Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0086g00220.t01
CDS Infomation

cds chromosome:12X:18:17448705:17452527:-1 gene:VIT_18s0086g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCCAGAAACACCCCCACAAAACCTTCTCTGCATATCATGCTTCATCTATCTCCTC
GCCTCTTTTCTTCTTCCATGCAGTTGCAGCACTACCAGTAGTCCCACAGACAGGGGTGAT
CAAATCAAGGGAATGTTTGTGTTTGGAAGCTCTCTAGTGGACACTGGCAACAACAACTTC
CTCCAAACAACAACCAGGGCTGATTTTTTGCCTTACGGAATCGACTTCCCAGGTGGGCCT
TCTGGTAGATTCACCAATGGCAAGAACGTTGTTGACCTCATTGGCGACCACCTTCACCTT
CCTTCCATTCCTCCTTTTTCCAGTCCTGCAACAAAGGGAGCTGCAATTGTACGTGGGGTA
GACTTTGCTTCTGGAGGCTCTGGCATACTCGATACCACTGGCTCCTTTTTGGGTGAAGTG
ACAAGCCTAAACCAACAAATCAGAAACTTTGAGAAGGTGACACTGCCTGATTTGGAAGCT
CAACTGGGGGTGAAGAGCAGCGAATCACTTTCAAGCTACTTGTTTGTCGTGGGAGTTGGG
GGAAATGATATCACCTTCAACTACTTTCTGCACGCCATCAACAGCAATATCAGTCTTCAA
GCCTTCACTATCACCATGACAACCCTGCTATCTGCTCAACTCAAGAAACTGCACAGTTTG
GGAGGTCGGAAGTTTGCTTTGATGTCTGTAAATCCACTGGGGTACACCCCCATGGCTATC
CAGCTTCCAAGTAAGGTTTACGCCAATCGATTGAACCAAGCGGCTCGCCTCTTCAATTTC
CGACTCAAGTCATTGGTAGATGAAATGGAGGCTGAAATGCCTGGTTCTCAGCTTGTTCTT
GTCAACACATATCAGATTATAAATACTATCATAAAAAATCCTAAGGCCAAAGGTTTCAAG
GACACGACCAGTCCCTGTTGCGAAGTAAAATCCAGCGTTTCGAGCTCAATACTATGCAAA
AGAGGAGGGGAGGCGTGTGGAAATAGGAGCAGTTACGTGTTCTTTGATGGACTGCATCCA
ACAGAAGCAGTGAACGCCATAATAGCATCCAGGGCCTATCATTCTAATGATTCAGATCTC
GTTTATCCCACTAATATCAAACACCTTGCCAATCTCTAG

Peptide Sequence

PEP ID

VIT_18s0086g00220.t01
PEP Infomation

pep chromosome:12X:18:17448705:17452527:-1 gene:VIT_18s0086g00220 transcript:VIT_18s0086g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPETPPQNLLCISCFIYLLASFLLPCSCSTTSSPTDRGDQIKGMFVFGSSLVDTGNNNF
LQTTTRADFLPYGIDFPGGPSGRFTNGKNVVDLIGDHLHLPSIPPFSSPATKGAAIVRGV
DFASGGSGILDTTGSFLGEVTSLNQQIRNFEKVTLPDLEAQLGVKSSESLSSYLFVVGVG
GNDITFNYFLHAINSNISLQAFTITMTTLLSAQLKKLHSLGGRKFALMSVNPLGYTPMAI
QLPSKVYANRLNQAARLFNFRLKSLVDEMEAEMPGSQLVLVNTYQIINTIIKNPKAKGFK
DTTSPCCEVKSSVSSSILCKRGGEACGNRSSYVFFDGLHPTEAVNAIIASRAYHSNDSDL
VYPTNIKHLANL

Transcript Sequence

Transcript ID

VIT_18s0086g00220.t01
Transcript Infomation

cdna chromosome:12X:18:17448705:17452527:-1 gene:VIT_18s0086g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCTACACAACATGTCTCCAGAAACACCCCCACAAAACCTTCTCTGCATATCATGCTTCA
TCTATCTCCTCGCCTCTTTTCTTCTTCCATGCAGTTGCAGCACTACCAGTAGTCCCACAG
ACAGGGGTGATCAAATCAAGGGAATGTTTGTGTTTGGAAGCTCTCTAGTGGACACTGGCA
ACAACAACTTCCTCCAAACAACAACCAGGGCTGATTTTTTGCCTTACGGAATCGACTTCC
CAGGTGGGCCTTCTGGTAGATTCACCAATGGCAAGAACGTTGTTGACCTCATTGGCGACC
ACCTTCACCTTCCTTCCATTCCTCCTTTTTCCAGTCCTGCAACAAAGGGAGCTGCAATTG
TACGTGGGGTAGACTTTGCTTCTGGAGGCTCTGGCATACTCGATACCACTGGCTCCTTTT
TGGGTGAAGTGACAAGCCTAAACCAACAAATCAGAAACTTTGAGAAGGTGACACTGCCTG
ATTTGGAAGCTCAACTGGGGGTGAAGAGCAGCGAATCACTTTCAAGCTACTTGTTTGTCG
TGGGAGTTGGGGGAAATGATATCACCTTCAACTACTTTCTGCACGCCATCAACAGCAATA
TCAGTCTTCAAGCCTTCACTATCACCATGACAACCCTGCTATCTGCTCAACTCAAGAAAC
TGCACAGTTTGGGAGGTCGGAAGTTTGCTTTGATGTCTGTAAATCCACTGGGGTACACCC
CCATGGCTATCCAGCTTCCAAGTAAGGTTTACGCCAATCGATTGAACCAAGCGGCTCGCC
TCTTCAATTTCCGACTCAAGTCATTGGTAGATGAAATGGAGGCTGAAATGCCTGGTTCTC
AGCTTGTTCTTGTCAACACATATCAGATTATAAATACTATCATAAAAAATCCTAAGGCCA
AAGGTTTCAAGGACACGACCAGTCCCTGTTGCGAAGTAAAATCCAGCGTTTCGAGCTCAA
TACTATGCAAAAGAGGAGGGGAGGCGTGTGGAAATAGGAGCAGTTACGTGTTCTTTGATG
GACTGCATCCAACAGAAGCAGTGAACGCCATAATAGCATCCAGGGCCTATCATTCTAATG
ATTCAGATCTCGTTTATCCCACTAATATCAAACACCTTGCCAATCTCTAGACTTTTCTGC
TCCAAACGCATCCACCTCAATCCTAAGACGGTGAAGTACTTCTGATGTTTTGGATCTGTT
TATGCGCTTGTTTTAACGTGTTGGGTCATTCCGATGAATCTATGTAATATATATATACAT
ATGTATGGGCATTGTGTTAATGTATGATTTCCTACTTGGATTATTTAGTCTTGGTATTTG
AATGAAAGGAATTGGGTGAGGAAACCTTGATAGTTAAGATGAAATACAA