Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0089g00190.t01
CDS Infomation

cds chromosome:12X:18:27926186:27927923:-1 gene:VIT_18s0089g00190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTATGCTTTAGTAGAATTGGCTTCTTTTGGGGGCTTTTTCTTCTTGCAGCTCTAGCT
TGTGAAGCTAGGGTTCTTCAAAATTCAGGCTTTGTTCAAACCCGAAACACCCAATTCATC
CTGAATGGTTCCCCATTCTTCTTCAATGGATTTAACTCATACTGGTTGATGCACATCTCA
GCAGAGCCAAGCCAAAGGAATAAGGTCTCTGATGTGTTTCGACAGGCTTCAGCTGCAGGT
CTCAGTGTCTGTAGGACATGGGCATTCAGCGATGGAGGTTACCAAGCTCTGCAAATCTCT
CCCGGAGTTTATGATGAACGCGTCTTTCAGGGACTTGATTTCGTGATTTCGGAGGCAAGA
AAGAATGGAATCCGCTTAGTCTTGACTTTGAGCAACAACTACCAAGACTTTGGAGGAAGG
CCTCAGTATGTGAATTGGGCTAAAAGTGCTGGTGTCTCAGTTAACAATGATGATGACTTT
TACATTAATGCAGTCATAAAAGGTTACTATAAGAACCATGTCAAGAGAGTGATAACAAGG
GTCAATACAATCACTGGAGTTGCTTACAAAGATGACCCAACAATCATGGCATGGGAACTT
ATGAATGAACCGCGTTGTCAAATCGATTACTCTGGAAAAACCCTAAATGGATGGGTTCAA
GAAATGGCAAGCTATGTTAAATCTATTGACAACAAACACTTGTTGACAGTAGGTATGGAA
GGATTTTATGGAGATTCACTGCCAGAAAGGAAGCCAGTCAACCCCGGCTACCAAGTTGGC
ACAGATTTTATTAGCAATCATCTTATTAGGGAGATTGATTTCACAACCATACATGCATAT
CCTGATATTTGGCTGAATGGAAAGGATGATAATGCACAAATGGCTTTCTTGCAAACATGG
ACGACTAGCCACTTGACAGACTCTAGGACAATAATAAAGAAGCCAATGATTTTTGCTGAA
TTTGGAAAATCAAGCAAGGATCCAGGATATAGTATAAATGCAAGGGATTCGTTCTTGAAT
GCTGTTTATACAAACATATACAGCTCTGCGAGAAGTGGAGGAATGGGTGGCGGCTTGGTT
TGGCAGATCATGGCTGAAGGGATGGAATCATATTATGATGGATATGAGATTGTTCTATCC
AAAAATCCATCAACAAGCAGTGTCATTACTCAACAATCTAGAAGAATGGCAGCCCTTGAT
CATATGTGA

Peptide Sequence

PEP ID

VIT_18s0089g00190.t01
PEP Infomation

pep chromosome:12X:18:27926186:27927923:-1 gene:VIT_18s0089g00190 transcript:VIT_18s0089g00190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVCFSRIGFFWGLFLLAALACEARVLQNSGFVQTRNTQFILNGSPFFFNGFNSYWLMHIS
AEPSQRNKVSDVFRQASAAGLSVCRTWAFSDGGYQALQISPGVYDERVFQGLDFVISEAR
KNGIRLVLTLSNNYQDFGGRPQYVNWAKSAGVSVNNDDDFYINAVIKGYYKNHVKRVITR
VNTITGVAYKDDPTIMAWELMNEPRCQIDYSGKTLNGWVQEMASYVKSIDNKHLLTVGME
GFYGDSLPERKPVNPGYQVGTDFISNHLIREIDFTTIHAYPDIWLNGKDDNAQMAFLQTW
TTSHLTDSRTIIKKPMIFAEFGKSSKDPGYSINARDSFLNAVYTNIYSSARSGGMGGGLV
WQIMAEGMESYYDGYEIVLSKNPSTSSVITQQSRRMAALDHM

Transcript Sequence

Transcript ID

VIT_18s0089g00190.t01
Transcript Infomation

cdna chromosome:12X:18:27926186:27927923:-1 gene:VIT_18s0089g00190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACAATGGTATGCTTTAGTAGAATTGGCTTCTTTTGGGGGCTTTTTCTTCTTGCAGCTCT
AGCTTGTGAAGCTAGGGTTCTTCAAAATTCAGGCTTTGTTCAAACCCGAAACACCCAATT
CATCCTGAATGGTTCCCCATTCTTCTTCAATGGATTTAACTCATACTGGTTGATGCACAT
CTCAGCAGAGCCAAGCCAAAGGAATAAGGTCTCTGATGTGTTTCGACAGGCTTCAGCTGC
AGGTCTCAGTGTCTGTAGGACATGGGCATTCAGCGATGGAGGTTACCAAGCTCTGCAAAT
CTCTCCCGGAGTTTATGATGAACGCGTCTTTCAGGGACTTGATTTCGTGATTTCGGAGGC
AAGAAAGAATGGAATCCGCTTAGTCTTGACTTTGAGCAACAACTACCAAGACTTTGGAGG
AAGGCCTCAGTATGTGAATTGGGCTAAAAGTGCTGGTGTCTCAGTTAACAATGATGATGA
CTTTTACATTAATGCAGTCATAAAAGGTTACTATAAGAACCATGTCAAGAGAGTGATAAC
AAGGGTCAATACAATCACTGGAGTTGCTTACAAAGATGACCCAACAATCATGGCATGGGA
ACTTATGAATGAACCGCGTTGTCAAATCGATTACTCTGGAAAAACCCTAAATGGATGGGT
TCAAGAAATGGCAAGCTATGTTAAATCTATTGACAACAAACACTTGTTGACAGTAGGTAT
GGAAGGATTTTATGGAGATTCACTGCCAGAAAGGAAGCCAGTCAACCCCGGCTACCAAGT
TGGCACAGATTTTATTAGCAATCATCTTATTAGGGAGATTGATTTCACAACCATACATGC
ATATCCTGATATTTGGCTGAATGGAAAGGATGATAATGCACAAATGGCTTTCTTGCAAAC
ATGGACGACTAGCCACTTGACAGACTCTAGGACAATAATAAAGAAGCCAATGATTTTTGC
TGAATTTGGAAAATCAAGCAAGGATCCAGGATATAGTATAAATGCAAGGGATTCGTTCTT
GAATGCTGTTTATACAAACATATACAGCTCTGCGAGAAGTGGAGGAATGGGTGGCGGCTT
GGTTTGGCAGATCATGGCTGAAGGGATGGAATCATATTATGATGGATATGAGATTGTTCT
ATCCAAAAATCCATCAACAAGCAGTGTCATTACTCAACAATCTAGAAGAATGGCAGCCCT
TGATCATATGTGAGCAGGCCATGGCTAGTATGGTTTGAACCCCATGTACGGCTATCTTCA
AGAGGCTAAAGATGCAGAGTCTTAGTAATAGAAGTTTAATTGATGCTTAGAAGCTAGGGC
TTTTATTAGTTAATAAGAA