Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g01180.t01
CDS Infomation

cds chromosome:12X:18:20839866:20855179:-1 gene:VIT_18s0072g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGGTCAGCTTGCAGCATTTGGTTATGTATTAAGTGACAATCCTGAGGAGGCAGAC
TTGTGGCTGATAAACACGTGCACAGTTAAGTCCCCAAGTCAGTCTGCTATGGACACCCTA
ATAACTAAAGGTAGAAGTTCAAAAAAGCCTCTGGTAGTGGCAGGGTGTGTTCCTCAAGGA
AGTAGAGACTTGAAAGAGCTAGAAGGAGTCAGTATAGTTGGAGTCCAGCAAATTGACCGT
GTGGTTGAGGTTGTAGAAGAGACTTTAAAAGGTCATGAGGTGCGACTTTTGAACCGCAAG
ACGCTGCCAGCACTCGACCTCCCAAAGGTGAGAAAGAACAAGTTTGTTGAGATTCTTCCA
ATTAATGTTGGTTGTTTAGGTGCTTGCACTTATTGCAAGACAAAGCATGCTCGTGGTCAT
TTAGGAAGCTACACTGTTGACAGCCTTGTAGGGCGTGTAAGAACAGTTATAGCTGATGGA
GTGAAGGAGATATGGTTGAGTAGTGAAGATACTGGAGCATATGGTCGTGACATTGGGGTT
ACTCTTCCAATTTTGTTGAATGCTATTGTTTCTGAACTTCCCCCTGATGGGGGCACAATG
CTTCGCATTGGAATGACTAATCCTCCTTATATTCTGGAGCACTTGAAAGAGATGGCAGTT
GTTTTGCGTCACCCGTGTGTATACTCCTTTCTTCATGTACCAGTCCAATCTGGGAGTGAT
GCCATCTTGAGTGCTATGAATCGAGAGTATACTGTAACTGAGTTCAGGACTGTGGTAGAC
ACCTTGACTGAACTTGTTCCAGGAATGCAGATTGCAACTGATATAATATGCGGTTTTCCT
GGTGAAACAGATGAAGAATTTGCTCAAACAGTCAGCCTCATACAGGAGTATAGGTTCCCC
CAAGTTCATATTTCTCAATTCTATCCTCGGCCTGGGACACCTGCGGCCAGGATGAAAAAG
GTCCCAAGTGCTGTAGTGAAGAAACGGAGTCGTGAATTGACTTCTATTTTTGAAGCTTTT
ACACCATATAATGGAATGGAAGGCAGAGTGGAAAGAATATGGATAAGTGAAATTGCAACT
GATGGAATTCACCTGGTTGGCCATACGAAGGGATATATGCAGGTGCTTGTGGTTGCACCA
CGAAGCCTGATGGGAACGTCAGCTATTGTGAAAATAACATCTGTGGGAAGGTGGTCGGTT
TTCGGAGAACTGATTGAGACTCTCAACCAAGTAAATGATAATATATCTTTGAATGAGGAA
AAGTTCAGTCTGGGCAAATGTTCTCCCTGCTCTGTCCCAGGTGAAATTTGTGCGTGTTCA
AGGGAGGCAGAACCTTGTGCTTGTGAACCACAAAGCTGTGAAGGAAAAATTAGTATGGAG
GAAGGCTCTGTTTCAAGGAAGGACATGTTGCCAGAAAATCAAAACCTATTCAAATGGCTA
CTAAGGAGGCGGAAGAACCACGGACAGAAAAGGATAGAGAATGGAATTGCATGGGGATCC
AAGGAAAAGGAAGAACGTGACCGAGGATGCATGAACCATTGGGGTCTAGTTGATAGGGTT
CTTCTGGGTGGAATATTTGGAATCCTCCAGAGAGATTGCTCATATATGCTTTTCCATTAT
ATACACCTTGAAGTAAGCTTTTCAATATAA

Peptide Sequence

PEP ID

VIT_18s0072g01180.t01
PEP Infomation

pep chromosome:12X:18:20839866:20855179:-1 gene:VIT_18s0072g01180 transcript:VIT_18s0072g01180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGQLAAFGYVLSDNPEEADLWLINTCTVKSPSQSAMDTLITKGRSSKKPLVVAGCVPQG
SRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKNKFVEILP
INVGCLGACTYCKTKHARGHLGSYTVDSLVGRVRTVIADGVKEIWLSSEDTGAYGRDIGV
TLPILLNAIVSELPPDGGTMLRIGMTNPPYILEHLKEMAVVLRHPCVYSFLHVPVQSGSD
AILSAMNREYTVTEFRTVVDTLTELVPGMQIATDIICGFPGETDEEFAQTVSLIQEYRFP
QVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSIFEAFTPYNGMEGRVERIWISEIAT
DGIHLVGHTKGYMQVLVVAPRSLMGTSAIVKITSVGRWSVFGELIETLNQVNDNISLNEE
KFSLGKCSPCSVPGEICACSREAEPCACEPQSCEGKISMEEGSVSRKDMLPENQNLFKWL
LRRRKNHGQKRIENGIAWGSKEKEERDRGCMNHWGLVDRVLLGGIFGILQRDCSYMLFHY
IHLEVSFSI

Transcript Sequence

Transcript ID

VIT_18s0072g01180.t01
Transcript Infomation

cdna chromosome:12X:18:20839866:20855179:-1 gene:VIT_18s0072g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGAGCGACAGTGAATATATGGCAGGTCAGCTTGCAGCATTTGGTTATGTATTAAGTGAC
AATCCTGAGGAGGCAGACTTGTGGCTGATAAACACGTGCACAGTTAAGTCCCCAAGTCAG
TCTGCTATGGACACCCTAATAACTAAAGGTAGAAGTTCAAAAAAGCCTCTGGTAGTGGCA
GGGTGTGTTCCTCAAGGAAGTAGAGACTTGAAAGAGCTAGAAGGAGTCAGTATAGTTGGA
GTCCAGCAAATTGACCGTGTGGTTGAGGTTGTAGAAGAGACTTTAAAAGGTCATGAGGTG
CGACTTTTGAACCGCAAGACGCTGCCAGCACTCGACCTCCCAAAGGTGAGAAAGAACAAG
TTTGTTGAGATTCTTCCAATTAATGTTGGTTGTTTAGGTGCTTGCACTTATTGCAAGACA
AAGCATGCTCGTGGTCATTTAGGAAGCTACACTGTTGACAGCCTTGTAGGGCGTGTAAGA
ACAGTTATAGCTGATGGAGTGAAGGAGATATGGTTGAGTAGTGAAGATACTGGAGCATAT
GGTCGTGACATTGGGGTTACTCTTCCAATTTTGTTGAATGCTATTGTTTCTGAACTTCCC
CCTGATGGGGGCACAATGCTTCGCATTGGAATGACTAATCCTCCTTATATTCTGGAGCAC
TTGAAAGAGATGGCAGTTGTTTTGCGTCACCCGTGTGTATACTCCTTTCTTCATGTACCA
GTCCAATCTGGGAGTGATGCCATCTTGAGTGCTATGAATCGAGAGTATACTGTAACTGAG
TTCAGGACTGTGGTAGACACCTTGACTGAACTTGTTCCAGGAATGCAGATTGCAACTGAT
ATAATATGCGGTTTTCCTGGTGAAACAGATGAAGAATTTGCTCAAACAGTCAGCCTCATA
CAGGAGTATAGGTTCCCCCAAGTTCATATTTCTCAATTCTATCCTCGGCCTGGGACACCT
GCGGCCAGGATGAAAAAGGTCCCAAGTGCTGTAGTGAAGAAACGGAGTCGTGAATTGACT
TCTATTTTTGAAGCTTTTACACCATATAATGGAATGGAAGGCAGAGTGGAAAGAATATGG
ATAAGTGAAATTGCAACTGATGGAATTCACCTGGTTGGCCATACGAAGGGATATATGCAG
GTGCTTGTGGTTGCACCACGAAGCCTGATGGGAACGTCAGCTATTGTGAAAATAACATCT
GTGGGAAGGTGGTCGGTTTTCGGAGAACTGATTGAGACTCTCAACCAAGTAAATGATAAT
ATATCTTTGAATGAGGAAAAGTTCAGTCTGGGCAAATGTTCTCCCTGCTCTGTCCCAGGT
GAAATTTGTGCGTGTTCAAGGGAGGCAGAACCTTGTGCTTGTGAACCACAAAGCTGTGAA
GGAAAAATTAGTATGGAGGAAGGCTCTGTTTCAAGGAAGGACATGTTGCCAGAAAATCAA
AACCTATTCAAATGGCTACTAAGGAGGCGGAAGAACCACGGACAGAAAAGGATAGAGAAT
GGAATTGCATGGGGATCCAAGGAAAAGGAAGAACGTGACCGAGGATGCATGAACCATTGG
GGTCTAGTTGATAGGGTTCTTCTGGGTGGAATATTTGGAATCCTCCAGAGAGATTGCTCA
TATATGCTTTTCCATTATATACACCTTGAAGTAAGCTTTTCAATATAATTGTATTTGGGA
ACGGCTTTATTGCATATGCACTTG