Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g00380.t01
CDS Infomation

cds chromosome:12X:18:28167862:28168881:1 gene:VIT_18s0089g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCGGTACAGCCGGCGGCAAAGTCCGTAAATGGCCGGATCTTCCATGGAAGGTCCGA
CTCTTCGTCACAGCCTTTGGGTTCCTCACAGATGCTTCTTTCCGACGTAATGGCAAAGTC
AACCGCTGTCTTATTAACCTCATTGATTGCAAAGTCCCCCCCTCCGACAGGCCAGTTAAC
GGCGTCACCACCTCCGACACCACAGTCGACCCCTCCCGGAACCTCTGGTACCGCTACTTC
GTTCCAAGCGCAGCCGAGGCTGGCAGGATGCTTCCCGTTGTCGTCTACTTCCACGGTGGC
GGATTCGTGATGCTCTCCCCGAGCTCCCAGCTCTTCGACGACCTCTGCCGCCTCCTCGCC
AGAGAACTCCCCGCCGTTATTGTCTCAGTCAACTACCGCCTCGCCCCAGAGCACCGCTGC
CCAGCTTCGTACGAAGACGGCGTCGACGTCCTCAGATTCATCGACGAAAAACCCCCCGCC
AACGCCGATCTAACCCGCTGCTTCATCGTAGGAGACAGCGCCGGCGGCAACATCGCTCAC
CACGTGACTGCCAGAGCCGGGGAGCACAACTTACGAAACTTGCAAATTGCGGGAGTCATC
CCGATACAGCCATATTTCGGCGGAGAAGAGAGAACAGAATCCGAAATTCAGCTCGAGGGA
GCTCCGCTAGTGTCCATGAAGCGCACGGACTGGTGCTGGAAGGCGTTTCTGCCGGAGGGG
TCGGATCGAGACCATCCGGCGGCGAATGTATTCGGGCCGAACTCGAGCGATATATCGGGG
TTAAGGTTTCCGAAAAGTTTGGTGTTCATGGGAGGCTTGGATCCATTGAGAGACTGGCAG
AAGAGGTATTGTGGAGGACTGAAAAGCAACGGAAAAGAAGTGAGGGAGGCTGATTATCCA
AACGCCATGCACTCCTTTTATGCCTTCCCTGAACTGCCTGAATCAACTCTATTTCTGAGG
GAGCTTCAAGATTTCATTTATCCTCAATAA

Peptide Sequence

PEP ID

VIT_18s0089g00380.t01
PEP Infomation

pep chromosome:12X:18:28167862:28168881:1 gene:VIT_18s0089g00380 transcript:VIT_18s0089g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGTAGGKVRKWPDLPWKVRLFVTAFGFLTDASFRRNGKVNRCLINLIDCKVPPSDRPVN
GVTTSDTTVDPSRNLWYRYFVPSAAEAGRMLPVVVYFHGGGFVMLSPSSQLFDDLCRLLA
RELPAVIVSVNYRLAPEHRCPASYEDGVDVLRFIDEKPPANADLTRCFIVGDSAGGNIAH
HVTARAGEHNLRNLQIAGVIPIQPYFGGEERTESEIQLEGAPLVSMKRTDWCWKAFLPEG
SDRDHPAANVFGPNSSDISGLRFPKSLVFMGGLDPLRDWQKRYCGGLKSNGKEVREADYP
NAMHSFYAFPELPESTLFLRELQDFIYPQ

Transcript Sequence

Transcript ID

VIT_18s0089g00380.t01
Transcript Infomation

cdna chromosome:12X:18:28167862:28168881:1 gene:VIT_18s0089g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAGAGAAATGTCCGGTACAGCCGGCGGCAAAGTCCGTAAATGGCCGGATCTTCCATGG
AAGGTCCGACTCTTCGTCACAGCCTTTGGGTTCCTCACAGATGCTTCTTTCCGACGTAAT
GGCAAAGTCAACCGCTGTCTTATTAACCTCATTGATTGCAAAGTCCCCCCCTCCGACAGG
CCAGTTAACGGCGTCACCACCTCCGACACCACAGTCGACCCCTCCCGGAACCTCTGGTAC
CGCTACTTCGTTCCAAGCGCAGCCGAGGCTGGCAGGATGCTTCCCGTTGTCGTCTACTTC
CACGGTGGCGGATTCGTGATGCTCTCCCCGAGCTCCCAGCTCTTCGACGACCTCTGCCGC
CTCCTCGCCAGAGAACTCCCCGCCGTTATTGTCTCAGTCAACTACCGCCTCGCCCCAGAG
CACCGCTGCCCAGCTTCGTACGAAGACGGCGTCGACGTCCTCAGATTCATCGACGAAAAA
CCCCCCGCCAACGCCGATCTAACCCGCTGCTTCATCGTAGGAGACAGCGCCGGCGGCAAC
ATCGCTCACCACGTGACTGCCAGAGCCGGGGAGCACAACTTACGAAACTTGCAAATTGCG
GGAGTCATCCCGATACAGCCATATTTCGGCGGAGAAGAGAGAACAGAATCCGAAATTCAG
CTCGAGGGAGCTCCGCTAGTGTCCATGAAGCGCACGGACTGGTGCTGGAAGGCGTTTCTG
CCGGAGGGGTCGGATCGAGACCATCCGGCGGCGAATGTATTCGGGCCGAACTCGAGCGAT
ATATCGGGGTTAAGGTTTCCGAAAAGTTTGGTGTTCATGGGAGGCTTGGATCCATTGAGA
GACTGGCAGAAGAGGTATTGTGGAGGACTGAAAAGCAACGGAAAAGAAGTGAGGGAGGCT
GATTATCCAAACGCCATGCACTCCTTTTATGCCTTCCCTGAACTGCCTGAATCAACTCTA
TTTCTGAGGGAGCTTCAAGATTTCATTTATCCTCAATAATTTTTCTTTTGATTTTGCATA