Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0117g00050.t01
CDS Infomation

cds chromosome:12X:18:23123734:23126823:-1 gene:VIT_18s0117g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGCACCCTTTATTGCAACAAATGGGTCAAGGAGTTGTTCATCAAGCATGTCCTCAA
GAGCCAGGAAAACAGAGCAGATTGTGGAGATCAGAGGATGTCCATCGCATATTGCTCAAA
AATGAAGGGACTGATGCGATTGAAGGGATATTTCTAGATACATCTCCAGCAGAACCAATA
GAGTTTACCATTCTAGATACATCTCCAGCAGTACCAATAGAGTTTACCACTGAAGCTTTT
AAAATGATGAACAAACTTAGATTACTCAAAGTTTGTCGAGGTCATAAATGTGGTTCCATG
GTAAAAAATTATGAAGTGCGTGTTTCTACCAACTTTGAATTTCCATCTTATGAGTTAAGA
TATCTTCATTGGGATGGATATCCTTTGGAATATTTGCCATCAAATTTTCATGGAGAGAAC
CTTGTTGAATTGAATCTGCGGTATAGTAAACTAAGAGTGCTTTGGCAAGGGCTTAAGCCT
CCTGAGAAGTTAAAGCCTCTTGAGAAGTTAAAGGTTATCAATCTCAGTCACTCTCAGCAG
CTCATTCAAATCCCAGACTTCTCCGATACACCAAATCTGGAGAGTCTAATTCTTAAAGGG
TGCACAAACCTTGAGAACATTCCAAGCAGCATTTGGCACTTGGATTCTCTTGTAAATCTT
GATCTCTCTCACTGTTCAAAACTCCAGGAACTTGCAGAGATCCCGTGGAATCTATACTCA
TTGGAATATTTGAACTTGGCATCCTGCAAAAATCTTAAGAGCCTTCCAGAGAGCCTTTGT
AACTTGAAATGTCTTAAGACTCTCAATGTAATCGGGTGTTCAAAACTGCCCGACAACCTG
GGAAGCCTGGAATGTCTAGAGAAGCTTTATGCATCAAGTTCAGAATTGATTAGCCCTCAA
TCGGATTCCTCTTTGGCTGGTTTGTGCTCCTTAAAAGTATTGGATATGCATGACACCAAC
CTAATGCAACGTGCAATCAGTGGTGACATTGGCAGCTTATACTCATTGGAAGAATTAAAC
CTAAGTTACTGTAATTTAACAGAAAAAGAAATTCCCGATGATATTTGCTGCCTATACTCA
TTGAGAGTATTAGATCTAAGTGGAAACCTTTTTCTTGGAGTAACTGATGCCATAAGTCAA
CTTTCTGAGCTAAGAGAGCTTGGGTTGAGGCACTGCAAGAGTCTTCTAGAAATTCCAAAG
CTTCCATCAAGTCTCAGAGTCCTAGATGCCCATGATTGCACAGGCATCAAAACGTTATCA
AGTACATCAGTGTTGCAATGGCAGTGGCAGTTAAATTGCTTCAAATCTGCTTTTTTACAA
GAAATTCAGGAGATGAAATACAGAAGGCTTTTGTCTCTTCCAGCAAATGGTGTCAGCCAG
GGATTTAGTACTGTTATCCCTGGAAGTGGAGAACTTCCAGAGTGGATACAACACCAGGGT
GTTGGCAATGAAGTAATAGTACCGCTACCTCCTAATTGGTACGACAAGGACTTCTTGGGA
TTGGCTTTATGCTGTGTTTATATTCCACAACAGGGTGAACCAGAGAGTAGTACGTCTGAG
AATGAATCAATGGATGAACCAATGGATGAACCAGAGAGTAGTACATCTGAGAATGCCACG
GTGAATATCACGCAACCTTATCATTTAGGATGTGAATTGACTTTCCTTGATGATGAAATT
GGGTTTTTGGATTATCTCTCCTGTGGATCATCCTGCCAATGCGACCATAATGATGGTGTA
TCAGAGTCAGTGTGGGTAACGTATTATTCTAATGTTGCTATTAAGCACAGATATCGCTCC
GATAAACCAAGGTTTTTAAAGGCTTCATTTCGTGGCCATGTTAATGGTAAACCAGTGAAG
GTGGAACAGTGTGGGATTGGTCTTGTACACGTTGATCTTGAGAACAGCAGTGGAGTTGGA
AGTGGTAAGCTCTAG

Peptide Sequence

PEP ID

VIT_18s0117g00050.t01
PEP Infomation

pep chromosome:12X:18:23123734:23126823:-1 gene:VIT_18s0117g00050 transcript:VIT_18s0117g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMHPLLQQMGQGVVHQACPQEPGKQSRLWRSEDVHRILLKNEGTDAIEGIFLDTSPAEPI
EFTILDTSPAVPIEFTTEAFKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELR
YLHWDGYPLEYLPSNFHGENLVELNLRYSKLRVLWQGLKPPEKLKPLEKLKVINLSHSQQ
LIQIPDFSDTPNLESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYS
LEYLNLASCKNLKSLPESLCNLKCLKTLNVIGCSKLPDNLGSLECLEKLYASSSELISPQ
SDSSLAGLCSLKVLDMHDTNLMQRAISGDIGSLYSLEELNLSYCNLTEKEIPDDICCLYS
LRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTLS
STSVLQWQWQLNCFKSAFLQEIQEMKYRRLLSLPANGVSQGFSTVIPGSGELPEWIQHQG
VGNEVIVPLPPNWYDKDFLGLALCCVYIPQQGEPESSTSENESMDEPMDEPESSTSENAT
VNITQPYHLGCELTFLDDEIGFLDYLSCGSSCQCDHNDGVSESVWVTYYSNVAIKHRYRS
DKPRFLKASFRGHVNGKPVKVEQCGIGLVHVDLENSSGVGSGKL

Transcript Sequence

Transcript ID

VIT_18s0117g00050.t01
Transcript Infomation

cdna chromosome:12X:18:23123734:23126823:-1 gene:VIT_18s0117g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGCACCCTTTATTGCAACAAATGGGTCAAGGAGTTGTTCATCAAGCATGTCCTCAA
GAGCCAGGAAAACAGAGCAGATTGTGGAGATCAGAGGATGTCCATCGCATATTGCTCAAA
AATGAAGGGACTGATGCGATTGAAGGGATATTTCTAGATACATCTCCAGCAGAACCAATA
GAGTTTACCATTCTAGATACATCTCCAGCAGTACCAATAGAGTTTACCACTGAAGCTTTT
AAAATGATGAACAAACTTAGATTACTCAAAGTTTGTCGAGGTCATAAATGTGGTTCCATG
GTAAAAAATTATGAAGTGCGTGTTTCTACCAACTTTGAATTTCCATCTTATGAGTTAAGA
TATCTTCATTGGGATGGATATCCTTTGGAATATTTGCCATCAAATTTTCATGGAGAGAAC
CTTGTTGAATTGAATCTGCGGTATAGTAAACTAAGAGTGCTTTGGCAAGGGCTTAAGCCT
CCTGAGAAGTTAAAGCCTCTTGAGAAGTTAAAGGTTATCAATCTCAGTCACTCTCAGCAG
CTCATTCAAATCCCAGACTTCTCCGATACACCAAATCTGGAGAGTCTAATTCTTAAAGGG
TGCACAAACCTTGAGAACATTCCAAGCAGCATTTGGCACTTGGATTCTCTTGTAAATCTT
GATCTCTCTCACTGTTCAAAACTCCAGGAACTTGCAGAGATCCCGTGGAATCTATACTCA
TTGGAATATTTGAACTTGGCATCCTGCAAAAATCTTAAGAGCCTTCCAGAGAGCCTTTGT
AACTTGAAATGTCTTAAGACTCTCAATGTAATCGGGTGTTCAAAACTGCCCGACAACCTG
GGAAGCCTGGAATGTCTAGAGAAGCTTTATGCATCAAGTTCAGAATTGATTAGCCCTCAA
TCGGATTCCTCTTTGGCTGGTTTGTGCTCCTTAAAAGTATTGGATATGCATGACACCAAC
CTAATGCAACGTGCAATCAGTGGTGACATTGGCAGCTTATACTCATTGGAAGAATTAAAC
CTAAGTTACTGTAATTTAACAGAAAAAGAAATTCCCGATGATATTTGCTGCCTATACTCA
TTGAGAGTATTAGATCTAAGTGGAAACCTTTTTCTTGGAGTAACTGATGCCATAAGTCAA
CTTTCTGAGCTAAGAGAGCTTGGGTTGAGGCACTGCAAGAGTCTTCTAGAAATTCCAAAG
CTTCCATCAAGTCTCAGAGTCCTAGATGCCCATGATTGCACAGGCATCAAAACGTTATCA
AGTACATCAGTGTTGCAATGGCAGTGGCAGTTAAATTGCTTCAAATCTGCTTTTTTACAA
GAAATTCAGGAGATGAAATACAGAAGGCTTTTGTCTCTTCCAGCAAATGGTGTCAGCCAG
GGATTTAGTACTGTTATCCCTGGAAGTGGAGAACTTCCAGAGTGGATACAACACCAGGGT
GTTGGCAATGAAGTAATAGTACCGCTACCTCCTAATTGGTACGACAAGGACTTCTTGGGA
TTGGCTTTATGCTGTGTTTATATTCCACAACAGGGTGAACCAGAGAGTAGTACGTCTGAG
AATGAATCAATGGATGAACCAATGGATGAACCAGAGAGTAGTACATCTGAGAATGCCACG
GTGAATATCACGCAACCTTATCATTTAGGATGTGAATTGACTTTCCTTGATGATGAAATT
GGGTTTTTGGATTATCTCTCCTGTGGATCATCCTGCCAATGCGACCATAATGATGGTGTA
TCAGAGTCAGTGTGGGTAACGTATTATTCTAATGTTGCTATTAAGCACAGATATCGCTCC
GATAAACCAAGGTTTTTAAAGGCTTCATTTCGTGGCCATGTTAATGGTAAACCAGTGAAG
GTGGAACAGTGTGGGATTGGTCTTGTACACGTTGATCTTGAGAACAGCAGTGGAGTTGGA
AGTGGTAAGCTCTAGTAATGATCAGAAGCCCCTAAAAGTTTGAGATGATCCACCGACGAT
TCCATGCATAGATCCAAGGCCAAAATTGTAGGATTCACAATGGCACACCCAGAGCTCCTT
CTCCTTGATAGTCTCTCTCTGTCTCTCTGGTTTTGGACCTTTCAAGCCATGACAACATTA
TCGCATGCGGGTCTTGGAATTGATCAACCAAGCTAGGACATCCCTCGCGTTTCAGGCACA
ACACTCAACTGATCAATTGAGGCTTAAGTTGGTTTCCC