Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g01190.t01
CDS Infomation

cds chromosome:12X:18:29077321:29084907:1 gene:VIT_18s0089g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTGTGACAACGCTAACTTTCTTCCCCATCTCCAAACCCTTCTCCATCTTCCATATT
CACACCTCCATTTCTCTCAGAATCAACCCTTGGCCACCAATACGACGTCGAATGGTCTCC
AAAGCATCTCACAGTGCCCACCTTGGTTTAGCCGTTCAGGACGATTTCCACGCTTTTTTG
GAGATTCTTCCTTGTGATTTGCGTAACAATCTTCTGAATGAACCGAAAAGAGCTCAACTT
CTAGAGGTCATTTTGGATCTGGGTCGGTTGCCAGAAGCTCGCTATTTGGGTGACTGCGGT
GGCAAGTATTTGAGGGATACTCAGGTATCAATGGAAGAATTGGAGTATGCTCAAAATGCT
GTCGGGGAATTTGGAGGGGACAATAGAGCTGGCATTGAGGGTACCTTGCACAGGATATCT
GCAATCAGGAGTAGGAATGGAGTGATAGTTGGTTTGACTTGCCGAGTTGGTAGGGCTGTC
AGTGGTCATGTTGATATGATCCGTGATCTGCTTCCATTTGGGGAGAGCATCCTGTTTGTT
GGGAGGCCTGGAGTTGGTAAGACCACTGTTATGAGAGAGATTGCACGGGTCTTGTCCGAT
GAGCTTAACAGAAGAGTGGTGATTGTTGATACTAGCAATGAAATAGGAGGGGATGGGGAT
ATTCCACATGCTGCAATAGGAGGCGCAAGAAGAATGCAGGTTCCTGAACCCTCCATGCAA
CACAGGATCATGATTGAAGCTGTAGAGAATCACATGCCTGAGGTGATCATTGTTGATGAG
ATAGGCACAGAAGCCGAAGCTCTTGCTTGTCGTTCTATTGCTGAGAGAGGCATCATGCTT
ATTGGTACTGCTCATGGAGAGCGGCTTGAGAACATAATAAAGAATCCCACTCTTTCTGAT
CTGGTTGGGGGAATAGAAACTGTTACTTTAGGAGATGCTGAAGCTCGTGCTAGAAGATGT
CAGAAAAGCATTCTTGAACGGAAAGCTCTTCCAACATTTCCTTTCTTGATTGAGATGAGA
GAAAGACACTATTGGGTTACGCATTGGACACAAAGGAGTGTGGATATGTTGCTTCATGGA
AAAAGGCCACTGGTTGAGGTCAGGAGGAGGAATGATCAGTTCGAGGTTGTAATTGAGAGA
GGTACATATGATGGATCTGAGATTTAG

Peptide Sequence

PEP ID

VIT_18s0089g01190.t01
PEP Infomation

pep chromosome:12X:18:29077321:29084907:1 gene:VIT_18s0089g01190 transcript:VIT_18s0089g01190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVTTLTFFPISKPFSIFHIHTSISLRINPWPPIRRRMVSKASHSAHLGLAVQDDFHAFL
EILPCDLRNNLLNEPKRAQLLEVILDLGRLPEARYLGDCGGKYLRDTQVSMEELEYAQNA
VGEFGGDNRAGIEGTLHRISAIRSRNGVIVGLTCRVGRAVSGHVDMIRDLLPFGESILFV
GRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQ
HRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTLSD
LVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYWVTHWTQRSVDMLLHG
KRPLVEVRRRNDQFEVVIERGTYDGSEI

Transcript Sequence

Transcript ID

VIT_18s0089g01190.t01
Transcript Infomation

cdna chromosome:12X:18:29077321:29084907:1 gene:VIT_18s0089g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGAGAGAGATGAGTGTGACAACGCTAACTTTCTTCCCCATCTCCAAACCCTTCTCCA
TCTTCCATATTCACACCTCCATTTCTCTCAGAATCAACCCTTGGCCACCAATACGACGTC
GAATGGTCTCCAAAGCATCTCACAGTGCCCACCTTGGTTTAGCCGTTCAGGACGATTTCC
ACGCTTTTTTGGAGATTCTTCCTTGTGATTTGCGTAACAATCTTCTGAATGAACCGAAAA
GAGCTCAACTTCTAGAGGTCATTTTGGATCTGGGTCGGTTGCCAGAAGCTCGCTATTTGG
GTGACTGCGGTGGCAAGTATTTGAGGGATACTCAGGTATCAATGGAAGAATTGGAGTATG
CTCAAAATGCTGTCGGGGAATTTGGAGGGGACAATAGAGCTGGCATTGAGGGTACCTTGC
ACAGGATATCTGCAATCAGGAGTAGGAATGGAGTGATAGTTGGTTTGACTTGCCGAGTTG
GTAGGGCTGTCAGTGGTCATGTTGATATGATCCGTGATCTGCTTCCATTTGGGGAGAGCA
TCCTGTTTGTTGGGAGGCCTGGAGTTGGTAAGACCACTGTTATGAGAGAGATTGCACGGG
TCTTGTCCGATGAGCTTAACAGAAGAGTGGTGATTGTTGATACTAGCAATGAAATAGGAG
GGGATGGGGATATTCCACATGCTGCAATAGGAGGCGCAAGAAGAATGCAGGTTCCTGAAC
CCTCCATGCAACACAGGATCATGATTGAAGCTGTAGAGAATCACATGCCTGAGGTGATCA
TTGTTGATGAGATAGGCACAGAAGCCGAAGCTCTTGCTTGTCGTTCTATTGCTGAGAGAG
GCATCATGCTTATTGGTACTGCTCATGGAGAGCGGCTTGAGAACATAATAAAGAATCCCA
CTCTTTCTGATCTGGTTGGGGGAATAGAAACTGTTACTTTAGGAGATGCTGAAGCTCGTG
CTAGAAGATGTCAGAAAAGCATTCTTGAACGGAAAGCTCTTCCAACATTTCCTTTCTTGA
TTGAGATGAGAGAAAGACACTATTGGGTTACGCATTGGACACAAAGGAGTGTGGATATGT
TGCTTCATGGAAAAAGGCCACTGGTTGAGGTCAGGAGGAGGAATGATCAGTTCGAGGTTG
TAATTGAGAGAGGTACATATGATGGATCTGAGATTTAGTTTCCATTTTCATCAAGTTGTA
TCATTCTCCACTAGGTGGCTGCTAGTCATTGTTACAGACTCCCTTGTGTGGAGTCGCTCG
AAAATTTGTTTAGTTTGCTACAAAAGATGTTAAAATTTGTACTATTTTTTTCTTTAATGA
TTTATATTTTGAATAATTTAGTC