Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g00700.t01
CDS Infomation

cds chromosome:12X:18:28531644:28533656:1 gene:VIT_18s0089g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAGGACACCCAATATCCCCAAGGAAGCAGTAGGGAAGAGGAGAGTTGGGGTTTGG
GAAATGGAGGCTTTTACAGTTAAGCTGTTTATATCTATAGCTTTGGTAGGTGTTCTTGGA
CTGTTCTTTCGCCTGTATAATGCCCTGGTGGTGAAGCCGAAGAAGCTGAGATCTATTCTG
AGGAACCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTCGGTAACATAAGGGAGATC
AAAGAGTCACAGTCCACGGCAGTGAAGGACTCCTGCACCGACACCCACAACTGTGCTGCT
GCTCTATTCCCCTTTTTCGAGAAGTGGCGAAATAAATATGGTCAAGTGTTCATGTTTTCA
CTTGGTAACACACAAATATTACATGTGAATCAACCTGATATTGTTAAAGAAATTACTACA
TGCACATCCTTGGACTTTGGGAAGCCCTCATACCAACACAGAGAGCTCGGTCCTTTGCTC
GGCCAGGGTATTCTAACCTCGAATGGAGCCGTCTGGGCTCATAATAGAAAAATCCTTGCT
CCTGAATTGTACATGGATAAGGTCAAGGGAATGATAGGCCTAATTACCGAGTCGGTTGAC
ACATTGTTGAAGACATGGAGGAGCATGATCGAGGCAGAGGGTGGAATTGCAGACATAAGA
ATCGACGAGCACATGAGAAGCTTCTCAGGAGATGTGATCTCAAGGGCTTGTTTTGGTAGC
AGTTACACAAAAGGGGAAGAGATTTTCTTGAGGCTTAGAGCTCTCCAAGAGGCTATGTCC
AAGAAAATTTTTTTGGATATTCCCGGAATGAGATATGTTCCCACCAAGCACAACAGAGAT
GTTTGGGAGCTAGAAAAGGATGTCCGGAATTTGATTCTAAAGGTGGTGAGCGGGAGAGAG
GAGTTAGCTGCCCATGAAAAAGATCTACTGCAGATGGTCCTTGAGGGAGCTAAGAACAGC
GACCTAAGCCAAGAAGCAATAGACAATTTCATTGTCGATAACTGCAAGAACATCTACTTG
GCTGGCTATGAGACCACTGCAGTGTCTGCTGAGTGGTGCCTCATGCTCCTGGCTGCAAAT
CCAGATTGGCAGGCTCGGGTTCGCGAAGAAGTAGTCGAAATCTGTAAAGGTAGAACTCCA
GATGCGGATATGATCCGCAAAATGAAACAGATGACGATGGTGATCCACGAGTCACTGAGA
CTCTACCCGCCAGTAGCGGTGGTGTCGAGGGAGGCCCTAGCGGACATGAAATTCGGAGGC
ATCCATGTGCCAAAGGGGGTGAATGTATGGAGCCTGGTGGTGACACTGCACACAGACCCT
GAAAATTGGGGACCGGACGCGCTTAAGTTCAACCCTGAGAGGTTCGCAAACGGGATCACA
GGTGCCTGCAAGCTCCCACACTTGTACATGCCGTTCGGGGTTGGTCCAAGGGTGTGCCTT
GGCCAGAATTTGGCCATGGTTGAGCTCAAGATACTGATAAGTCTGATACTGTCCAATTTT
TCATTCTCCCTTTCTCCTAATTATAAACACTCACCTGCACTCAGGCTGGTGATAGAGCCT
GAGAATGGAGTCGATCTCTTGGTAAAGAAGTTGTGA

Peptide Sequence

PEP ID

VIT_18s0089g00700.t01
PEP Infomation

pep chromosome:12X:18:28531644:28533656:1 gene:VIT_18s0089g00700 transcript:VIT_18s0089g00700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKRTPNIPKEAVGKRRVGVWEMEAFTVKLFISIALVGVLGLFFRLYNALVVKPKKLRSIL
RNQGISGPPPSFLLGNIREIKESQSTAVKDSCTDTHNCAAALFPFFEKWRNKYGQVFMFS
LGNTQILHVNQPDIVKEITTCTSLDFGKPSYQHRELGPLLGQGILTSNGAVWAHNRKILA
PELYMDKVKGMIGLITESVDTLLKTWRSMIEAEGGIADIRIDEHMRSFSGDVISRACFGS
SYTKGEEIFLRLRALQEAMSKKIFLDIPGMRYVPTKHNRDVWELEKDVRNLILKVVSGRE
ELAAHEKDLLQMVLEGAKNSDLSQEAIDNFIVDNCKNIYLAGYETTAVSAEWCLMLLAAN
PDWQARVREEVVEICKGRTPDADMIRKMKQMTMVIHESLRLYPPVAVVSREALADMKFGG
IHVPKGVNVWSLVVTLHTDPENWGPDALKFNPERFANGITGACKLPHLYMPFGVGPRVCL
GQNLAMVELKILISLILSNFSFSLSPNYKHSPALRLVIEPENGVDLLVKKL

Transcript Sequence

Transcript ID

VIT_18s0089g00700.t01
Transcript Infomation

cdna chromosome:12X:18:28531644:28533656:1 gene:VIT_18s0089g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAGGACACCCAATATCCCCAAGGAAGCAGTAGGGAAGAGGAGAGTTGGGGTTTGG
GAAATGGAGGCTTTTACAGTTAAGCTGTTTATATCTATAGCTTTGGTAGGTGTTCTTGGA
CTGTTCTTTCGCCTGTATAATGCCCTGGTGGTGAAGCCGAAGAAGCTGAGATCTATTCTG
AGGAACCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTCGGTAACATAAGGGAGATC
AAAGAGTCACAGTCCACGGCAGTGAAGGACTCCTGCACCGACACCCACAACTGTGCTGCT
GCTCTATTCCCCTTTTTCGAGAAGTGGCGAAATAAATATGGTCAAGTGTTCATGTTTTCA
CTTGGTAACACACAAATATTACATGTGAATCAACCTGATATTGTTAAAGAAATTACTACA
TGCACATCCTTGGACTTTGGGAAGCCCTCATACCAACACAGAGAGCTCGGTCCTTTGCTC
GGCCAGGGTATTCTAACCTCGAATGGAGCCGTCTGGGCTCATAATAGAAAAATCCTTGCT
CCTGAATTGTACATGGATAAGGTCAAGGGAATGATAGGCCTAATTACCGAGTCGGTTGAC
ACATTGTTGAAGACATGGAGGAGCATGATCGAGGCAGAGGGTGGAATTGCAGACATAAGA
ATCGACGAGCACATGAGAAGCTTCTCAGGAGATGTGATCTCAAGGGCTTGTTTTGGTAGC
AGTTACACAAAAGGGGAAGAGATTTTCTTGAGGCTTAGAGCTCTCCAAGAGGCTATGTCC
AAGAAAATTTTTTTGGATATTCCCGGAATGAGATATGTTCCCACCAAGCACAACAGAGAT
GTTTGGGAGCTAGAAAAGGATGTCCGGAATTTGATTCTAAAGGTGGTGAGCGGGAGAGAG
GAGTTAGCTGCCCATGAAAAAGATCTACTGCAGATGGTCCTTGAGGGAGCTAAGAACAGC
GACCTAAGCCAAGAAGCAATAGACAATTTCATTGTCGATAACTGCAAGAACATCTACTTG
GCTGGCTATGAGACCACTGCAGTGTCTGCTGAGTGGTGCCTCATGCTCCTGGCTGCAAAT
CCAGATTGGCAGGCTCGGGTTCGCGAAGAAGTAGTCGAAATCTGTAAAGGTAGAACTCCA
GATGCGGATATGATCCGCAAAATGAAACAGATGACGATGGTGATCCACGAGTCACTGAGA
CTCTACCCGCCAGTAGCGGTGGTGTCGAGGGAGGCCCTAGCGGACATGAAATTCGGAGGC
ATCCATGTGCCAAAGGGGGTGAATGTATGGAGCCTGGTGGTGACACTGCACACAGACCCT
GAAAATTGGGGACCGGACGCGCTTAAGTTCAACCCTGAGAGGTTCGCAAACGGGATCACA
GGTGCCTGCAAGCTCCCACACTTGTACATGCCGTTCGGGGTTGGTCCAAGGGTGTGCCTT
GGCCAGAATTTGGCCATGGTTGAGCTCAAGATACTGATAAGTCTGATACTGTCCAATTTT
TCATTCTCCCTTTCTCCTAATTATAAACACTCACCTGCACTCAGGCTGGTGATAGAGCCT
GAGAATGGAGTCGATCTCTTGGTAAAGAAGTTGTGA