pep chromosome:12X:18:23328424:23333793:1 gene:VIT_18s0117g00150 transcript:VIT_18s0117g00150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR
GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE
DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI
KKAEPKKASNPPHVSAFGSNSRARSFSDGFGGFGSSYGSYDSGFGAAPYRAAGGLGSRLG
GYGGYGSDGGEYGGGYGSFGSSNLGGYRGDPSLGYSSRFGPYGGGFSGSYGGSGLGGYGQ
GGESYGNYGGSGYASGYDSGAGASYGGAGGLYGRGGYSGSSRYHPYARPGPGFDSNPTV

Transcript Sequence

Transcript ID

VIT_18s0117g00150.t01
Transcript Infomation

cdna chromosome:12X:18:23328424:23333793:1 gene:VIT_18s0117g00150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGGAAGTTAGGAACATACATATTTTGCCATATTCGTCGCATCTCTTTTATATCTCCCA
AACCCTAGCCTCTATTCCTCAAATTTTCTCGATCACTTTCTCAAATACTCCAAACACAAG
CCTATGGGTTCGAAATTGAAGGGCAATACTACTCACACAGGCGATGGTGCTAGTCCTGGG
AAGATTTTCATTGGAGGATTGGCGAAGGATACAACCTACGCTGCCTTCAATAAGCACTTT
GAGAAATATGGAGAAATAACAGACTCGGTGATTATGAAAGATCGGTATACTGGTCAACCC
AGGGGATTTGGGTTTGTCACCTATGCTGATCCTTCAGTTGTTGACAGTGTCATTGAAGAT
ACACATGTTATTAACGGAAAACAGGTTGAGATTAAAAGAACCATTCCAAAAGGCTCTGGT
CAATCGAAGGATTTCAAAACAAAGAAGATATTTGTTGGTGGATTACCATCTACAGTCACT
GAAGATGAGTTCAAGGATTTCTTCTCCAAGTATGGGAAGGTGGAGGAGCACCAGATTATA
CGCGACCATGAAACCAACCGTTCGCGAGGCTTTGGATTTATAATATTTGAAAGTGAAGAG
GTAGTAGATGAAATATTGTCGGAGGGGAATATGATTGATATGGCAGGCACTCAGGTGGAG
ATCAAGAAAGCTGAACCAAAGAAAGCCTCAAACCCACCACATGTTTCCGCATTTGGTAGC
AACTCTAGGGCTCGTTCTTTCAGTGATGGCTTTGGTGGATTTGGCAGCTCATACGGGAGT
TATGACAGTGGGTTTGGAGCTGCTCCATATAGGGCAGCTGGAGGTCTGGGCAGTAGGCTT
GGTGGATACGGTGGGTATGGTAGTGATGGTGGGGAGTATGGTGGTGGTTATGGTAGTTTT
GGAAGCAGTAACTTAGGAGGTTACAGAGGGGATCCTTCCCTTGGTTATTCTAGTCGCTTT
GGACCCTATGGCGGCGGGTTTAGCGGGAGTTATGGTGGAAGTGGTTTAGGTGGATATGGC
CAAGGAGGCGAAAGCTACGGAAATTATGGAGGTTCAGGCTATGCTAGTGGTTATGATTCT
GGTGCTGGTGCTAGTTATGGTGGAGCAGGCGGTCTGTATGGAAGGGGAGGTTATAGTGGC
AGTAGTCGGTACCATCCTTATGCAAGACCTGGGCCTGGTTTTGACAGTAATCCTACTGTG
TGAAAAGTTTGGGCATTCATGGCATTCTAACATTCTATCACAACCAGAATTACTTGTGTC
AAGATTTTGGAGGGCTTTCTGAGTTTGGTTTAGATTTTGATAGCATTCAATATATAGTTT
ATTTTGTGTCTTTTATAGTTGAGATAAATTTTACATATTTTCATTTGATTTGTGTCGTGG
GACATGCGGACTATTAAGAATTATAGCC