Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g01080.t01
CDS Infomation

cds chromosome:12X:18:20620084:20633488:-1 gene:VIT_18s0072g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCCGAAGCAGCAAAACCAGGAAGCACAGACACTCGTCGTCCGACGACGACGACGGT
GATGACACGGCCAATTCTTCTTCCTCGTCACCATCCCCGTCAACCTCTCACAAGCGACGC
CGCCGGAGAAAAGAGAGAAACGAACGTTCCAAGAGGAAGAGAGAGTCGAAGCATCGGAGA
TCGCGTAGAGACCGCAGAAAACGGGTTTCTGAGTCCGAAGATGGTTCCAGATCTTCCACC
GACGAAGATTCGGAGCTCCGGAGGTCTAGGGTCGAGCCCAGGGCCGTTGTGAGGTATATT
TTGAAGAAGTTCCCTGGCGTGGCCACTGATTTGGAGCAGCTTCTGCAAATGATTGATGAT
GGGCAAGCGGTCGACATCAAGGGATTATCGGAAAGATCTTTGATAAAGCATCTAAAGAAG
TTATTCCTCTCATTAAACCTCAAGGAAAATGGTGATAGAGTTTTTCTACTGCCTTCAAAA
GTTCGTCCTACTTTGGAGGTTGTTGGACCCATGCTTCAGTCTAACATAGAACCTAAAGAG
GAGCAGCTTGGTCATGTGCCTAATGATAAACTTTCATTACCACCTGAGGTAGAAGGAGGA
CAAGTGCTGGATGAGAATGATATGGTAGTACAGTGTCCAAAGGTTGATGCTTCACCTCCA
AAAAGAAGGGTGATTGGCCCTGAAATGCCATCTGCTGAATTACTTGCTGCTGCAGCCAAA
TTAACAGAAGCAGGGGCTGAGCTAAGGGAAGTGGAATTTGATGAAGATAGTGAAATATTT
ATAGGACCTCCTCCACCTGCTGTGGTTGCTGAAGCTGAATCAGCAAATGAAGCTGAGCGG
TTTGAAGAGGTCACTAGGATTATGGGCGTTGAGACTGACAGCCCATATGATGTTCTAGGA
GTGAACCTAAATATGTCTGTTGACAACGTAAAGAAAAGGTACTGGAAGCTGTCTCTCATG
GTGCATCCCGACAAATGCCCTCATCCTCAAGCTCATCAAGCATTCATCATATTGAATAAA
GCTTTTAAAGATTTACAGGACCCAGATAAGCGAAAAGCACTGGATGAGAAAATTAAACTG
AAGGAGGAACAGGAGGCATTTAAGGCGGAGTTGAAAGCCATGCGCGAGGCTGCACATTGG
AGAAGATTGCAAGGTATATCCATGGAGGGGGATGATGAGCTCCTGGCAGACATGGAGGTG
AAAGTAGAACCAAAAAGAGATGAGTGGATGACAACTCTACCTCCAGAAAGAAAACCCGGT
ATGACCATGCAGTCCACAAAGTTTAGCAGAAGCTCTAAGGAAGGACGTGGTGATACTAGT
GTTTGGACTGATACTCCTTCAGACAGAGCTCAGAAAGCAAAGATCAATTATTTAGAAGCG
TATAATGAGGCTGCAGCACTTGCTTCAAATGAAATAGAAAAGAAAAGAACAAGTAGTGAT
GCAGATTTGGTGGACAAATACAATAAAGCCAAACGATCAAAGTCATTGGTGCAGAAGCAC
CACGAAGAGGCTGCTAGTAAAGGGTCAAAGCGGAAAGCAAAGCAGCAGCCACAGCTGGAG
AAAGAAGAATGGGTGGGACAACACCCTTGGAAACCTTGGGATCGTGAGAAGGACTTGACG
GCTGGGCGGCAAAGTGTGAAATTGGATGCAGATAACATGGCTGAGGGTTTGGCTTCAAGG
TTTTCTTCAGGAAACTTTCAAAGGAACTTCCTATAG

Peptide Sequence

PEP ID

VIT_18s0072g01080.t01
PEP Infomation

pep chromosome:12X:18:20620084:20633488:-1 gene:VIT_18s0072g01080 transcript:VIT_18s0072g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRSSKTRKHRHSSSDDDDGDDTANSSSSSPSPSTSHKRRRRRKERNERSKRKRESKHRR
SRRDRRKRVSESEDGSRSSTDEDSELRRSRVEPRAVVRYILKKFPGVATDLEQLLQMIDD
GQAVDIKGLSERSLIKHLKKLFLSLNLKENGDRVFLLPSKVRPTLEVVGPMLQSNIEPKE
EQLGHVPNDKLSLPPEVEGGQVLDENDMVVQCPKVDASPPKRRVIGPEMPSAELLAAAAK
LTEAGAELREVEFDEDSEIFIGPPPPAVVAEAESANEAERFEEVTRIMGVETDSPYDVLG
VNLNMSVDNVKKRYWKLSLMVHPDKCPHPQAHQAFIILNKAFKDLQDPDKRKALDEKIKL
KEEQEAFKAELKAMREAAHWRRLQGISMEGDDELLADMEVKVEPKRDEWMTTLPPERKPG
MTMQSTKFSRSSKEGRGDTSVWTDTPSDRAQKAKINYLEAYNEAAALASNEIEKKRTSSD
ADLVDKYNKAKRSKSLVQKHHEEAASKGSKRKAKQQPQLEKEEWVGQHPWKPWDREKDLT
AGRQSVKLDADNMAEGLASRFSSGNFQRNFL

Transcript Sequence

Transcript ID

VIT_18s0072g01080.t01
Transcript Infomation

cdna chromosome:12X:18:20620084:20633488:-1 gene:VIT_18s0072g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAGTTAAGAGAAGTGAACCTCAAACCCGAAACTCGACGTCGATGGGCCGAAGCAGCAAA
ACCAGGAAGCACAGACACTCGTCGTCCGACGACGACGACGGTGATGACACGGCCAATTCT
TCTTCCTCGTCACCATCCCCGTCAACCTCTCACAAGCGACGCCGCCGGAGAAAAGAGAGA
AACGAACGTTCCAAGAGGAAGAGAGAGTCGAAGCATCGGAGATCGCGTAGAGACCGCAGA
AAACGGGTTTCTGAGTCCGAAGATGGTTCCAGATCTTCCACCGACGAAGATTCGGAGCTC
CGGAGGTCTAGGGTCGAGCCCAGGGCCGTTGTGAGGTATATTTTGAAGAAGTTCCCTGGC
GTGGCCACTGATTTGGAGCAGCTTCTGCAAATGATTGATGATGGGCAAGCGGTCGACATC
AAGGGATTATCGGAAAGATCTTTGATAAAGCATCTAAAGAAGTTATTCCTCTCATTAAAC
CTCAAGGAAAATGGTGATAGAGTTTTTCTACTGCCTTCAAAAGTTCGTCCTACTTTGGAG
GTTGTTGGACCCATGCTTCAGTCTAACATAGAACCTAAAGAGGAGCAGCTTGGTCATGTG
CCTAATGATAAACTTTCATTACCACCTGAGGTAGAAGGAGGACAAGTGCTGGATGAGAAT
GATATGGTAGTACAGTGTCCAAAGGTTGATGCTTCACCTCCAAAAAGAAGGGTGATTGGC
CCTGAAATGCCATCTGCTGAATTACTTGCTGCTGCAGCCAAATTAACAGAAGCAGGGGCT
GAGCTAAGGGAAGTGGAATTTGATGAAGATAGTGAAATATTTATAGGACCTCCTCCACCT
GCTGTGGTTGCTGAAGCTGAATCAGCAAATGAAGCTGAGCGGTTTGAAGAGGTCACTAGG
ATTATGGGCGTTGAGACTGACAGCCCATATGATGTTCTAGGAGTGAACCTAAATATGTCT
GTTGACAACGTAAAGAAAAGGTACTGGAAGCTGTCTCTCATGGTGCATCCCGACAAATGC
CCTCATCCTCAAGCTCATCAAGCATTCATCATATTGAATAAAGCTTTTAAAGATTTACAG
GACCCAGATAAGCGAAAAGCACTGGATGAGAAAATTAAACTGAAGGAGGAACAGGAGGCA
TTTAAGGCGGAGTTGAAAGCCATGCGCGAGGCTGCACATTGGAGAAGATTGCAAGGTATA
TCCATGGAGGGGGATGATGAGCTCCTGGCAGACATGGAGGTGAAAGTAGAACCAAAAAGA
GATGAGTGGATGACAACTCTACCTCCAGAAAGAAAACCCGGTATGACCATGCAGTCCACA
AAGTTTAGCAGAAGCTCTAAGGAAGGACGTGGTGATACTAGTGTTTGGACTGATACTCCT
TCAGACAGAGCTCAGAAAGCAAAGATCAATTATTTAGAAGCGTATAATGAGGCTGCAGCA
CTTGCTTCAAATGAAATAGAAAAGAAAAGAACAAGTAGTGATGCAGATTTGGTGGACAAA
TACAATAAAGCCAAACGATCAAAGTCATTGGTGCAGAAGCACCACGAAGAGGCTGCTAGT
AAAGGGTCAAAGCGGAAAGCAAAGCAGCAGCCACAGCTGGAGAAAGAAGAATGGGTGGGA
CAACACCCTTGGAAACCTTGGGATCGTGAGAAGGACTTGACGGCTGGGCGGCAAAGTGTG
AAATTGGATGCAGATAACATGGCTGAGGGTTTGGCTTCAAGGTTTTCTTCAGGAAACTTT
CAAAGGAACTTCCTATAGGCAATCTATATCAATATCAGTTTTGTTTTTGTACTTCAACAA
TCTTGTTTGCCCTCCTTGGATGCATCTTTCCATAGAAATCCAGTTGTTGGGCCTTACGTA
TTTCCATGTATTGGTTGCTTACATCTTGGAACAGGCTTCTTATCATAAGTATTACTGTAT
TATCTCA