Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g01120.t01
CDS Infomation

cds chromosome:12X:18:29018757:29021753:1 gene:VIT_18s0089g01120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTTCATCCAGCGGCGGCGTTCCTCCTGGGTTCCGGTTCCACCCGACGGACGAAGAG
CTTCTGCACTACTACTTGAAGAAGAAGGTGTCCTATCAGAAGTTTGATATGGAGGTGATC
AGAGAGGTTGATTTGAATAAGATGGAGCCATGGGAACTCCAAGAGAGATGTAGGATTGGG
TCCACACCACAAAATGAGTGGTACTTCTTCAGCCACAAGGATAGGAAGTATCCAACAGGG
TCAAGGACTAATAGAGCCACAAATGCAGGGTTTTGGAAGGCAACAGGGAGGGACAAATGC
ATAAGAAATAGCTTCAAGAAAATTGGAATGAGGAAAACCCTTGTTTTCTACAGAGGAAGG
GCCCCTCATGGCCAAAAGACTGATTGGATCATGCATGAGTATAGGCTTGAAGATGCTGAT
GATTCTCCAGGAAACCCTAGTGAGGATGGATGGGTGGTGTGCAGGGTTTTCAAGAAGAAG
AACCTATTCAAGCTTGGAACCGAAGGCGGAGGAAGCAGCAGCGCCAGCATGGCCGGCTTA
GACCAACAACTCAACATTAACACATCATCCACCACCGACCATCCCCGATCCTTCACCCAC
AGAGACACCCAATACTTACCACGCCCACAATCCTTACCCTTCCACTACTCCCACATCCCC
ACCCCACAATACTCCCACAATCTCCAATCCCAAACCCTTCTCCCTCCCCACAAGCCCATT
GCCTACGACTTTTCACCTCTCCCTTCCGACTCCCCCGTCATGATCAAGCAGCTCATGTCC
AACCCCCGAGACTGCGAGAGTGCCGGCAGCGAGAGCCTCCGGTACCAGCCCTGCGAGCCG
GGGATGGAGGTGAATACATGTGAGCCGGGGGCTCATCATCATCAGCATATGGTGGGTCCT
GGGAGAGAAGAAAGCTTGAGTGAGTGGAGCATGCTTGATAGGTTGGTGACCTCTCATCTT
AGCCATGAGGATTCATCGTCGAAGGGAGTGAGGTTTGAGGATGGGAATGGTTCGTCGGTT
CAGCAAATGAATCAGCTGTCCTTGCGTGGAGAAATGGACTTCTGGGGGTATGGGAAGTAG

Peptide Sequence

PEP ID

VIT_18s0089g01120.t01
PEP Infomation

pep chromosome:12X:18:29018757:29021753:1 gene:VIT_18s0089g01120 transcript:VIT_18s0089g01120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTSSSGGVPPGFRFHPTDEELLHYYLKKKVSYQKFDMEVIREVDLNKMEPWELQERCRIG
STPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYRGR
APHGQKTDWIMHEYRLEDADDSPGNPSEDGWVVCRVFKKKNLFKLGTEGGGSSSASMAGL
DQQLNINTSSTTDHPRSFTHRDTQYLPRPQSLPFHYSHIPTPQYSHNLQSQTLLPPHKPI
AYDFSPLPSDSPVMIKQLMSNPRDCESAGSESLRYQPCEPGMEVNTCEPGAHHHQHMVGP
GREESLSEWSMLDRLVTSHLSHEDSSSKGVRFEDGNGSSVQQMNQLSLRGEMDFWGYGK

Transcript Sequence

Transcript ID

VIT_18s0089g01120.t01
Transcript Infomation

cdna chromosome:12X:18:29018757:29021753:1 gene:VIT_18s0089g01120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTTCATCCAGCGGCGGCGTTCCTCCTGGGTTCCGGTTCCACCCGACGGACGAAGAG
CTTCTGCACTACTACTTGAAGAAGAAGGTGTCCTATCAGAAGTTTGATATGGAGGTGATC
AGAGAGGTTGATTTGAATAAGATGGAGCCATGGGAACTCCAAGAGAGATGTAGGATTGGG
TCCACACCACAAAATGAGTGGTACTTCTTCAGCCACAAGGATAGGAAGTATCCAACAGGG
TCAAGGACTAATAGAGCCACAAATGCAGGGTTTTGGAAGGCAACAGGGAGGGACAAATGC
ATAAGAAATAGCTTCAAGAAAATTGGAATGAGGAAAACCCTTGTTTTCTACAGAGGAAGG
GCCCCTCATGGCCAAAAGACTGATTGGATCATGCATGAGTATAGGCTTGAAGATGCTGAT
GATTCTCCAGGAAACCCTAGTGAGGATGGATGGGTGGTGTGCAGGGTTTTCAAGAAGAAG
AACCTATTCAAGCTTGGAACCGAAGGCGGAGGAAGCAGCAGCGCCAGCATGGCCGGCTTA
GACCAACAACTCAACATTAACACATCATCCACCACCGACCATCCCCGATCCTTCACCCAC
AGAGACACCCAATACTTACCACGCCCACAATCCTTACCCTTCCACTACTCCCACATCCCC
ACCCCACAATACTCCCACAATCTCCAATCCCAAACCCTTCTCCCTCCCCACAAGCCCATT
GCCTACGACTTTTCACCTCTCCCTTCCGACTCCCCCGTCATGATCAAGCAGCTCATGTCC
AACCCCCGAGACTGCGAGAGTGCCGGCAGCGAGAGCCTCCGGTACCAGCCCTGCGAGCCG
GGGATGGAGGTGAATACATGTGAGCCGGGGGCTCATCATCATCAGCATATGGTGGGTCCT
GGGAGAGAAGAAAGCTTGAGTGAGTGGAGCATGCTTGATAGGTTGGTGACCTCTCATCTT
AGCCATGAGGATTCATCGTCGAAGGGAGTGAGGTTTGAGGATGGGAATGGTTCGTCGGTT
CAGCAAATGAATCAGCTGTCCTTGCGTGGAGAAATGGACTTCTGGGGGTATGGGAAGTAG