Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0075g00520.t01
CDS Infomation

cds chromosome:12X:18:22019853:22023384:-1 gene:VIT_18s0075g00520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAGAAAAGGGAGGAATTCTTCTTGAAGAATGGAAGCTTGTTATTAGAGAAGCTG
GTTTCATCTTTGAATGGCAGGTCCAATCCCATCCGGAACTTCTCTATCAAAGAGCTGGAG
CAAGCCACAAACAAATATAATAGCTCTCTAATTTTTGACCGGTGGACGTATTCTGAATGG
TACAAGGGTTCTCTTGAAGGCAGATTCGTTTCCGTTAGGAAGTTTCATCCTGTGATTGAC
GATGCTTTTCTTGAGAGGGTCATCAAGGAAATTACCTTTGCAACACAACTGAGCGCTCAC
AAGAATGTTTTGAAGCTCTTCGGATGCTGCTTGGAGACCCAGACTCCCGTTCTGGTTTAC
GAATATCCGGTCAATGGAGTGGTGCCTCTCTATGATGTGATACATCCTTCTACAGATGGA
AAAAGTAGGCAGCGTTTGCCATGGAAAAGTAGGTTAAGGATTTCAGGTGACATTGCTCAT
GTTATTGCATATCTCCACACTGCATTTCCGAGGGCTATCATTCATAGAGAGGTAACGCTT
TCATTCTTCTTCTTGGATGAGGATTGTGTTCCCAAACTGTCCAATTTCTTCTTTGCTATA
GCTCTTCCTGAGGGGAGAAAATATGTGGTGGATGGAGTGATGGGCATAGAGGGGTTCATA
GCACCTGAGTATGAGATGACAGGAATGGTCACAGAGAAAGTAGATGTTTTTAGTTTTGGT
AAACTTCTTCTGGAGCTTTTAACTGGCAGGAGGACCATTGATTTTGGGCCTTTGGGTAAT
GATGGGGAACTTCTTCTTCAGGATTGCATAAAAACATATGTAGAAGACCATGAACTTGAT
GGTTTTGTGGATGCTAGTATTCTGCCAAGAGGAGGAGAGATCCATGAGGAACTCCAACTC
CTAGCAGTAACAAAACTTGCCCTGAGATGCATCATGACTGCTGCTGAGCAGAGGCCAACC
ATGGTGGAGATTGCAAAAGAACTCAGGCGAATTCAGAGAGGCATCTGCTCAAACGTGACT
TTGACACCAACTTCATCAATCTCCCCTACTGCTTCCATGATTCAGATGGCAAACCCTCTA
AATCAGTTGATTGATGTGAAATTGGACGTTACAAACTACCCCATATGGAAACGTCAAGTT
CAGACTGCAATTAGGGGTTATGGCCTTGAAGGTTTCATCCTCGGGACTCGAGAAGTTCCT
CCTGAGCTTATTCAAGTTGAAGACGGCACACAGATGGTGAATCCAGCCTATATTTCCTAT
CAACAACAAGATCACCTTCTTGCATCATGGATTCTCGCTTCAATGAGTCCAAGCTTCCTG
CCACAACTAGTTGGCTGTGATACTGCCCTAGATATCTGGAATACTGTTGGGCACATCTTT
ACTTCTCAATCCACAGCAAAGATCATGCACTACAAGCATCAACTTCAAATTCTGAAGAAA
GGTAGCCTCCCAATGGTCTACAGTACTAAGGAGGCTGAGATTCTACAAACTTAG

Peptide Sequence

PEP ID

VIT_18s0075g00520.t01
PEP Infomation

pep chromosome:12X:18:22019853:22023384:-1 gene:VIT_18s0075g00520 transcript:VIT_18s0075g00520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKKREEFFLKNGSLLLEKLVSSLNGRSNPIRNFSIKELEQATNKYNSSLIFDRWTYSEW
YKGSLEGRFVSVRKFHPVIDDAFLERVIKEITFATQLSAHKNVLKLFGCCLETQTPVLVY
EYPVNGVVPLYDVIHPSTDGKSRQRLPWKSRLRISGDIAHVIAYLHTAFPRAIIHREVTL
SFFFLDEDCVPKLSNFFFAIALPEGRKYVVDGVMGIEGFIAPEYEMTGMVTEKVDVFSFG
KLLLELLTGRRTIDFGPLGNDGELLLQDCIKTYVEDHELDGFVDASILPRGGEIHEELQL
LAVTKLALRCIMTAAEQRPTMVEIAKELRRIQRGICSNVTLTPTSSISPTASMIQMANPL
NQLIDVKLDVTNYPIWKRQVQTAIRGYGLEGFILGTREVPPELIQVEDGTQMVNPAYISY
QQQDHLLASWILASMSPSFLPQLVGCDTALDIWNTVGHIFTSQSTAKIMHYKHQLQILKK
GSLPMVYSTKEAEILQT

Transcript Sequence

Transcript ID

VIT_18s0075g00520.t01
Transcript Infomation

cdna chromosome:12X:18:22019853:22023384:-1 gene:VIT_18s0075g00520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAAACAAAGAAGCTGATGGCCAAGAAAAGGGAGGAATTCTTCTTGAAGAATGGAAGCT
TGTTATTAGAGAAGCTGGTTTCATCTTTGAATGGCAGGTCCAATCCCATCCGGAACTTCT
CTATCAAAGAGCTGGAGCAAGCCACAAACAAATATAATAGCTCTCTAATTTTTGACCGGT
GGACGTATTCTGAATGGTACAAGGGTTCTCTTGAAGGCAGATTCGTTTCCGTTAGGAAGT
TTCATCCTGTGATTGACGATGCTTTTCTTGAGAGGGTCATCAAGGAAATTACCTTTGCAA
CACAACTGAGCGCTCACAAGAATGTTTTGAAGCTCTTCGGATGCTGCTTGGAGACCCAGA
CTCCCGTTCTGGTTTACGAATATCCGGTCAATGGAGTGGTGCCTCTCTATGATGTGATAC
ATCCTTCTACAGATGGAAAAAGTAGGCAGCGTTTGCCATGGAAAAGTAGGTTAAGGATTT
CAGGTGACATTGCTCATGTTATTGCATATCTCCACACTGCATTTCCGAGGGCTATCATTC
ATAGAGAGGTAACGCTTTCATTCTTCTTCTTGGATGAGGATTGTGTTCCCAAACTGTCCA
ATTTCTTCTTTGCTATAGCTCTTCCTGAGGGGAGAAAATATGTGGTGGATGGAGTGATGG
GCATAGAGGGGTTCATAGCACCTGAGTATGAGATGACAGGAATGGTCACAGAGAAAGTAG
ATGTTTTTAGTTTTGGTAAACTTCTTCTGGAGCTTTTAACTGGCAGGAGGACCATTGATT
TTGGGCCTTTGGGTAATGATGGGGAACTTCTTCTTCAGGATTGCATAAAAACATATGTAG
AAGACCATGAACTTGATGGTTTTGTGGATGCTAGTATTCTGCCAAGAGGAGGAGAGATCC
ATGAGGAACTCCAACTCCTAGCAGTAACAAAACTTGCCCTGAGATGCATCATGACTGCTG
CTGAGCAGAGGCCAACCATGGTGGAGATTGCAAAAGAACTCAGGCGAATTCAGAGAGGCA
TCTGCTCAAACGTGACTTTGACACCAACTTCATCAATCTCCCCTACTGCTTCCATGATTC
AGATGGCAAACCCTCTAAATCAGTTGATTGATGTGAAATTGGACGTTACAAACTACCCCA
TATGGAAACGTCAAGTTCAGACTGCAATTAGGGGTTATGGCCTTGAAGGTTTCATCCTCG
GGACTCGAGAAGTTCCTCCTGAGCTTATTCAAGTTGAAGACGGCACACAGATGGTGAATC
CAGCCTATATTTCCTATCAACAACAAGATCACCTTCTTGCATCATGGATTCTCGCTTCAA
TGAGTCCAAGCTTCCTGCCACAACTAGTTGGCTGTGATACTGCCCTAGATATCTGGAATA
CTGTTGGGCACATCTTTACTTCTCAATCCACAGCAAAGATCATGCACTACAAGCATCAAC
TTCAAATTCTGAAGAAAGGTAGCCTCCCAATGGTCTACAGTACTAAGGAGGCTGAGATTC
TACAAACTTAGCTATGCAACAGAAAAAGAAGTTTCAAGGTGGAGGTGGAATTCAGTTCTA
CAATAATAAGACTTATTAAGGTGAAGATCAAGTTTCTGGTGGTCCTAATAGTCGTGGCAC
TGACAAAAGCAAGTCCAGGGATAATAATAAACCTCAGTGTCAATTGTGTGGCAAAATGGG
ACATACAGTGCACCAGTGCCGCTACAGGTTTGACATCTCTTTCACCAGATTGAGCAATGA
TAATGACCAAACTAATGGTGCTTCTACCTCATCTAGCTAGTGTTTGTGATAGTAATTTAC
AACCAGACAACAATAACTCCATGATTGTCATTGTACCAACACTTGATGACTGCTGGTATC
TTGATTCAGGCGCCACTAATCATGTTATTAGTGACTTGAACGACCTTTCATTTGGATCCA
ACAACCATGGTACCAACAAGATTCACATCAGAAATGGTGCTGGTTTGGTTATTTCAAATG
TTGGTCATTACTTTTTTCCAGTCCCACTTCTAAATCTAAAGCTTTATTCCT