Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g00360.t01
CDS Infomation

cds chromosome:12X:18:28144003:28159425:1 gene:VIT_18s0089g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTAAGAAATCGTTGGAGGCGAAGTCGCAGCAGCGGTTGTCCGGCGCAGACCGCAAA
AAGCTGAAGCGAACAATCAAAGAGCGATTTCGTAACGCCTCCGATTCTGAAATCGATTCG
ATTCTTCCTCCTAAGGCTGAGATAACAATTGTGAAGTTACAAAATCGAGTTCATTTGTAT
GGTGTGGAAGGTGGTTTTCCTATGTTTTTTGACATTGATGGGCGAGGAACAGAAATATTC
CCAACAGTTTATGCCCTCTGGAAGGTTCCTGATCTTTTGCCTGCTTTCATCCTGAAGGGG
GGTGAGGTTTCTCGTTTTGTCATTGGAGGTGCTGATCTGATGTTCCCTGGTATTAGCATT
CCTGCTGAAGGGCTACCTTCATTTGCAGAGGGGGAGCCTTGGGCAGTTAAAGTTCCAGGC
AATCTGGCTCCAATTGCTGTTGGGACCACAACTATGAGTAGCACTGCAGCATTAAAAGCT
GGTCTGCGTGGAAAAGCTTTGAGAATAACTCATTACTATCGAGATTCACTCTGGGAATTA
GTTGAGGGCCATTATGTGCCAAATGCAGGATTTTTAGAAGATGTTGTGTTTGAAGATCCT
TCTTTGTCATCAGCTTGTCAGGCTTCTGATTCATGCGAAGGTGTTAATGAGGCTTCAAGT
GATCCACAAAACGACATTAGCAATAAAAAAGAGGGTGAATCTGTTGATGTCTTGGATCTA
ACTTCGGAAGCTAACCCATCTTCAACAGCACAGCTTGATGTTAGCAATGATCCTGCTGAA
CAAATAACTGCCAATGTGGATGATCTGAAGGTAACTGATGAGGAGTCAAATGTTGAGGTT
CATCACACTCTATCCACTGAAGATGTGGATGCACTTTTAGACAAATGTCTGTTGCAAGCC
TTGCATACAACGGTTAAAGATAAAGACCTTCCAATGCCTGGAAGCACATTGTGGGCAGGC
CATGTATTACCTTGTAGGCCTTCAGGCATCACACTTGATATAAAAAAGTCATCCTACAAG
AAATTATCAAAGTGGCTACAGGCTAAATCCTCCACAACATTGATTTCAGTAAAAGAGGAT
AAACATAAAAAAGAGGTGGTATTAAATTCTGTCAACCGCAATCATCCAGAGTACACATCT
TTCAGGCCTGAGAAACGGCAAGTGGAAAAAAGTGATCAGACCAGTGACCATGCTGCTAGT
GAAAGTCGATCACATAAAACACTTGAAGTGGCTGAGATATACAAACCGAGTGTGCATGTC
AATCCTATTTTTGCTTCTGTGGGAGTCGATACGGGGAAACTGTTCAGTGCCTCTGAAGCC
ACCGATATTGTCTTCAGATATATTGAGAAAGAAAATCTGGTCAAACCAACAGACAAATCC
ATGGTGGTATTAGATGCAATATTATGCGATGCTTTGTTCAAAGGAGCTATTAAAAAGGGA
TCAACTTACCCAACTGCAATTCATAAGAAGGAGTTAGGACATACCTTCGTGAATCGCATG
CAAGCTCATCATGTAGTGACAAGAGGAGGTGAGTCAGTTGTTCGCAAAGGTGCCCTTAAA
AATATTCAGATAATGACAGAACGGAGGCAGGGTAACAAGAAGGTGACTAAAGTCTCAGGG
TTTGAATCATTCTTGATGGATGCTGAAGCTTTGGCATCAGAGTTGCAGAAGAAATTTGCT
TGCAGTACGACAGTGGCAGAACTGCCAGGTAAGAAAGGACATGAAGTTCTGGTTCAAGGA
GGTGTGATTGAAGATCTGGCAAAACATCTAGTTGAACAATATGGAATCCCAAAGAGATGC
ATTGAAGTGCTTGATAAAACTAAGAAATGA

Peptide Sequence

PEP ID

VIT_18s0089g00360.t01
PEP Infomation

pep chromosome:12X:18:28144003:28159425:1 gene:VIT_18s0089g00360 transcript:VIT_18s0089g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFKKSLEAKSQQRLSGADRKKLKRTIKERFRNASDSEIDSILPPKAEITIVKLQNRVHLY
GVEGGFPMFFDIDGRGTEIFPTVYALWKVPDLLPAFILKGGEVSRFVIGGADLMFPGISI
PAEGLPSFAEGEPWAVKVPGNLAPIAVGTTTMSSTAALKAGLRGKALRITHYYRDSLWEL
VEGHYVPNAGFLEDVVFEDPSLSSACQASDSCEGVNEASSDPQNDISNKKEGESVDVLDL
TSEANPSSTAQLDVSNDPAEQITANVDDLKVTDEESNVEVHHTLSTEDVDALLDKCLLQA
LHTTVKDKDLPMPGSTLWAGHVLPCRPSGITLDIKKSSYKKLSKWLQAKSSTTLISVKED
KHKKEVVLNSVNRNHPEYTSFRPEKRQVEKSDQTSDHAASESRSHKTLEVAEIYKPSVHV
NPIFASVGVDTGKLFSASEATDIVFRYIEKENLVKPTDKSMVVLDAILCDALFKGAIKKG
STYPTAIHKKELGHTFVNRMQAHHVVTRGGESVVRKGALKNIQIMTERRQGNKKVTKVSG
FESFLMDAEALASELQKKFACSTTVAELPGKKGHEVLVQGGVIEDLAKHLVEQYGIPKRC
IEVLDKTKK

Transcript Sequence

Transcript ID

VIT_18s0089g00360.t01
Transcript Infomation

cdna chromosome:12X:18:28144003:28159425:1 gene:VIT_18s0089g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGTCGCAAGCCTTCAATCGATTCAGAGGGACATAGAGTCCTCAAAACGAAACGTTTTGCG
GAGAGCACACTATGTTTAAGAAATCGTTGGAGGCGAAGTCGCAGCAGCGGTTGTCCGGCG
CAGACCGCAAAAAGCTGAAGCGAACAATCAAAGAGCGATTTCGTAACGCCTCCGATTCTG
AAATCGATTCGATTCTTCCTCCTAAGGCTGAGATAACAATTGTGAAGTTACAAAATCGAG
TTCATTTGTATGGTGTGGAAGGTGGTTTTCCTATGTTTTTTGACATTGATGGGCGAGGAA
CAGAAATATTCCCAACAGTTTATGCCCTCTGGAAGGTTCCTGATCTTTTGCCTGCTTTCA
TCCTGAAGGGGGGTGAGGTTTCTCGTTTTGTCATTGGAGGTGCTGATCTGATGTTCCCTG
GTATTAGCATTCCTGCTGAAGGGCTACCTTCATTTGCAGAGGGGGAGCCTTGGGCAGTTA
AAGTTCCAGGCAATCTGGCTCCAATTGCTGTTGGGACCACAACTATGAGTAGCACTGCAG
CATTAAAAGCTGGTCTGCGTGGAAAAGCTTTGAGAATAACTCATTACTATCGAGATTCAC
TCTGGGAATTAGTTGAGGGCCATTATGTGCCAAATGCAGGATTTTTAGAAGATGTTGTGT
TTGAAGATCCTTCTTTGTCATCAGCTTGTCAGGCTTCTGATTCATGCGAAGGTGTTAATG
AGGCTTCAAGTGATCCACAAAACGACATTAGCAATAAAAAAGAGGGTGAATCTGTTGATG
TCTTGGATCTAACTTCGGAAGCTAACCCATCTTCAACAGCACAGCTTGATGTTAGCAATG
ATCCTGCTGAACAAATAACTGCCAATGTGGATGATCTGAAGGTAACTGATGAGGAGTCAA
ATGTTGAGGTTCATCACACTCTATCCACTGAAGATGTGGATGCACTTTTAGACAAATGTC
TGTTGCAAGCCTTGCATACAACGGTTAAAGATAAAGACCTTCCAATGCCTGGAAGCACAT
TGTGGGCAGGCCATGTATTACCTTGTAGGCCTTCAGGCATCACACTTGATATAAAAAAGT
CATCCTACAAGAAATTATCAAAGTGGCTACAGGCTAAATCCTCCACAACATTGATTTCAG
TAAAAGAGGATAAACATAAAAAAGAGGTGGTATTAAATTCTGTCAACCGCAATCATCCAG
AGTACACATCTTTCAGGCCTGAGAAACGGCAAGTGGAAAAAAGTGATCAGACCAGTGACC
ATGCTGCTAGTGAAAGTCGATCACATAAAACACTTGAAGTGGCTGAGATATACAAACCGA
GTGTGCATGTCAATCCTATTTTTGCTTCTGTGGGAGTCGATACGGGGAAACTGTTCAGTG
CCTCTGAAGCCACCGATATTGTCTTCAGATATATTGAGAAAGAAAATCTGGTCAAACCAA
CAGACAAATCCATGGTGGTATTAGATGCAATATTATGCGATGCTTTGTTCAAAGGAGCTA
TTAAAAAGGGATCAACTTACCCAACTGCAATTCATAAGAAGGAGTTAGGACATACCTTCG
TGAATCGCATGCAAGCTCATCATGTAGTGACAAGAGGAGGTGAGTCAGTTGTTCGCAAAG
GTGCCCTTAAAAATATTCAGATAATGACAGAACGGAGGCAGGGTAACAAGAAGGTGACTA
AAGTCTCAGGGTTTGAATCATTCTTGATGGATGCTGAAGCTTTGGCATCAGAGTTGCAGA
AGAAATTTGCTTGCAGTACGACAGTGGCAGAACTGCCAGGTAAGAAAGGACATGAAGTTC
TGGTTCAAGGAGGTGTGATTGAAGATCTGGCAAAACATCTAGTTGAACAATATGGAATCC
CAAAGAGATGCATTGAAGTGCTTGATAAAACTAAGAAATGAGGACTTGGACACGGTAAGA
AAGTTCCCAGGGAGGTTTTAATTGGAGTTGTGTCAATGATCAAATCACAATATCCTGTCA
AGTATTCCATCTGGAGTTGCATGGAAATGCTTGATATTAGCCCATAAAAGAGAACTGCAG
AGTCTGGTATATCTTTCTTCAATTTGCTTTCTTCACATTTTACCTTTTGGCTTTTACTCA
TAAAAGAAAAAGAAA