Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0075g00880.t01
CDS Infomation

cds chromosome:12X:18:22618344:22638666:1 gene:VIT_18s0075g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCATCTCCACCTTCCGTCCAAGTAAGGGACAGCATTGATCTGACGCCCAAGGAG
ACCCAGATTTTCCAGAAACTTCTCCAAGTTGTTCGCCACTTTTCTCTCCGAACTCAGCTC
CGCGTCGCCGGTGGCTGGGTCCGCGACAAGCTTCTAGGGAAGGAATGTTATGATATTGAT
ATTGCTCTGGATGACATGCTGGGCAGAGAGTTTTGTGAGAAGATCAATGATTACTTGTCA
TGTACAGGGGAGGAAAAGCAAGGAATAGGTGTTATTCAATGTAACCCTGACCAGTCCAAA
CACTTGGAAACAGCAAGGATGCGCCTTTTTGATGAATGGATTGATTTTGTAAACTTAAGG
TCTGAAGATTATAGCGAAAATAGCCGGATCCCGACAATGAGATTTGGCACTGCCAAAGAG
GATGCATACCGAAGGGATTTAACCATTAATAGCTTGTTCTACAACATCAACACCAGTTCT
GTTGAAGATTTTACTGGGAGAGGCATTGAGGATCTGAAGTCTGGAAAAATAGTTACACCA
TTACCTCCAAAGGATACATTTTTAGATGATCCCCTACGAGTTCTTCGGGCTATCCGTTTC
GGCGCCAGGTTTGGGTTCATACTAGATGAAGAGTTAAAGTTGGCTGCTGGTTGTGATGAT
GTGAGAGCTGCCATTGCGGATAAAATTAGCAGAGAACGTATTGGTCATGAAATTGATCTT
ATGATCTCTGGCAATGAGCCGGTTAAAGCAATGACATACATCTGTGATTTGCTATTATTT
TCGGTTGTCTTCAGTCTTCCTCCTATTGTTAAGCCTGCCATATCTGAAGAATGTGATAGG
CTCTGCATTGGTTACATCGATGCTGGGTGGAACCTAATACAATTAATTGGATCCTCTACT
TTCAATGATGAACAAAGAAGGCTCTATTTGTATGCGGCTTTGTTTCTTCCATTCAGAAAG
ACACTGTACGAGGGTGGCAAAGCTAGAAAGATTCCCGTTGTCAACCACATCATTCGGAAC
TCTCTTAAGCTAAGAGCTAGTGATGCTGACACGGTTGTAAGCATACACTGTGCAGTGGAG
AAATTCATTTCCTTGATTCCCTTCATTGAATCCACTGAAAGCATTCAAATTTCTGAAGCT
GAATGGGGAATTGAAATTCTTGATCTTCCTGTTACTTCAAAATTGCGAATATTGACAGGG
TTGCTTCTGCGGGAAATCAAAGGTTTTTGGCGAGTTGCCTTGATGGTGTCCACATTATTA
TACCCAAATGATATTAATCATACTCGGGATATTTCGAAGAATAACTTTCAGTTGGATAAG
AGAAGAAAGGTTTTTGAAATGGTTGAGAATGCCATTGTCGGACTAGGTCTAGAGGAAGTT
TGGGAACTGAAACCCTTGGTTAACGGGAAGGATATCATGAATGTTTTGCAGCTTAAATCT
GGAGGGCCACTCGTGAGGGATTGGCAACAAAAACTGATTCAGTGGCAGCTTGCACATCCC
TCTGGGACTGCTGAGGAATGCCTTGATTGGATGAGGCAAAAGCGGCCAAAGCGCGAGTAA

Peptide Sequence

PEP ID

VIT_18s0075g00880.t01
PEP Infomation

pep chromosome:12X:18:22618344:22638666:1 gene:VIT_18s0075g00880 transcript:VIT_18s0075g00880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSPPSVQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDID
IALDDMLGREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLR
SEDYSENSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTP
LPPKDTFLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDL
MISGNEPVKAMTYICDLLLFSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSST
FNDEQRRLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVE
KFISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLL
YPNDINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKS
GGPLVRDWQQKLIQWQLAHPSGTAEECLDWMRQKRPKRE

Transcript Sequence

Transcript ID

VIT_18s0075g00880.t01
Transcript Infomation

cdna chromosome:12X:18:22618344:22638666:1 gene:VIT_18s0075g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCATCTCCACCTTCCGTCCAAGTAAGGGACAGCATTGATCTGACGCCCAAGGAG
ACCCAGATTTTCCAGAAACTTCTCCAAGTTGTTCGCCACTTTTCTCTCCGAACTCAGCTC
CGCGTCGCCGGTGGCTGGGTCCGCGACAAGCTTCTAGGGAAGGAATGTTATGATATTGAT
ATTGCTCTGGATGACATGCTGGGCAGAGAGTTTTGTGAGAAGATCAATGATTACTTGTCA
TGTACAGGGGAGGAAAAGCAAGGAATAGGTGTTATTCAATGTAACCCTGACCAGTCCAAA
CACTTGGAAACAGCAAGGATGCGCCTTTTTGATGAATGGATTGATTTTGTAAACTTAAGG
TCTGAAGATTATAGCGAAAATAGCCGGATCCCGACAATGAGATTTGGCACTGCCAAAGAG
GATGCATACCGAAGGGATTTAACCATTAATAGCTTGTTCTACAACATCAACACCAGTTCT
GTTGAAGATTTTACTGGGAGAGGCATTGAGGATCTGAAGTCTGGAAAAATAGTTACACCA
TTACCTCCAAAGGATACATTTTTAGATGATCCCCTACGAGTTCTTCGGGCTATCCGTTTC
GGCGCCAGGTTTGGGTTCATACTAGATGAAGAGTTAAAGTTGGCTGCTGGTTGTGATGAT
GTGAGAGCTGCCATTGCGGATAAAATTAGCAGAGAACGTATTGGTCATGAAATTGATCTT
ATGATCTCTGGCAATGAGCCGGTTAAAGCAATGACATACATCTGTGATTTGCTATTATTT
TCGGTTGTCTTCAGTCTTCCTCCTATTGTTAAGCCTGCCATATCTGAAGAATGTGATAGG
CTCTGCATTGGTTACATCGATGCTGGGTGGAACCTAATACAATTAATTGGATCCTCTACT
TTCAATGATGAACAAAGAAGGCTCTATTTGTATGCGGCTTTGTTTCTTCCATTCAGAAAG
ACACTGTACGAGGGTGGCAAAGCTAGAAAGATTCCCGTTGTCAACCACATCATTCGGAAC
TCTCTTAAGCTAAGAGCTAGTGATGCTGACACGGTTGTAAGCATACACTGTGCAGTGGAG
AAATTCATTTCCTTGATTCCCTTCATTGAATCCACTGAAAGCATTCAAATTTCTGAAGCT
GAATGGGGAATTGAAATTCTTGATCTTCCTGTTACTTCAAAATTGCGAATATTGACAGGG
TTGCTTCTGCGGGAAATCAAAGGTTTTTGGCGAGTTGCCTTGATGGTGTCCACATTATTA
TACCCAAATGATATTAATCATACTCGGGATATTTCGAAGAATAACTTTCAGTTGGATAAG
AGAAGAAAGGTTTTTGAAATGGTTGAGAATGCCATTGTCGGACTAGGTCTAGAGGAAGTT
TGGGAACTGAAACCCTTGGTTAACGGGAAGGATATCATGAATGTTTTGCAGCTTAAATCT
GGAGGGCCACTCGTGAGGGATTGGCAACAAAAACTGATTCAGTGGCAGCTTGCACATCCC
TCTGGGACTGCTGAGGAATGCCTTGATTGGATGAGGCAAAAGCGGCCAAAGCGCGAGTAA
CTTGTCAACTGCTTTCACCTTTTTGTGGAACCCTAATCTCATCTGAGGCAAAGGACTGTT
TCTGAAGTCTCTACCTTTTCTTGGAGGGTCTTGAAGCTAGGCTACGAATTGAAACCCCAG
CAGCATGGCATCCCTGCCAAAGTGGATTGTACATATTCACATTTTTGCAGCAGTATAACT
TAGTCGTCATTTCATTAGCCATTTTGTTAGTGTGTCATTTCTTAATCATAATCAACTTTG
TAGTAACAATTTATTTATTGTATAATTTGGAATTCCAAGTATATATATTAAATGAAAGCT
CCTTGACGAGATTAAT