Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g00400.t01
CDS Infomation

cds chromosome:12X:18:28183894:28184987:-1 gene:VIT_18s0089g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCGGTACGTCCGGCAGCGAACTCCGTACCTCTCTGAAGCTTCCATGGAGGATCCGG
TTCATCCTTGCCGCCTTGAACGCCATCTCTAATGCATCTATTCGCCGTAATGGCACCGTC
AACCGCTGTCTCATGACACTTATTGACTTCAAAGTGCCCCCCTCCGACAAGCCAGTTAAA
GGCGTTACCACCTCCGACAAGCCAGTTAAAGGCGTTACCACCTCCGACACCACAGTCGAC
CCCTCCCGGAACCTGTGGTTTCGCTACTTCCTTCCTCGTGGTACCACTTCCGGGGAAAAT
CTTCCGATCATCGTCTATTTCCACGGCGGCAGCCTCGTGTTCCTTTCCCCCAGCTCCAAG
TCCTACGATGACCTCTGCCGCCGCCTCGCTGGAGAACTCCCCGCCACCGTCGTCTCCGTC
AACTACCGTCTCGCTCCGGAGCACAAATTCCCCTCTCCGTACGAAGACGGCGTCGAAATC
CTCAAATTCATTGACGAAAACCCCCCAGCCAACGCCGATCTAACACGCTGCTTCATCGTA
GGCGACAGCGCCGGCGGCAACCTGGTCCACCACGTAACTGCAAGGGCCGGGGAGCACGAC
TTCCGAAACCTGAAAATCGCCGGAGCCATACTGATACAACCATTTTTCGGCGGAGAAGAG
AGAACAGAATCCGAAATTCAGCTCGCTGGAACTCCGCTATGGTCCGTGGAGCGCACGGAC
TGGTGCTGGAAGGCGTTTCTGCCGGAGGGGTCTGACCGAGACCATCCGGCGGCGAACGTA
TTCGGGCCGAAATCGAGCGATATATCGGGGTTGAAGTTTCCGAAAAGTTTGGTGTTCATG
GGAGGCTTTGATCCATTAAGAGACTGGCAGAAGAGGTATTGTGAAGGACTGAAAGGAAAT
GGAAAAGAAGTGAAGGTGGTTGATTATCCAAATGCCATTCACTCCTTTTATATCTTTCCT
CAATTGCCTGAATCAACTCTATTTCTCACGGAGCTTCAAGATTTCATTTATTCTCAATAA

Peptide Sequence

PEP ID

VIT_18s0089g00400.t01
PEP Infomation

pep chromosome:12X:18:28183894:28184987:-1 gene:VIT_18s0089g00400 transcript:VIT_18s0089g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGTSGSELRTSLKLPWRIRFILAALNAISNASIRRNGTVNRCLMTLIDFKVPPSDKPVK
GVTTSDKPVKGVTTSDTTVDPSRNLWFRYFLPRGTTSGENLPIIVYFHGGSLVFLSPSSK
SYDDLCRRLAGELPATVVSVNYRLAPEHKFPSPYEDGVEILKFIDENPPANADLTRCFIV
GDSAGGNLVHHVTARAGEHDFRNLKIAGAILIQPFFGGEERTESEIQLAGTPLWSVERTD
WCWKAFLPEGSDRDHPAANVFGPKSSDISGLKFPKSLVFMGGFDPLRDWQKRYCEGLKGN
GKEVKVVDYPNAIHSFYIFPQLPESTLFLTELQDFIYSQ

Transcript Sequence

Transcript ID

VIT_18s0089g00400.t01
Transcript Infomation

cdna chromosome:12X:18:28183894:28184987:-1 gene:VIT_18s0089g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCCACTTCTCTCCTCCACAGGAGAAATGTCCGGTACGTCCGGCAGCGAACTCCGTACC
TCTCTGAAGCTTCCATGGAGGATCCGGTTCATCCTTGCCGCCTTGAACGCCATCTCTAAT
GCATCTATTCGCCGTAATGGCACCGTCAACCGCTGTCTCATGACACTTATTGACTTCAAA
GTGCCCCCCTCCGACAAGCCAGTTAAAGGCGTTACCACCTCCGACAAGCCAGTTAAAGGC
GTTACCACCTCCGACACCACAGTCGACCCCTCCCGGAACCTGTGGTTTCGCTACTTCCTT
CCTCGTGGTACCACTTCCGGGGAAAATCTTCCGATCATCGTCTATTTCCACGGCGGCAGC
CTCGTGTTCCTTTCCCCCAGCTCCAAGTCCTACGATGACCTCTGCCGCCGCCTCGCTGGA
GAACTCCCCGCCACCGTCGTCTCCGTCAACTACCGTCTCGCTCCGGAGCACAAATTCCCC
TCTCCGTACGAAGACGGCGTCGAAATCCTCAAATTCATTGACGAAAACCCCCCAGCCAAC
GCCGATCTAACACGCTGCTTCATCGTAGGCGACAGCGCCGGCGGCAACCTGGTCCACCAC
GTAACTGCAAGGGCCGGGGAGCACGACTTCCGAAACCTGAAAATCGCCGGAGCCATACTG
ATACAACCATTTTTCGGCGGAGAAGAGAGAACAGAATCCGAAATTCAGCTCGCTGGAACT
CCGCTATGGTCCGTGGAGCGCACGGACTGGTGCTGGAAGGCGTTTCTGCCGGAGGGGTCT
GACCGAGACCATCCGGCGGCGAACGTATTCGGGCCGAAATCGAGCGATATATCGGGGTTG
AAGTTTCCGAAAAGTTTGGTGTTCATGGGAGGCTTTGATCCATTAAGAGACTGGCAGAAG
AGGTATTGTGAAGGACTGAAAGGAAATGGAAAAGAAGTGAAGGTGGTTGATTATCCAAAT
GCCATTCACTCCTTTTATATCTTTCCTCAATTGCCTGAATCAACTCTATTTCTCACGGAG
CTTCAAGATTTCATTTATTCTCAATAAATTTTCTTTTGATTTTCCTTGGATTTTTCTTTT
GAGTTTGCTTGTTG