Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g00340.t01
CDS Infomation

cds chromosome:12X:18:28113574:28119163:1 gene:VIT_18s0089g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAGATCACGTAGAGCTCTTCTGCAACGAAGAGCTTTAGAGAAAGCTATCATCGGC
CGGAGTCGGTTGTATAAGGTTTCATTGTCTTTGGTCTTTGTGTTGTGGGGCCTTGTCTTT
CTTTTGAGCTTATGGATCAGTCATGGTGATGGATACCAAGATGGATCTGGCATGCCTCTC
ATTGGCATATCAACTTGGGATGAAGCAAAGCAGGGCCTTAATCTAGGTTCTTGTTCTGTT
GATGAACATTCTTTGATAGAAACCAATTCTGACAATTCTTATGAAGGTTCCAGAAATGAT
GCTGAAACTAAGGATTTCACCAATGAATTACATAGCAAAGGAAATGTAAAATCTACCTTG
CCTGTTGAGGAGGGATCTGAGGTGGAGAAATCCAGTTCAGATGTAAAATCCGAAAAGGAT
ACCCCAAAGAATGACAGGTTATCCCGTGCTGTGCCACCGGGCCTTGATGAATTCAAGAGC
AAGGCAATTAGTTATAAAAGTAAATCTGTAACTGGTCAGGCTGGAAACGTCATACATAGA
GTAGAGCCTGGGGGTGCAGATTACAATTATGCTTCAGCTTCAAAGGGAGCGAAGGTCTTG
GCTTCTAACAAGGAAGCAAAGGGTGCTTCAAATATTTTAGGCAAAGACAAGGACAAGTAC
CTTAGAAATCCCTGTTCTGCTGAAGAGAAATTTGTCGTTATTGAACTTTCAGAAGAAACC
TTGGTGGATACTATTGAAATTGCAAATTTTGAGCATTACTCTTCTAATCCAAAAGATTTT
GAGTTGCTGGGCAGTTCGGTTTTTCCAACAGATGAGTGGGTCAAGCTTGGGAATTTTACT
GCTGCAAATGTGAAGCATGCTCAGAGGTTTGCTCTTCACGAGCCAAAATGGGTGAGATAT
CTAAAGTTAAATCTACTGAGCCATCATGGTACAGAATTCTATTGCACACTGAGTGTTGTG
GAAGTATATGGAGTGGATGCTGTTGAGCGAATGCTGGAGGATTTGATCTCTGTTCAAGAT
AATCCATTTGTACCTGAGGAAATTACTGCTGAGAAAAAGTCAATTCCCTCCCAGCCGGAG
CCCACTGAGGGTAATAATCTGTATCAGAAACCTGTTAGTGAAACAGAATCTGACCCTCTA
CTTGACAAACCTGAAGCTATTAAAAGTAACATGCCAGATCCAGTTGAAGAAATTCGTCAT
CAACAGGTTGGAAGGATGCCTGGGGACACTGTTCTTAAGATACTGATGCAAAAAGTTCAA
TCACTTGATTTAAGTTTGTCTGTTTTGGAGCGATACCTGGAGGATTTGAACTCCAGATAT
GGTAACATTTTCAAAGAATTTGACAAAGAAATTGAGGAGAAAGATGTTCTTCTGGAGAAT
ATAAGATCAGACATAAGGAACTTCCTTGATAGCAAGGAGATTATTACCAAAGATGTCAGT
GATCTTATTTCATGGAAATCCCTTGTTTCCCTACAGTTGGATAATCTACTCAAGGACAAT
GCTCTTCTCAGAGCGGAGGTCCAAAAGGTTCAGGAGGACCAGACACACATGGAGAATAAG
GGTATTGCAGTGTTTCTTATATGCCTAATTTTCGGATTCTGGGCTTTTGCGAGGCTATTG
GTAGATATGATGTTGAGTGTTTACATGGCGGTGAGTGTTAATAATAGATCAGATAAATCC
AGGAATTTTTGTGGGACGAGCTCTTCCTGGGTATTCCTGCTATTGAGCTGTAGCATTATT
ATTGTGATCCTGTCATTATAA

Peptide Sequence

PEP ID

VIT_18s0089g00340.t01
PEP Infomation

pep chromosome:12X:18:28113574:28119163:1 gene:VIT_18s0089g00340 transcript:VIT_18s0089g00340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQRSRRALLQRRALEKAIIGRSRLYKVSLSLVFVLWGLVFLLSLWISHGDGYQDGSGMPL
IGISTWDEAKQGLNLGSCSVDEHSLIETNSDNSYEGSRNDAETKDFTNELHSKGNVKSTL
PVEEGSEVEKSSSDVKSEKDTPKNDRLSRAVPPGLDEFKSKAISYKSKSVTGQAGNVIHR
VEPGGADYNYASASKGAKVLASNKEAKGASNILGKDKDKYLRNPCSAEEKFVVIELSEET
LVDTIEIANFEHYSSNPKDFELLGSSVFPTDEWVKLGNFTAANVKHAQRFALHEPKWVRY
LKLNLLSHHGTEFYCTLSVVEVYGVDAVERMLEDLISVQDNPFVPEEITAEKKSIPSQPE
PTEGNNLYQKPVSETESDPLLDKPEAIKSNMPDPVEEIRHQQVGRMPGDTVLKILMQKVQ
SLDLSLSVLERYLEDLNSRYGNIFKEFDKEIEEKDVLLENIRSDIRNFLDSKEIITKDVS
DLISWKSLVSLQLDNLLKDNALLRAEVQKVQEDQTHMENKGIAVFLICLIFGFWAFARLL
VDMMLSVYMAVSVNNRSDKSRNFCGTSSSWVFLLLSCSIIIVILSL

Transcript Sequence

Transcript ID

VIT_18s0089g00340.t01
Transcript Infomation

cdna chromosome:12X:18:28113574:28119163:1 gene:VIT_18s0089g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAAAATTCCTTGAGTCATTTTTGGCGATCCCAATGCTCCCTGTGTACAGTCGTTCAGGT
GGTGATGGATTGTTTTTTTTTAAAAAAAATTTGGAGTAATTTTTTATTAATTTATGGTTT
TTTAAGGAAAGGGCATTGGTTTTTTTTTTCATTTTTATTAGATCTGTTGTTAGATTGTTG
ACGCTTGTGTCGGATTCTCTGCGATTGAGATCTGTTTCTTTTCCTCTACAGAATTCAGTT
CATATGAGAATTTTGGGTTTTCGGAGGTGGAGGTGTTTCTCATTCTTTTACCTGCTCTGG
TTCAGCAGTAGTATGAATTGATGTACGATGCAGAGATCACGTAGAGCTCTTCTGCAACGA
AGAGCTTTAGAGAAAGCTATCATCGGCCGGAGTCGGTTGTATAAGGTTTCATTGTCTTTG
GTCTTTGTGTTGTGGGGCCTTGTCTTTCTTTTGAGCTTATGGATCAGTCATGGTGATGGA
TACCAAGATGGATCTGGCATGCCTCTCATTGGCATATCAACTTGGGATGAAGCAAAGCAG
GGCCTTAATCTAGGTTCTTGTTCTGTTGATGAACATTCTTTGATAGAAACCAATTCTGAC
AATTCTTATGAAGGTTCCAGAAATGATGCTGAAACTAAGGATTTCACCAATGAATTACAT
AGCAAAGGAAATGTAAAATCTACCTTGCCTGTTGAGGAGGGATCTGAGGTGGAGAAATCC
AGTTCAGATGTAAAATCCGAAAAGGATACCCCAAAGAATGACAGGTTATCCCGTGCTGTG
CCACCGGGCCTTGATGAATTCAAGAGCAAGGCAATTAGTTATAAAAGTAAATCTGTAACT
GGTCAGGCTGGAAACGTCATACATAGAGTAGAGCCTGGGGGTGCAGATTACAATTATGCT
TCAGCTTCAAAGGGAGCGAAGGTCTTGGCTTCTAACAAGGAAGCAAAGGGTGCTTCAAAT
ATTTTAGGCAAAGACAAGGACAAGTACCTTAGAAATCCCTGTTCTGCTGAAGAGAAATTT
GTCGTTATTGAACTTTCAGAAGAAACCTTGGTGGATACTATTGAAATTGCAAATTTTGAG
CATTACTCTTCTAATCCAAAAGATTTTGAGTTGCTGGGCAGTTCGGTTTTTCCAACAGAT
GAGTGGGTCAAGCTTGGGAATTTTACTGCTGCAAATGTGAAGCATGCTCAGAGGTTTGCT
CTTCACGAGCCAAAATGGGTGAGATATCTAAAGTTAAATCTACTGAGCCATCATGGTACA
GAATTCTATTGCACACTGAGTGTTGTGGAAGTATATGGAGTGGATGCTGTTGAGCGAATG
CTGGAGGATTTGATCTCTGTTCAAGATAATCCATTTGTACCTGAGGAAATTACTGCTGAG
AAAAAGTCAATTCCCTCCCAGCCGGAGCCCACTGAGGGTAATAATCTGTATCAGAAACCT
GTTAGTGAAACAGAATCTGACCCTCTACTTGACAAACCTGAAGCTATTAAAAGTAACATG
CCAGATCCAGTTGAAGAAATTCGTCATCAACAGGTTGGAAGGATGCCTGGGGACACTGTT
CTTAAGATACTGATGCAAAAAGTTCAATCACTTGATTTAAGTTTGTCTGTTTTGGAGCGA
TACCTGGAGGATTTGAACTCCAGATATGGTAACATTTTCAAAGAATTTGACAAAGAAATT
GAGGAGAAAGATGTTCTTCTGGAGAATATAAGATCAGACATAAGGAACTTCCTTGATAGC
AAGGAGATTATTACCAAAGATGTCAGTGATCTTATTTCATGGAAATCCCTTGTTTCCCTA
CAGTTGGATAATCTACTCAAGGACAATGCTCTTCTCAGAGCGGAGGTCCAAAAGGTTCAG
GAGGACCAGACACACATGGAGAATAAGGGTATTGCAGTGTTTCTTATATGCCTAATTTTC
GGATTCTGGGCTTTTGCGAGGCTATTGGTAGATATGATGTTGAGTGTTTACATGGCGGTG
AGTGTTAATAATAGATCAGATAAATCCAGGAATTTTTGTGGGACGAGCTCTTCCTGGGTA
TTCCTGCTATTGAGCTGTAGCATTATTATTGTGATCCTGTCATTATAATTATGGTAATAT
ATTTATATATCTATATATCAATTTTCCTCAGCCTTATTTATAAAATTATATGTGACAATG
ATTTGGGATCATGGATTCATCATACATTAAGAAACTATCAGATCATGGGTTGAATCAAAA
GATCGTATGGGTACCTTGAATAA